Podarcis raffonei (Aeolian wall lizard): 128406986
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Entry
128406986 CDS
T09310
Symbol
TAF1
Name
(RefSeq) transcription initiation factor TFIID subunit 1
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128406986 (TAF1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
praf01001
]
128406986 (TAF1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
praf03021
]
128406986 (TAF1)
03036 Chromosome and associated proteins [BR:
praf03036
]
128406986 (TAF1)
Enzymes [BR:
praf01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
128406986 (TAF1)
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
128406986 (TAF1)
Protein kinases [BR:
praf01001
]
Serine/threonine kinases: Other
TAF1 family
128406986 (TAF1)
Transcription machinery [BR:
praf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
128406986 (TAF1)
Chromosome and associated proteins [BR:
praf03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
128406986 (TAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3591
Bromodomain
TBP-binding
zf-CCHC_6
Motif
Other DBs
NCBI-GeneID:
128406986
NCBI-ProteinID:
XP_053230866
LinkDB
All DBs
Position
Z:complement(47135842..47184854)
Genome browser
AA seq
1811 aa
AA seq
DB search
MSDTDSEEAAAAAAAAAKPFSLAAFHFGNINDHGQLEGEENFDEETKKRLADLGAMDLGS
YITEATAGEYDASVVDEAHMDEEGWVKSNDNAVDYSDITELVEDDVHSGQAVCSPQLVVR
AGKRWQMVSSVAFGITDLFLIKLVPAALMSVLVLSCSSSLESYTFNNCNPGFCSCCGVSV
SGSEEISSRLMTPSPPPPPALEEQDTTYFGNEDSENAMQLPTISSSESEQQSKEDKSTFP
LAGIMQQDATEQLPSATDLFPEFRPGKALRFLRLFDPGKNAPSVWSTAHGKLKKKKKKQK
HQKSTQKVQFQKGEAATEEGTEGKSSWEYKFAPTPPPEQCLSDDEITMMAPVKPKASQST
KNTKVAAPTSKVAEWRHGPAKFWYDMLGVPEDGSGFDYGFKMKEHKEEETPKAEKDNLLS
DEDFLMVTQKHWEDDVIWNVDDIKEDPKAKQARQEAWLPSSMKTGAAATSTQQANQKEGK
PWYSIFPIENRELIYGRWEDNIIWDHEAMENVLTPSVMTLDSDDENLVLEIPEEEDEETL
NTPSENKKKPSQRNSRILLSKTGVIQEEPQQNMSDPEVKDPWNLSNDEFYYPNKRRLHGT
FGGNIIQHSIPAMQLQQPFFPTHLDPTELRQLHRPPLKKYSVGALSQPGPHPVQSLQNHI
EKKAKMRRSALQASGGGEMFFMRTPQDLSGKDGDLILAEYSEENPPLMMQVGMATKIKNY
YKRKPGKDSGPPKQPYGETTYCQTSPFLGSLYPGQQLQAFENNLFRAPIYRHKMPETDFL
VIRDQNGYHIRDLQDIFVVGQQCPLFEVPQPNSRRAKTHIRDFLQAFIYRLFSKRDEPQR
IRMEDIRNAFPLVSDTRVRKQLKRCAVYERTQMYSNWWKLKPGFRLPTEEEIRAMVSPEQ
CCGYYSMISAEQHLKDAGYGMKSFIAQEEKEEEGEQQRGEKEEENNLKIDDEIRCAPWNT
TRAFIAAMNGKCLLDVTGVADPTGCGEGFSYVKIPHKSSQRKDDKLLQKKTVTGSDADLR
RLSLKSGKQMLRQFGIPEEEINKLSRWDIVDVVRAISTKQARFDEESTNKFARGSRFSAA
EQKERYKENCQRIFDLQNKVLASTDILSTDTDSSSDEDSDVKEMGKELESMVQDNKTRRQ
LLRDKEEEERKELQKMLMEKKSINHKERSVKNQKDRKELSSTPGNTGEPNDSSGTASATS
PDPATTSSSCLKIYRTFRDEDGKEYERCETVRNPLIIDAYTRIRKTKDDEFIRRFAISEK
QRKKLRCEKRQIQLKLMRLKRKKEKEQQKAPPKKKLRLEKIKCSACGTSGHMKNNKICPA
KLPSKPVAMTVEQEEELEKTIIPTDDSELIKVEGTKIVLGKQLVESANEVRKKSLVLKFT
KGQLLQKKEQGSGTTATSSYLNQPQRSSHQGSTAPIEILSYILEGIINEMQELPNTCYFH
KPVSRRGVRNYRKIIGRPMDLYTLRQNVRKQSYKSSKEFREHLELIVKNSATFNGPEHKL
TQIAQSMLDFGDQKLKEKEDKLARLEKAINRLLDDVHQAAFSYILDKIVSQKIKAVPHAR
LFFRPVNRRRVPKYYKVIVSPMDLRTISKNISRHKYQNREVFMDDVKLILANSMKYNGPD
