Podarcis raffonei (Aeolian wall lizard): 128411255
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Entry
128411255 CDS
T09310
Symbol
POLR1B
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2 isoform X1
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
128411255 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
praf03021
]
128411255 (POLR1B)
Enzymes [BR:
praf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
128411255 (POLR1B)
Transcription machinery [BR:
praf03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
128411255 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
128411255
NCBI-ProteinID:
XP_053239407
LinkDB
All DBs
Position
3:complement(106632706..106653363)
Genome browser
AA seq
1135 aa
AA seq
DB search
MGDSACKWRALPSGPSLRNLTAPGYGQPKERQTPALQDVARAHTESFNYAVGEGLLRAVQ
AIPPLEFLFKNDQITLAIVGATINSPMVPKGSICNELKVYPAECRGRKSTYRGKITADIS
WAVNGIPKGIIKQSLGNAPIMVKSKLCNLHGLSPKELIKHHEEEEEMGGYFIVNGIEKVI
RMVIMPRRNFPLAMIKPKWKSRGPGYTQYGVSIHCVRDEHTAVNMTLHYLENGTVMLNFI
HQKELFFLPLGFVLKALVSFSDFQIFQELIKGKEEDTFYKNCMSQMLRLVAEDGCMTQKQ
VLIFLGQRFRVKFSLPDWHSSEQVGEFLLNQCICIHLNNKAEKFYLLCFMTRKLFTLAKD
GCMEENPDSLMNQEVLTSGQLYLMFLKEKMETWLQSVKIALDKKAQKSAMTINAENMMKI
LGMGTDITRMLEYLLATGNLRSKTGLGMLQNSGLCVVADKLNFIRYLSHFRCVHRGADFL
KMRTTTVRKLLPESWGFLCPVHTPDGEPCGLMNHMTAPCEIVTQPSYTFSLPSLLCSLGV
TPVDAVPSQPYSECYPVSLDGSPVGWIEKDQAPGLVETLRHFKAMQEKKIPVWTEVVLIP
MTGKPSLYPGLFIFTTPCRMMRPVQNLALGKEELIGTMEQVFMNIAVSEDEIQPGLTTHQ
ELFPHSILSVVASFIPFSDHNQSPRNMYQCQMGKQTMGFPLLTFPYRSDDKLYRLQTPQS
PLVRPAMYDHYDMDSYPVGTNAVVAVISYTGYDMEDAMILNKASWERGFGHGSIYKTQRI
DLAEKVKKGEDNLVFGIGQDKLATLQNLDPDGLPHIGARLQYGDPFYSYVNLNTGESFVT
YHKNKEICIVDNIKVCSNDTGTGKFRCVCITLRVPRNPTIGDKFASRHGQKGILSRLWPA
EDMPFTESGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLCHNATPFTFSEENSAL
EYFGKMLKAAGYNFYGTERMYSGVSGVELEADIFIGVVYYQRLRHMVSDKFQVRTTGARD
KVTNQPIGGRNVQGGIRFGEMERDALLAHGASFLLHDRLFHCSDRSVTHVCIECGSLLSP
LLKPPPDWSTTRIRQHVCTTCGRSDTIETIAVPYVFRVFVAELASINVKVKLSVS
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacagcgcgtgcaagtggcgggctttgcccagcggccccagcctcaggaacctc
acggcgccgggctacgggcagcccaaggagcgccagacgccggctctgcaggacgtggcg
cgggcgcacaccgagtccttcaactacgccgtgggagaagggctgctgcgggccgtgcag
gccattccacctttggaatttcttttcaagaatgatcagatcactttggccattgtgggg
gccaccatcaactctcctatggtaccaaaaggaagtatatgtaatgagctaaaagtttac
ccagcagaatgcagggggcgcaaaagcacctaccgcggaaaaataactgctgatatcagc
tgggcagtgaatggcatccctaaagggattataaaacagtccctcggaaatgctccgatt
atggtgaagtccaaactttgcaatctccacggtctctcacccaaagagctcatcaaacac
catgaggaggaagaggaaatgggaggctatttcattgttaacggtatagaaaaggtgatc
agaatggtgattatgccaaggcgcaactttccccttgcaatgattaaaccaaaatggaaa
tccagaggtccaggctacacacaatatggtgtctcaatacactgcgttagagatgaacac
acagcagttaacatgacccttcactaccttgaaaatggcacagtgatgctgaacttcatt
catcaaaaagagctgttctttcttccactcggatttgtactgaaggcattagttagtttc
