Podarcis raffonei (Aeolian wall lizard): 128423130
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Entry
128423130 CDS
T09310
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04020
Calcium signaling pathway
praf04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
128423130
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128423130
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
praf04040
]
128423130
Ion channels [BR:
praf04040
]
Ligand-gated channels
Glutamate (ionotropic)
128423130
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
DUF6724
Motif
Other DBs
NCBI-GeneID:
128423130
NCBI-ProteinID:
XP_053263887
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All DBs
Position
11:complement(61835348..61863093)
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AA seq
1096 aa
AA seq
DB search
MRLLLLAVLLCFSVARGGCEPKVVNIGAVLSTKRHEQVFREAINQANKRHGTWKIQLNAT
SVTHKPNAIQMALSVCEDLISSQVYAILVSHPPAPNDHLTPTPVSYTAGFYRIPVIGLTT
RMSIYSDKSIHLSFLRTVPPYSHQSNVWFEMMRFYKWNHIILIVSDDHEGRATQKKLETL
LEEKESKSKKRSFDSLEPLSFDNKRGPKAEKVLQFEPGTKNVTSLLLEAKELEARVIILS
ASEDDATTVYTAAAKENMTGPGYVWLVGEREISGNALRNAPEGLIGLQLMNGKNESAHIR
DAVAIVAQAVHDLFEKENITDPPRGCVGNTNIWKTGPLFKRVLMQTKYAEGVTGRVEFNE
DGDRKYANYSIMNLQNNKLVQVGIYNGSHFLPNDRKIIWPGGETETPQGYEMSTKLKIVT
IHQEPFVYVKETLADGKCKALTNSTGGLVQQVLCTGPNETMPGRPSVMLCCYGFCVDLLI
KLAKTMNFTYEVHLVGDGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTINNERA
QYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFS
PFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIV
ASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYR
HMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRK
DSPWKQNVSLAILNLHENGFMEELDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGI
VAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRPSARAEPGPRMKTTFRSIT
STLANSFKSRRSCRDTVRRRQPVVPSFFLSLFLLPSHQPPHLTAAMAPFRPLSVRLHRLS
QRSRAPSSPRTWFVFLSVPTPRKTQNFLSPLLISSPSRPGPSPESGPPCRLPLVPVSSRL
QPSPASALSVGFRQGSWPCLAPCLSSPSLPVLSVRGFLGNDEAGEGPSIVGRTAKLHCLA
RANISPVETGASGHPL
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctcctgctgctggccgtgctgctgtgcttctcggtggcgcgggggggctgcgag
cccaaggtggtgaacatcggggcagtgctgagcaccaagaggcacgagcaggtcttccgc
gaggccatcaaccaggccaacaagcgccatggcacctggaagatccagctcaacgccacc
tccgtcacccacaagcccaatgccatccagatggccctctctgtctgcgaggacctcatc
tccagccaggtctacgccatcttggtgagtcacccgccagctcccaacgaccacctcacg
ccgacgccagtgtcatacactgctggcttctaccggatcccggtcattggcttgactacg
cgcatgtccatctactcggacaagagtatccatctttcgttcctccgcacggtccctcct
tactctcaccagtccaatgtctggtttgagatgatgcgcttctacaaatggaaccacatc
atcctcatcgtcagcgatgaccacgagggccgggcgactcagaagaagctggagaccctc
ctggaggagaaagagtccaagagtaaaaaaaggagctttgacagcctcgaaccgctatcc
tttgacaacaagcgaggacccaaggccgagaaggtccttcagtttgagccgggcaccaag