SQNTKTAQEMVDICYKALEEYDEHLTQLEKDISAVNKAALEEADLESFDPTISQPCMPQK
VEDENRDLGEKEEGSVQQPQASMHYEDLTLSDTEESDSSGKEDDDTFTPIQQSESSRDSG
AGSSAVRPRQPFVLQENVQIDKDNKDSMMSYEAAGKISHAMEYSSASSHEDEEESDDLPS
TAGDSDLDSDE
NT seq
5436 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacacggacagcgaggaagcggcggcggcggcggcggcagcagccaagcccttc
tccctggccgcattccacttcggcaacattaacgaccacggccagctcgagggagaagag
aacttcgacgaggaaacaaaaaaacgtttggctgatctaggggcaatggatctggggagc
tacataaccgaagccacagccggtgaatatgatgcttctgtggtagatgaagcccatatg
gatgaggaaggctgggttaagagtaatgacaatgctgttgattattctgacattacagag
ctggttgaagatgatgtccacagtgggcaggcggtatgcagccctcagctagttgtgagg
gcaggtaagcggtggcagatggtttcctctgtcgcctttggcataactgatctttttcta
atcaagctggttcctgctgccctgatgtccgtgctggttctctcttgctcttcttctttg
gagtcctatacctttaataattgcaaccctggtttctgctcctgctgtggtgtttctgtt
tctggctctgaagaaatcagttccaggctgatgactccttcgccaccgccacctccagcg
ctggaggaacaggacacaacttattttgggaatgaagacagcgagaatgccatgcagctg
cccaccatttcctcttctgaatctgagcagcagtccaaggaagacaagtctacatttccg
cttgcagggataatgcagcaagatgccaccgagcagctgcccagcgccacagacctgttc
cctgaattccggccaggcaaggcgctgcgatttctgcgcctctttgaccctggcaaaaat
gccccatctgtctggagcacagcccatgggaagctcaagaagaagaagaagaagcagaag
caccagaaatcaactcagaaagtacagttccagaaaggagaagctgctactgaggaaggc
acagaaggcaaatcgtcctgggagtacaagtttgccccaactcctcctccggagcagtgc
ctttctgacgatgagatcaccatgatggcaccagtgaagcccaaggcctcccagtctacg
aaaaacacgaaggtggcagcccccacgtccaaggtggctgaatggcgccatgggcctgcc
aagttctggtatgacatgttgggcgtccccgaggacggcagtggctttgactatggtttc
aagatgaaggagcacaaagaggaggagactcctaaggctgagaaggacaatctgctgtca
gatgaggacttcctcatggtgacccagaagcactgggaggatgacgtgatctggaacgtg
gatgacatcaaggaggatcccaaggcaaagcaagcgaggcaggaggcctggttgccgtcc
agtatgaagacaggtgctgctgccaccagcacccagcaagcaaatcagaaagaaggcaag
ccgtggtactctattttccccattgagaacagagagctcatttatggccgttgggaggac
aacatcatctgggaccatgaagcaatggagaatgttttgactccatcggttatgacactt
gactcagatgatgaaaatctagtcctggaaattcctgaggaggaggacgaggagacattg
aacactccttctgaaaataagaaaaaaccttctcaaaggaatagccggattctcctgagc
aagacgggagttattcaggaggagcctcaacagaatatgtctgacccagaggtgaaggac
ccctggaacctctcgaatgatgaattttactatccaaacaagcgtaggcttcatggaacc
tttggaggcaacatcatccagcactcaattcctgcaatgcagcttcagcagcccttcttc
cccacccacctggaccccacagagctccgccagctgcaccggccccccttgaagaaatac
tccgtcggggccttgtcccagcctggcccccatccagtgcagtcactacaaaaccacatc
gagaagaaagccaagatgagaaggagtgcgctgcaagcctctggtggtggggagatgttc
ttcatgcgcactccgcaagacctctcaggcaaggatggagaccttatcctagcggagtac
agtgaggagaacccccccttaatgatgcaggttggcatggcaaccaagatcaagaactac
tacaagcggaagccgggtaaagattcaggtccccctaagcagccatatggggagaccacc
tactgccaaacctccccgttcttgggttctctttacccaggccagcaactccaggcattt
gaaaacaatctcttccgggctccgatttatcgtcacaagatgccggaaacagacttctta
gttatccgggatcagaatggttaccacatccgggatttgcaggatatctttgtggttgga
cagcaatgtcctctctttgaagttcctcaacccaactccagacgtgccaagactcacatt
cgagactttctccaggccttcatataccgcctgttcagtaagagagacgaaccccagagg
atccgcatggaggatatcaggaatgcatttcctttggtctcagataccagagtccggaag
cagctgaagcgctgtgcagtctatgagcgcacacagatgtactcaaactggtggaaacta
