Podarcis raffonei (Aeolian wall lizard): 128421312
Help
Entry
128421312 CDS
T09310
Symbol
NFKB1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04010
MAPK signaling pathway
praf04210
Apoptosis
praf04218
Cellular senescence
praf04620
Toll-like receptor signaling pathway
praf04621
NOD-like receptor signaling pathway
praf04622
RIG-I-like receptor signaling pathway
praf04623
Cytosolic DNA-sensing pathway
praf04625
C-type lectin receptor signaling pathway
praf04920
Adipocytokine signaling pathway
praf05132
Salmonella infection
praf05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128421312 (NFKB1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
128421312 (NFKB1)
04218 Cellular senescence
128421312 (NFKB1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
128421312 (NFKB1)
04621 NOD-like receptor signaling pathway
128421312 (NFKB1)
04622 RIG-I-like receptor signaling pathway
128421312 (NFKB1)
04623 Cytosolic DNA-sensing pathway
128421312 (NFKB1)
04625 C-type lectin receptor signaling pathway
128421312 (NFKB1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
128421312 (NFKB1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128421312 (NFKB1)
09171 Infectious disease: bacterial
05132 Salmonella infection
128421312 (NFKB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
praf03000
]
128421312 (NFKB1)
Transcription factors [BR:
praf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
128421312 (NFKB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank
Ank_2
Ank_4
Ank_3
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
128421312
NCBI-ProteinID:
XP_053259916
LinkDB
All DBs
Position
9:complement(59108265..59182453)
Genome browser
AA seq
982 aa
AA seq
DB search
MADDNAYLLGVTDPQVYGMDHIMGMNQLLNSTSMITSDLHLHTGDGPYLQIVEQPKQRGF
RFRYVCEGPSHGGLPGASSEKNKKSYPQVKICNYAGPAKVIVQLVTNGKHAHLHAHSLVG
KHCENGVCTVNAGPKDMVVGFPNLGILHVTKKRVLDTLEARMIDSCKKGYNPGLLVHPDL
SYIQVEGGGERQLTEREREIIHQSALQQTKEMDLSVVRLMFTAFLPDSTGSFTRRLQPVL
SDPIYDSKAPNASNLKIVRMDRTAGCVTGGEEIYLLCDKVQKDDIQIRFYEEDENGGVWE
GFGDFSPTDVHRQFAIVFKTPKYRDVNITKPASVFVQLRRKSDLETSEPKPFLYYPEIKD
KEEVQRKRQKLMPNFSDGYGGSGAGAGGGGMYGGGGGGGGVGGGAGSGYGYPSYGFSGYG
HSMHFHSSTNKTGAGMKHGLSNGMPKNDGEICCNKKRSVKFKEKVEDDEKSKTRTSTTPK
EVEEDALPCYDADICLQDGLFLEKAMELAKRHANALFDYAVTGDVKMLLAVQRHLTAAQD
ENGDNVLHLAIIHLHKELVRNLLEVVADLNADDVLNVRNDLYQTPLHLAVITKQAGVVKD
LLRAGADVSLLDRYGNSVLHLAAKQGDEKVLSMLLSHKETSLMRDLPNGEGLAVIHLAVM
ANSVSCLRLLIAAGADVNAQEQKSGRTALHLAVEQGNISLAGCLLLEGDAFVDSTTYDGT
TPLHIAAGRGSTKMTALLKAAGADPHIENFEPLFEQDDVKDKDGEDEGVIPGTTPLDMAT
SWEVYDILNGKPSKSKIASEDLLTQGNMKELKEDVKLQLYKLLEVPDLNKNWSMLAQKLG
LGILNNAFRLSPSPSKTLLDNYEVSGGTVRELVDALIEMDCTEAAEIIQNSLSISSSQSS
KEQAKDARPPLCESPSPPMIAQPGDLKFQDAESICDSGVEISLRKLSFTYSESFTSKSPV
TLKKLTTGYGQDNLPQGKIEAT
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgacaatgcgtatctcttgggagttacggaccctcaggtgtatggaatggac
cacatcatggggatgaatcagctgctcaatagtacaagcatgattacatctgatcttcac