aatgtgacgtctctcctcctggaagccaaggaactggaggccagggtgatcatcttgtct
gccagtgaggatgacgccaccaccgtctacacggccgcagccaaagaaaacatgacaggt
cccggctacgtctggctggtgggggaacgggagatctccggcaatgccctacgcaatgcg
ccagaaggtctcatcggtctacaactcatgaacggcaagaacgagtcagctcacatccgg
gacgcggtggccatagtggcccaggcagtccacgacttgtttgagaaggagaacatcacc
gacccacccagggggtgcgtggggaacaccaacatctggaagaccgggccacttttcaaa
agggtactgatgcagacgaagtacgccgagggtgtgacgggccgggtggagttcaacgag
gatggggaccgcaagtacgccaactacagcatcatgaacctgcagaacaacaagttggtg
caggtcggcatctacaacggcagccacttcctgcccaacgaccgcaagatcatctggccg
ggaggagaaaccgagacgccccagggctacgagatgtctaccaagctcaagattgtcacc
attcaccaggagccgttcgtctacgtcaaggagaccctggccgatggcaagtgcaaagcc
ctcaccaacagcaccggtggcttggtgcagcaggtcctctgtacggggcccaacgagacc
atgccgggccgccccagcgtgatgctctgctgctatggcttctgcgtcgacctcctgatc
aagctggccaagaccatgaacttcacttacgaggtccacctggtgggcgacgggaagttt
ggcacacaggagagggtgaacaacagcaacaagaaggagtggaacggcatgatgggggag
ctcttgagcggtcaggcggacatgatcgtggctcctttgaccatcaacaatgagcgggcc
cagtacatcgagttctccaagccctttaagtaccagggactcaccatcctggtgaagaag
gaaatcccccgcagcaccttggactcgttcatgcagccgttccagagcaccctgtggctc
ctggtgggcctatcggtccacgtggtggctgtgatgctttatctcctggaccgtttcagc
cccttcggccgcttcaaagtcaacagtgaggaagaggaagaggatgccctgaccctgtca
tctgccatgtggttctcctggggagtcttgctcaactctggcatcggagaaggcgctccc
cggagcttctccgcacggatcctggggatggtgtgggctggattcgccatgatcatcgtg
gcctcttacactgccaacctggcggccttcctggtgttggacagacccgaggaacggatc
acgggcatcaatgatcccaggctgcgcaacccgtctgacaaattcatctacgccacggtc
aagcagagctcggtggacatctacttccgccggcaggtggagctcagcaccatgtaccgc
cacatggagaagcataactacgaaagcgccgccgaagccatccaggccgtccgggacaac
aaactccacgccttcatctgggactcggccgtcctggagttcgaagcctcccagaagtgc
gacctggtgaccactggagaactcttcttccggtctggatttggaatcggaatgaggaag
gacagtccctggaagcagaatgtctcgctggccattctcaacctccacgaaaatggcttc
atggaagagctggacaagacgtgggtgaggtaccaggagtgcgactcaaggagcaacgcc
ccagccaccctcacctttgagaacatggcaggcgtcttcatgctggtggccggtgggatc
gtggccggaatcttcctgatcttcatcgaaattgcctacaagaggcacaaggacgcccga
cggaagcagatgcagttggcctttgccgccgtcaacgtctggaggaagaacctacaggat
agaccaagtgctagagcagaaccaggccctagaatgaaaaccacttttaggtccatcaca
tccacgctggccaacagcttcaagagccgtaggtcctgcagagacacggtaagaagaaga
caaccggttgtgccctccttctttctctctctctttctcctgccatcccatcaaccgccc
catctcacagctgccatggccccgtttcgtcctctgtcagtccgtctccaccgtctgtcc
caaagatcgagggctccctcttctccccgtacgtggtttgttttcctttctgttccgacc
ccccgaaaaacccagaattttctttccccccttttgatttctagtccttcccgtcctggt
ccaagcccggaaagcggtccgccgtgccgtcttccccttgtccccgtctccagccgtctc
cagccgtctcccgcctctgcactttctgtgggattcaggcaaggatcatggccttgcctg
gcgccgtgtctctcgtcaccttctttacctgtgctttctgtccgtggcttccttggaaac
gacgaggcgggggaggggccctccattgtcgggcggacggccaagctccattgcttagcc
cgcgccaacatttctcccgtggaaacaggggcatctggccatcctctctga
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