aagccaggtttcagactgcccaccgaagaggagataagagcaatggtgtctccagagcag
tgctgcggctattacagcatgatctctgccgaacagcatttgaaggatgcaggttatggg
atgaaatccttcattgcccaagaagaaaaagaagaggagggagagcagcaaagaggagaa
aaggaagaagaaaacaatctgaagatagatgatgagatacgttgtgccccctggaacact
acgcgggcctttattgcagcaatgaacgggaaatgtctcttggacgtgactggagtggca
gaccctacaggatgtggagaaggattctcctatgtgaagatcccacacaagtcatctcag
cggaaagatgacaagctgctccagaagaagacagtgactgggtcggatgcagatctccgg
cgcctgtcactcaaaagtggcaagcagatgctgcgacagtttggaattcctgaagaggag
atcaacaagctttcccgctgggatattgttgatgtcgtgcgtgcgatatccacaaagcag
gctcgctttgatgaagaatcgacaaacaaatttgcccgtggttctcgcttctctgcagca
gagcagaaggagaggtacaaggagaactgccaacgcatctttgacttgcagaacaaagtt
ctggcatccactgacatcttatctacagacactgacagtagctctgatgaggacagtgat
gttaaggagatggggaaggagctcgagagcatggtacaggacaacaagacccgtcgtcag
ctgttgagggacaaggaggaggaggaacggaaggagctacagaagatgctgatggagaag
aaaagcatcaaccacaaggagaggagtgtgaagaaccagaaggacagaaaagagctgtcc
tccacccctggcaacacaggagagccaaacgatagcagtggcacggcttctgcgaccagc
cctgatcctgccaccacttcctccagctgcttgaaaatctaccgcactttccgcgatgag
gacgggaaggagtatgagagatgcgagacggtccgcaatccattgatcatcgacgcctac
accaggataaggaaaaccaaggatgatgagttcatccggaggtttgccatctcggaaaag
cagcgtaagaagctgcggtgtgaaaagcgccagatccagttgaagttgatgcggcttaaa
cgaaagaaagagaaggaacagcagaaggctcctcccaagaagaagctcaggttggagaag
attaagtgtagtgcttgcggtaccagtgggcacatgaagaacaacaaaatctgcccagcc
aaactgccctccaagccagtcgccatgacggtggagcaggaggaggagctggagaagacc
atcattcccaccgatgacagtgagctgatcaaagtggagggaaccaagattgtcttaggg
aagcaactcgttgagagcgcgaatgaagttcgcaagaagtctttagtcctgaagttcaca
aaaggacagcttctgcaaaagaaggaacagggctctggaaccacggctactagtagctac
ttaaaccagcctcagaggtccagccaccaggggagcacagcccccatagagatactgtct
tatatcctggaaggcattatcaacgaaatgcaagaacttccaaatacatgttacttccac
aagcctgttagcaggaggggtgtcagaaattatcgcaagatcatcggccgaccaatggac
ctgtacaccctgcgccagaatgtccgtaagcaatcttacaaatcgagcaaagaattccga
gagcacctggagctgattgtgaagaacagtgccacgtttaatgggccagagcacaagttg
actcagattgctcagtcaatgctggacttcggtgatcaaaaactgaaagagaaggaagat
aaactggctcgtttggaaaaggcaattaatcgccttctggatgatgttcatcaagcggcc
ttctcctatattctggacaagattgtatcccagaagataaaggctgttcctcatgccagg
ctctttttccgtcctgtaaacaggagacgcgtgccaaaatattacaaagtcattgtcagc
ccgatggacttgaggactatcagcaagaatatctccagacataaataccagaatcgagaa
gtctttatggatgacgtgaaactgatccttgccaacagcatgaaatacaatggtcctgac
agccagaacacaaaaacagctcaggagatggtggacatctgttacaaggcactagaagag
tatgatgagcacttgacccagcttgagaaggatatctctgctgttaacaaagcagcctta
gaggaggcagacctggagagctttgacccaaccatctctcaaccctgcatgccccagaaa
gtggaagatgaaaacagagacctgggtgaaaaggaagaaggctcagtgcagcagcctcag
gccagcatgcattatgaagacttgaccctgtcagataccgaggagagtgacagcagtggc
aaggaagacgatgacactttcacaccaatccagcaaagtgaaagtagcagagattcaggt
gcaggatcctctgcagtgagaccgagacagcctttcgttcttcaagagaatgtgcaaata
gacaaagacaacaaagacagcatgatgtcgtatgaggcagcagggaagatttcacatgcc
atggagtatagcagtgccagtagccacgaggacgaggaagaaagtgacgacctcccttcc
actgcaggagacagtgatctggattcagatgaataa
DBGET
integrated database retrieval system