tcagatttccagatttttcaggagctgattaaaggaaaagaagaggatactttctataag
aactgtatgtctcagatgctgcggctggtagcagaggatggctgcatgacgcagaaacaa
gtcctcatcttcctggggcagcgcttcagagtcaaattcagccttcctgactggcacagc
agtgaacaagttggagagttccttcttaaccaatgcatctgcatacacctgaataacaaa
gctgagaagttctacctgctttgcttcatgactcgaaaactgtttactttagccaaagat
ggctgcatggaggaaaatcctgacagtttaatgaatcaagaggtgctcacctcaggacaa
ctttacctcatgtttttaaaggagaagatggaaacttggttgcagtctgtgaaaatagcc
ttggacaagaaagctcagaagtcagctatgacaattaatgcagaaaacatgatgaagatt
cttggcatggggacagatattacaaggatgcttgagtatctccttgctactggcaacctg
cgctctaagacaggtctgggcatgctgcaaaactccggcctctgtgtggtagcagacaag
ctgaacttcatccgctacctctcccatttccgctgtgtgcacagaggggctgattttctc
aagatgagaaccaccacggtgcgcaagctgctgccggagtcctggggcttcctttgtccc
gtccacacgcccgatggagaaccgtgcggtctgatgaatcacatgacagctccgtgtgaa
atagtaacgcagccatcgtatacattctccctgccatccttgctttgctctttgggtgtc
actccagttgatgctgtgccaagccagccctactctgaatgttacccagtttcattagac
ggctccccagtaggctggatagagaaggatcaggctcctggtcttgtggagacactcagg
cacttcaaggcaatgcaagaaaagaagattcccgtttggacagaggtggtccttatcccg
atgacaggaaagcccagcctttacccaggactcttcattttcaccaccccttgtaggatg
atgcgccccgtgcaaaatttggccctgggaaaagaagagttaattggcacaatggagcag
gtcttcatgaacattgctgtgtctgaggatgaaattcaaccaggactgaccacacaccaa
gagctctttccccatagcatattaagtgtggtggcaagtttcattcccttctcagatcac
aaccagagtccaagaaatatgtaccagtgtcagatgggcaagcagacgatgggtttcccg
cttctgaccttcccataccgctcagacgataagctctaccgacttcagactcctcaaagc
ccactggtgcggccggctatgtatgaccattacgacatggactcctacccagtcggtaca
aatgcagttgttgctgtgatctcctatactggctacgacatggaagatgcaatgatcttg
aacaaggcttcatgggagagaggctttggacatggaagtatctacaaaacgcaacgtatt
gaccttgcggaaaaagtcaagaagggagaggataatctggtatttgggattggtcaggat
aagctggcaactttgcagaatctggaccctgacggcttgccccacatcggagccagactt
caatacggggaccctttctatagttacgtgaatctcaacacgggggaaagctttgtgacc
taccacaagaacaaggaaatctgtattgtggataacatcaaagtatgcagcaacgacaca
gggactgggaaattcaggtgtgtgtgcatcaccctgagggtcccccggaacccaacgatc
ggggacaaatttgccagccggcacggacagaaaggcatcttgagcagactgtggccggct
gaggacatgcccttcaccgaaagtggaatggtgccggatatcctcttcaaccctcacggc
ttcccatcccgaatgaccattggcatgttaattgagagcatggcgggcaaatccgccgct
ttgcacgggctctgtcacaacgccacacccttcacattttctgaggagaactctgctctg
gaatactttggcaagatgctgaaggccgctggctacaacttctacgggacggagcgaatg
tacagcggcgtctcgggagtggagctcgaagcagacatcttcatcggcgtggtgtactac
cagcgcctcaggcacatggtctctgacaagttccaggtgaggactactggggccagagat
aaagtcaccaaccagcccatcggagggcggaacgttcagggcggcatccgttttggagag
atggaacgggacgctctgctggctcacggggcctccttcttgctgcacgaccgccttttc
cactgctccgatcgctcggtgacccacgtgtgcattgagtgcgggagcctgctttctccc
ctcttgaagcctccgcccgactggtccaccacacgcatcaggcaacacgtctgcaccact
tgcggccggagcgacaccattgaaacgattgccgtcccgtatgtcttccgcgtcttcgta
gcggaattggcttccattaatgtaaaagtgaaactcagtgtgagttag
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integrated database retrieval system
