KEGG T07438: 116171474

Photinus pyralis (common eastern firefly): 116171474

Entry

116171474         CDS       T07438

Name

(RefSeq) DNA-directed RNA polymerase II subunit RPB3-like

K03011

DNA-directed RNA polymerase II subunit RPB3

Organism

ppyr Photinus pyralis (common eastern firefly)

Pathway

ppyr03020

RNA polymerase

ppyr03420

Nucleotide excision repair

Brite

KEGG Orthology (KO) [BR:ppyr00001]
09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    116171474
  09124 Replication and repair
   03420 Nucleotide excision repair
    116171474
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ppyr03021]
    116171474
   03400 DNA repair and recombination proteins [BR:ppyr03400]
    116171474
Transcription machinery [BR:ppyr03021]
Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     116171474
DNA repair and recombination proteins [BR:ppyr03400]
Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      116171474

SSDB

Motif

Pfam:

RNA_pol_A_bac RNA_pol_L

Other DBs

NCBI-GeneID:

116171474

NCBI-ProteinID:

XP_031344196

LinkDB

Position

Unknown

AA seq 274 aa
MPYANQPSVHITDLTDENVKFYIEDTELSVANSMRRVFIAETPTLAIDWVKLEANSTVLS
DEFLAHRIGLIPLISDEVVQRLHYPRDCICPDFCHNCSVEFTLDVKCTDDQTRHVTTADL
KSSDPRVLPVTSKHRDDDSSEYGETDEILLIKLRKGQELKMRAYAKKGFGKEHAKWNPTA
GVCFEYDPDNAMRHTLYPKPDEWPKSEYTELDDDQYEATFNWETKPNKFFFNVESSGALK
PENIVIMGIAMLKDKLSNLQTQLSHELQTDALAI

NT seq 825 nt +upstreamnt +downstreamnt
atgccgtacgcaaatcagccatctgtacatataactgatttaacagatgaaaatgtgaag
ttttacatcgaagatacagaactgagcgttgcgaatagcatgcgtagagtctttattgcg
gaaaccccaactttagcaatagattgggttaaactggaagccaattctactgttctgagt
gatgaatttttagcgcatcgcattggtttaataccgctaatatctgatgaagttgtgcaa
cggttacattatcccagggactgtatttgtccagatttttgtcataattgtagtgtggaa
tttacgttagatgtcaaatgcactgatgatcaaacgcggcatgttacgactgctgatctt
aaatcgagcgatcctcgagttttacctgttacatcaaaacatcgagatgacgactcatca
gagtatggagaaacggacgagatacttttaattaagttacgtaaaggccaagaattaaaa
atgagggcgtatgctaaaaaagggtttggaaaagaacacgccaagtggaatcccacagct
ggtgtttgttttgaatacgatccggacaatgctatgaggcatactttatatcctaaacca
gacgagtggccgaagagcgaatataccgaattagacgatgaccaatatgaggcaactttt
aattgggagacaaagccaaataaattcttctttaacgtggaatcttcaggagctttgaaa
ccagagaatattgtcattatgggtatagcgatgttgaaagataaactatctaatttacag
acgcagctcagtcatgagttacaaactgatgctctagccatttaa

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