Podarcis raffonei (Aeolian wall lizard): 128403998
Help
Entry
128403998 CDS
T09310
Symbol
HNF1A
Name
(RefSeq) hepatocyte nuclear factor 1-alpha isoform X1
KO
K08036
transcription factor 1, hepatocyte nuclear factor 1-alpha
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
praf03000
]
128403998 (HNF1A)
Transcription factors [BR:
praf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
128403998 (HNF1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
HNF-1A_C
Homeodomain
Telethonin
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
128403998
NCBI-ProteinID:
XP_053225208
LinkDB
All DBs
Position
16:26335084..26382365
Genome browser
AA seq
652 aa
AA seq
DB search
MVSKLTHLQVELLGALLESGLSKETLIKALMESDPYPQHGDSQQRTASTIQVEKREPCTE
LTALANGMGESRMSEEETSDDGEDFTPPIMKELENLSPEEAAHQKAVVERLLQEDPWRVA
KMVKSYLQQHNIPQREVVDTTGLNQSHLSQHLNKGTPMKTQKRAALYTWYVRKQREVAQQ
FTHAGQGIMVEDAMGEDLPTKKGRRNRFKWGPASQQILFQAYERQKNPSKEEREALVEEC
NRAECIQRGVSPSQAQGLGSNLVTEVRVYNWFANRRKEEAFRHKLAMDSYSGPQPGSVPT
LGSSSLQSATPLSPSKVHEQSPLQQQQQQQQQQQLSFSDSGMRYNQQPVSETDSSDGNQH
GGSNSIVTTQTILHHASSPGLCSVSSAGDAKLISAPGGSLPPVSTLTALHSLEQNHTLSQ
QTQNLIMASLPGVMAIGPGDTSSLTPAFTNTGASTLVIGLASTQPQSVPVINNMGSSLTT
LQPVQFSQQLHPSYQQPIMQQVQGHLNQSPFMATMAQIQAPHALYGHKPEMAQYAHTGLL
PQTMVITDTANLSALASLTPTKQVFTSDSEAHTESGMHTPPVQASTIHLQNQDATIQHLQ
PSHRLTSSPAVSSSSLVLYQSSDSSNSHSHLLPSTHGVIETFISTQMASSTQ
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggtttccaaactcactcatcttcaggtggagctgctgggggctctcctggaatctggg
ctgagcaaggagacactgatcaaagctctgatggaatcggacccctacccacagcatggc
gacagccagcagcgtactgccagcaccatccaagttgagaaaagagaaccctgcacagaa
ctcacggctcttgccaatgggatgggggagtccaggatgtccgaagaggagacctctgac
gatggagaagacttcactccgccaataatgaaggagctggaaaacctaagcccagaagag
gctgcacaccagaaagccgtggtggaaagactcttacaagaggatccctggagggtagcc
aagatggtgaaatcctacctacagcagcacaatattccccagcgggaggtggtagacacc
acaggcttgaatcaatcccacctctcccagcatctcaacaagggcacacccatgaaaact
cagaagagggctgccctctacacctggtacgtccgcaagcagcgagaggtggctcagcaa
ttcacccatgctggccagggcataatggtggaagatgcaatgggagaggacctgccgacg
aagaaaggcagacgcaatcgcttcaagtggggcccagcttcacagcaaatcctcttccaa
gcctatgagaggcagaagaatcccagcaaggaggaacgggaagccttagtggaggagtgc
aacagggcagagtgcatccagcgcggtgtatccccttcccaggcccagggtctgggctcg
aacctggtgactgaggtgagagtttacaactggtttgccaaccgccggaaggaggaggct
ttccggcacaagctcgccatggacagctacagtgggccgcagcccggatctgtgcccacc
ttgggctcttcctcgctccagtcagcaacgcccctctcaccaagcaaggtccatgaacaa
tcccctttgcagcagcaacagcagcagcagcagcagcaacaactctccttttccgactct
ggcatgaggtacaaccagcagcccgtcagtgagacagattcctcagacggcaaccagcat
gggggaagcaattccattgtgaccacccagaccatcttgcaccatgcttcttcccctggc
ctgtgctcagttagttctgcaggagatgcaaagctgatctccgctcctgggggctctctc
cccccagttagcaccctgacagccctgcacagcctagagcagaaccacaccctgagccag
caaacccagaacctcatcatggcatcactcccaggtgtcatggcaattgggccgggagac
acgtcttcgctcacaccagccttcaccaacacaggggcctccactctggtcatcggcttg
gcctccactcagccccagagtgtcccagtgatcaacaacatgggcagcagcctcaccacc
ctgcagccagtccagttctcccagcagctgcacccatcgtaccagcagcccatcatgcaa
caggtccagggccatctcaaccagagccctttcatggccaccatggcccagatccaggca
cctcacgctctctacggccacaaaccagagatggctcagtacgcccacactgggctgctg
ccgcagaccatggtgatcacagacacagccaacctcagcgccttggccagcctgacgcca
accaagcaggtgttcacatcagactctgaggcacacacagagtctgggatgcacacgccc
cccgtgcaggcttccaccatacacttacagaaccaagatgccaccatccagcacctccag
cccagccatcgactcacctctagccctgctgtctcctccagtagcctggtgctctaccag
agctccgactcctccaacagtcacagccacttgctgccgtccactcatggtgtgatagag
acttttatctccacccagatggcctcttccacccagtag
DBGET
integrated database retrieval system
