Pieris rapae (cabbage white): 110993218
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Entry
110993218 CDS
T05162
Name
(RefSeq) Fanconi anemia group J protein homolog isoform X1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap03440
Homologous recombination
prap03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110993218
03460 Fanconi anemia pathway
110993218
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prap03400
]
110993218
Enzymes [BR:
prap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
110993218
DNA repair and recombination proteins [BR:
prap03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
110993218
FA (Fanconi anemia) pathway
Downstream FA components
110993218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
T2SSE
Motif
Other DBs
NCBI-GeneID:
110993218
NCBI-ProteinID:
XP_022115069
LinkDB
All DBs
Position
3:6329670..6376921
Genome browser
AA seq
929 aa
AA seq
DB search
MSNRDIVEISDDDDSFEVATENKIPVSEISSDEENYELPDINLTSRKNAIKKLFPTQLSN
TSIKSEIKHTIHNESYKPVKYPNISKEPGVVITINNVKVNFPVNPYSSQVALMNKEIKAI
TNHQNCLLESPTGSGKTLALLCAALAVQRKEKLQLSEKQAQNYYADHPELAKLHGVSEFI
ASPKKNILDNAEKFFTTSASNSKTIYSSQNYEASSSTKRQEPLNDSSEGDSGLVTVHKKP
RLGSSRNDGSPHLPSTPEKKIQVMEPSTPEDVRKLYALVDNLRVRTSMIVACRVPTIYYG
ARTHKQIEQVVKEFARTVYSGEAAMTVLSSREYSCIREFDRHQWPSKNDMCRGCVKTFES
NKKDSSNCLYYNNRKLLNHRSLPATFDLEDLVNAGKKKQACPYYAAREMATAANIIFCPY
NYLIEPGIRSSMQIEVSDNIVIIDEGHNIEDVCRDAATITITRANVTAAITELQKVSQYR
YEHQDSMGYIEHLLKVLSNWDQWFVNQMPLINNRPVNNDKAEYTWVVEHFLNTLENHTIG
LSHYSEFRDHAEMFCRRLREDPRTLMGVSQSTGTLVENINTLLGYLLRDGGRHIDDFVPT
LERTEIPDISRRHFKNNHLDKEELCLRLICMNPAVVFEALKPARSIIIASGTLAPLISMH
SELGTKFPLEANPRHIISSDRVWIGSLSTCPDGSPLQCIYSELQQVHIQDALGKIVVHVC
SITPSGVLCFLPSYWVMKKLITRWQDTGIWNMLESMKNVFQEGRNVRDHNDIMEDYYESA
ASSRGALLFAVYRGKVSEGMDFKDHQARAVIAIGIPYPNTFETAVKEKMKYNDKYQKERN
LLKGREWLQVQAFRPLNQAVGRCVRHRMDWGAVLLVDGRFQKPQYSDQLSKWVREYLHKN
HHTFESLLSSANSLESFMQHMKIQETEDT
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcgtgacatagtagagatatcagatgatgatgacagttttgaggttgctact
gaaaataaaatacctgtttctgaaatatcctcagatgaagaaaactatgaattgcctgac
ataaatttaacgagcagaaaaaatgcaataaagaaattgtttccaacacagctaagcaat
actagtattaagtcagaaataaaacatacaatacacaatgaatcctataaaccggttaag
tatcccaatatatcaaaggagcctggtgttgtcataacaattaataatgtaaaagtgaac
ttccctgtcaatccatatagcagccaagtggcattaatgaataaagaaataaaagcaatt
accaatcatcaaaactgcctccttgagagtccaacgggttcagggaaaactctggcattg
ctttgtgctgcattagcagtgcagagaaaggaaaaacttcagcttagcgagaaacaagca
cagaattattatgcggaccatcctgagcttgccaagctacatggtgtttcggaattcatc
gccagcccaaagaaaaatattctcgataatgctgaaaaattcttcaccacatccgcctct
aacagcaaaactatatatagctcacaaaattatgaagccagttcgagtactaaaagacag
gaacctttaaatgacagctcagaaggtgatagcggtttggtgacagttcacaagaaacct
cgtcttggtagcagcaggaatgatgggtcaccgcatttaccttcgacaccggaaaagaaa
atacaggtgatggagccgagcacaccagaagatgtgagaaagctgtacgctctagtcgac
aatctgcgcgtacgcacttcgatgatcgttgcttgcagagtgccgactatttactacggt
gcgaggacccataagcagatagagcaagtggtgaaggaattcgcgagaactgtgtacagt
ggtgaggcggcgatgaccgtgctgtcaagtagagaatacagctgcatacgggagtttgat
aggcaccaatggccatcgaagaatgacatgtgtcggggatgtgtaaagacatttgagagt
aataaaaaagactctagcaattgtctctactacaacaatagaaaacttctaaatcatagg
agtcttccagctacttttgatttagaagacctagttaatgctggaaagaagaaacaggca
tgtccctactatgctgccagggaaatggctacagcggcaaatataatcttctgtccgtac
aattatcttatagaacctggtattagaagcagtatgcaaatagaagtaagtgacaacata
gtgattatcgacgagggtcataacatagaagacgtgtgtcgtgatgctgctacgattacc
ataactcgtgctaatgtcacagctgccattactgaacttcaaaaagtatcacaatacaga
tacgaacatcaggactcaatgggatatattgaacatctgctgaaagttctcagtaattgg
gaccaatggttcgtgaatcagatgccattaatcaacaatcgcccagttaacaacgacaaa
gctgaatacacgtgggtggtggaacactttctgaatacgttggaaaatcatactattggc
ctttcacattattctgaatttcgtgatcacgcggaaatgttttgtcggcgactccgtgag
gatcctcgtacgttgatgggcgtgtcgcaatctacgggcacgctcgttgagaacatcaat
acattgctggggtatttattgcgtgacggtggtcgtcacatcgatgacttcgtgcccaca
cttgagcgaaccgagataccagacatatcacgtagacacttcaaaaataatcatttagac
aaagaagaactgtgccttcgtcttatttgtatgaaccctgcggtggtgttcgaagccctg
aagccagcgaggtccatcatcatagcctcgggaacgctggctccattaatcagtatgcat
tcggagctgggaactaagttcccattagaagctaatcccaggcatatcatatccagcgat
cgggtatggattggaagtttatctacctgcccggatggatcaccgttacagtgcatttac
agtgagttgcaacaagtgcacatacaagacgcgcttggaaaaatcgtggtacatgtgtgt
agcatcaccccctcgggagtgctttgcttcctgccgtcttattgggttatgaaaaaacta
atcacacgatggcaagataccggcatttggaatatgttggaatccatgaaaaatgtgttt
caagagggccggaatgttcgagatcataacgacattatggaggattattatgaatctgca
gcatcttcgcgtggcgcgttgctatttgcagtgtaccgaggtaaagtctccgaaggtatg
gacttcaaagatcatcaagcgagagctgtcattgccattggtataccctatccaaacact
tttgaaacggctgtaaaagaaaagatgaaatataatgataaataccagaaagaaagaaat
cttcttaaaggacgcgagtggctgcaagtgcaggcctttaggcccctgaaccaggcggta
ggcagatgcgtcagacaccgtatggactggggagcagttttgctcgtcgatggaaggttc
cagaaacctcagtactcagatcaactgtccaagtgggtgcgcgaatatctacacaaaaat
caccacacatttgaaagcctgttgagcagtgccaatagtttagagtcgttcatgcaacat
atgaagatacaagaaactgaagacacgtga
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