Pseudomonas qingdaonensis: KH389_25135
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Entry
KH389_25135 CDS
T07622
Symbol
dgcB
Name
(GenBank) dimethylglycine demethylation protein DgcB
KO
K21834
N,N-dimethylglycine/sarcosine dehydrogenase ferredoxin subunit
Organism
pqi
Pseudomonas qingdaonensis
Pathway
pqi00260
Glycine, serine and threonine metabolism
pqi01100
Metabolic pathways
Module
pqi_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pqi00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
KH389_25135 (dgcB)
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Gene cluster
GFIT
Motif
Pfam:
DUF3483
CCG
Fer4_10
Fer4_8
Fer4_9
Fer4_17
Fer4_2
Fer4_6
Fer4_16
Fer4
Fer4_4
Fer4_7
Fer4_21
Fer4_22
Fer4_3
Motif
Other DBs
NCBI-ProteinID:
QVL18615
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All DBs
Position
complement(5481992..5483941)
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AA seq
649 aa
AA seq
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MLNTLLPLLLFAALGLAVLGALRRVRMWRQGRPSRVELLKGLLAMPRRYMVDLHHVVARD
RYMANTHVATAGGFVLAAVLAILVHGFGLHNRLLGYALLVATALMFGGALFVYRRRLNPP
ARLSRGPWMRLPKSLLVFSASFFIATLPVAGILPEGTGGWVLVALLGLGVLWGVSELFFG
MTWGGPMKHAFAGALHLAWHRRAERFGGGRSTGLKPLDLQDPSAPLGVEKPRDFTWNQLL
GFDACVQCGKCEAACPAFAAGQPLNPKKLIQDMVVGLAGGTDAKFAGSPYPGKPLGEHGG
NPHQPIVDGLVDADTLWSCTTCRACVEECPMMIEHVDAIVDMRRHLTLEKGATPNKGAEV
LDNLIATDNPGGFAPGGRMNWAADLDLEVLGEVHGTDVLLWVGDGAFDMRNQRTLRAFVK
VLRAANVGFAVLGLEERDSGDVARRLGDEATFQQLARRNIRTLAQYRFTRIVTCDPHSFH
VLKNEYGALGGHYQVQHHSSFIAELIAAGRLDLAPHKGASVTYHDPCYLGRYNGEYEAPR
QVLRALGIEVREMARSGFRSRCCGGGGGAPITDIPGKQRIPDMRMQDIRETAAEVVAVGC
PQCTAMLEGVVEPRPQIKDLAELVADALREATVASTPVASQPEPAQVDP
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaccctgctacccctgctgctgtttgccgccctcggcctggccgtgctcggc
gcgctgcggcgcgtgcggatgtggcgccaaggccggccatcgcgggtcgagctgctcaag
ggcctgctggccatgccacgccggtacatggtcgacctgcaccacgtggttgcccgcgac
aggtacatggccaacacccacgtcgccaccgccggcggcttcgtgctggccgccgtactg
gcgatcctggtgcacggtttcggcctgcacaaccgcctcctcggctacgccctgctggtg
gccaccgccttgatgttcggcggtgcgctgttcgtctacaggcgccggctgaacccgccc
gcgcgcctgtccagaggcccctggatgcgcctgccgaaaagcctgctggtgttttccgcc
agcttcttcatcgccactctgccggtagccggcatcctgcccgaaggtaccggtggctgg
gtgctggtggccttgctcgggctgggcgtgctgtggggtgtgagcgagctgttcttcggc
atgacctggggcgggccgatgaagcacgccttcgccggtgccctgcacctggcctggcac
cggcgcgccgaacgcttcggcggcggacgctccaccgggctcaagccgctggatctgcaa
gacccgagcgcaccgctgggtgtggaaaaacccagggacttcacctggaaccagttgctt
ggcttcgacgcctgcgtgcaatgcggcaaatgcgaggccgcgtgcccggcgttcgccgcc
ggccagccactgaacccgaaaaaactcatccaggacatggtggtgggcctggcgggtggc
accgatgcgaagtttgccggcagcccgtaccccggcaaaccgctcggcgaacacggcggc
aacccgcaccagccgatcgtcgacggcctggtggatgccgacacgctgtggtcgtgcacc
acctgtcgggcgtgcgtggaagagtgcccgatgatgatcgagcacgtggatgcgatcgtc
gacatgcgtcgccacctgaccctggaaaaaggcgccacgccgaacaagggcgccgaggtg
ctggacaacctgatcgccaccgacaaccccggcggcttcgccccgggcgggcgcatgaac
tgggccgccgacctcgacctcgaggtgctgggcgaggtgcacggcaccgacgtgctgttg
tgggtgggtgacggcgccttcgacatgcgcaaccagcgcaccctgcgcgccttcgtcaag
gtgctcagggcggccaatgtaggctttgccgtgcttggcctggaggaacgcgacagcggc
gacgtggcccgccggctgggcgacgaggccaccttccagcaactggcccggcgcaatatc
cggaccctggcgcagtaccgcttcacgcgcatcgtcacctgcgacccgcacagcttccat
gtactgaagaacgaatacggcgcgctgggcgggcactaccaggtgcagcatcacagcagc
ttcatcgccgagttgatcgccgccggccgcctcgacctggcgccgcacaagggcgccagc
gtgacctatcacgacccgtgctacctgggccgctacaacggcgagtacgaggcgccgcgc
caggtgctgcgtgcgctgggcatcgaggtgcgcgagatggcgcgctccggctttcgctcg
cgttgctgcggcggcggtggcggtgcgccgatcaccgacattccgggcaagcagcgcatt
cccgacatgcgcatgcaggacatccgcgagaccgccgccgaggtggtggccgtgggctgc
ccgcagtgcaccgcgatgctcgaaggcgtggtcgaaccacgcccgcagatcaaggacctg
gccgagctggtggccgacgcgctgcgtgaagcgacggttgccagcacgccggtagcaagc
caaccagaacctgcgcaggtggacccatga
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