ctgcacacaggtgatgggccataccttcaaattgttgaacaacctaagcagaggggtttt
cgcttccggtacgtttgtgaaggaccatcgcatggtggacttcctggagcttctagcgag
aagaacaaaaaatcatatccacaagttaaaatttgcaattatgctgggcctgcaaaagtc
attgtgcagttagtcacaaatggaaagcatgctcacctgcatgctcacagcttggtgggg
aagcactgtgaaaatggagtgtgcactgttaacgcaggaccaaaagacatggttgtagga
tttccaaacctggggatactgcacgttacaaagaagagagtcttagacacactggaagca
cgtatgattgattcctgtaaaaaagggtataacccaggactcctagtacatcctgatctc
agctatatacaagtggaaggtggaggggagagacagctaacagagagagaaagagaaatc
attcatcagtcagctcttcaacagacaaaagaaatggacctcagcgtagtacggctcatg
tttacagcgtttcttcctgacagcactggcagctttacaagaagactccaacctgtcttg
tccgatcctatatatgatagcaaagcccccaatgcatctaacttaaaaattgtacgaatg
gatcggacagcaggctgtgtgacaggaggagaagagatttaccttctttgtgacaaggtt
cagaaagatgatattcagatccgtttttatgaagaggatgaaaatggcggtgtctgggaa
gggtttggagatttttcgcctactgatgtgcacagacagtttgccatagtattcaaaacc
ccgaagtaccgagatgtcaatatcacgaaacctgcatctgtttttgtccagttacggcga
aaatcggatctagagacgagtgaaccaaagccctttttatactatcctgaaatcaaagat
aaagaagaagtccaaagaaaacgacagaagctcatgcctaacttctcagatggttatggc
ggaagtggtgcaggtgcaggaggtggtggaatgtatggaggaggaggaggaggaggtggt
gttggaggcggtgccggatcagggtatggatacccatcctatgggttttctggttatggg
cattcaatgcacttccattccagcacaaacaagactggtgcaggaatgaagcatggactg
tcaaatggcatgccaaaaaatgatggtgaaatctgctgcaacaaaaaacgcagtgtgaaa
ttcaaggagaaagtagaggatgatgagaaaagcaaaaccagaactagcacaactcccaaa
gaagttgaagaagatgccttaccatgttatgatgcagacatttgtttacaagatggtttg
tttttggagaaggccatggagttagctaagcgtcatgcaaatgccctttttgactatgca
gtaactggagatgtgaagatgctactggctgttcagcgccaccttacagctgcccaggat
gaaaatggtgacaacgtacttcacttagcaattattcatcttcataaggagctggtgagg
aacctcttagaagtggtagcagatttgaatgctgatgatgtcctcaatgtgagaaacgac
ctttatcagactcccttgcacttggctgttatcacaaagcaggcaggagtggtgaaggac
ttgcttagagctggggcagatgtgagcctcttggaccgctatggcaattcagtcttgcat
ctagcagcgaagcaaggagacgagaaggtgttgagtatgctgcttagccacaaagagacc
tctctgatgagagatcttcctaacggggaagggctggctgttattcacctagccgtgatg
gcaaatagcgtgtcttgtctccggctgctcattgctgctggtgctgatgtcaacgcccaa
gaacagaaatctggcagaactgccttgcacctggctgtcgaacaaggaaatatatccttg
gcaggttgccttctgcttgagggtgatgcatttgtcgacagcactacatatgatggaaca
actccacttcacatagcagctggaagggggtctacaaaaatgacagctcttctcaaagca
gcaggcgcagatccccacattgagaactttgaaccattgtttgaacaagatgatgtgaaa
gacaaagatggtgaagatgaaggggtcatacctggaacaacacctttggacatggcaact
agctgggaggtgtacgatatcttgaatggtaaaccctccaaatcaaagatagcttccgaa
gatctattgacacaaggaaacatgaaagagctgaaggaggatgtcaagttacagctttac
aagttacttgaagtgcctgatctgaacaaaaactggtccatgctggcgcagaagcttggc
ctagggatacttaacaatgccttccggttgagcccctctccatcaaaaaccctgcttgat
aattatgaggtttctggtggcactgtaagggagctggttgatgccttgatagaaatggat
tgtacagaggctgcagaaataattcagaactcattatccatctcatcgagccagtccagc
aaagagcaggcaaaggatgcaagaccgccattatgcgaatcgccttcccctcccatgata
gcacaaccaggtgatctcaaattccaggatgctgaaagtatttgtgacagcggtgtagag
atttccctccgcaaactcagcttcacatattcggagtctttcaccagcaagtcaccagta
acacttaagaaactaaccacaggctatggccaggacaacttgccacaaggcaaaattgaa
gccacttag
DBGET
integrated database retrieval system
