Pieris rapae (cabbage white): 110994297
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Entry
110994297 CDS
T05162
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap03020
RNA polymerase
prap03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
110994297
09124 Replication and repair
03420 Nucleotide excision repair
110994297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prap03021
]
110994297
03019 Messenger RNA biogenesis [BR:
prap03019
]
110994297
03400 DNA repair and recombination proteins [BR:
prap03400
]
110994297
Transcription machinery [BR:
prap03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
110994297
Messenger RNA biogenesis [BR:
prap03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110994297
DNA repair and recombination proteins [BR:
prap03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
110994297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
Motif
Other DBs
NCBI-GeneID:
110994297
NCBI-ProteinID:
XP_022116540
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All DBs
Position
11:7921082..7923686
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AA seq
173 aa
AA seq
DB search
MFYHISLEHEILLHPRYFGPQLLDTVKQKLYTEVEGTCTGKYGFVIAVTTIDSIGAGLIQ
PGQGFVVYPVKYKAIVFRPFKGEVLDAIVTQVNKVGMFAQIGPLSCFISHHSIPADMEFC
PNVNPPCYKSKQEDNVIQEEDVIRLKIVGTRVDATGIFAIGTLMDDYLGLVTQ
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgttttatcacatatcattagaacacgaaatattattacaccctcgatacttcgggcca
caattattagataccgttaagcagaagctttatactgaagttgaggggacatgtaccgga
aagtatgggtttgtaatagcagtgacaacaatagatagcattggggcaggacttattcag
cctggccaaggatttgttgtatatcctgtaaagtataaggcaattgtcttcagacctttc
aaaggagaagtacttgatgctattgtaacacaagtgaataaggtggggatgtttgctcag
attggcccactaagctgctttatttcccaccattcaatccctgctgacatggaattttgt
ccaaatgtcaacccaccatgctacaaaagtaaacaagaagataatgtaattcaagaagaa
gatgttatcagattaaaaattgttggaactagagttgatgcaactggcatttttgcaatt
ggcaccttgatggatgactatctaggtttagtgacacaataa
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