Pieris rapae (cabbage white): 111000675
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Entry
111000675 CDS
T05162
Name
(RefSeq) neurogenic locus Notch protein isoform X1
KO
K02599
Notch 1
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap04320
Dorso-ventral axis formation
prap04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
111000675
09150 Organismal Systems
09158 Development and regeneration
04320 Dorso-ventral axis formation
111000675
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_CA
Ank_2
Notch
Ank
NOD
EGF_3
NODP
EGF_2
Ank_5
Ank_4
Ank_3
DL-JAG_EGF-like
DUF5316
Motif
Other DBs
NCBI-GeneID:
111000675
NCBI-ProteinID:
XP_022125910
LinkDB
All DBs
Position
2:complement(10137546..10255518)
Genome browser
AA seq
2453 aa
AA seq
DB search
MLCSKMWNLIPDYGIKLSMLLLLSMLAARIQSAEGFVSCSPSPCKNGGSCLSTPRGEYFC
NCTSRYAGEFCQHLNPCHSESSPRCQNGGSCRVRLGASGGPPSFACDCPLGFSASLCEIR
VPAACDSAPCLNGATCRLTSLHTYECDCPPGYTGEECSHEDHCASQPCRNGGRCVADNTT
AAGYSCVCPPGFTGSRCTEDVVECSSGSGPCHHGRCFNTHGSYTCVCEPGYTGRDCDAEY
VPCEPSPCLHGGRCTPLDQLRYECDCPSGYRGQNCEIDIDDCPGHLCQNGATCLDGLNSY
TCECPPTFSGTLCETDVDECALRPLVCQNGATCTNTAGGFSCICVNGWTGPECSVNIDDC
AGAACFNGATCIDRVGAFYCKCTPGKTGLLCHLDDACTSNPCHADAICDTSPINGSYTCS
CASGYKGLDCSEDIDECEQGSPCEHDGICVNTPGSFACNCSVGFTGPRCETNVNECESHP
CRNEGSCLDDPGTFRCVCMPGFTGTQCEVEIDECANNPCLNGGVCHDMINAFRCTCVIGF
TGARCQVNIDDCASSPCRNGGTCHDSIAGYTCECPPGYTGMSCETNINDCLSAPCHRGEC
IDGDNSFTCNCHPGYTGRVCQTQINECESNPCQFGGHCEDLIDGYQCRCKPGTSGRNCEI
NVNECYSNPCRNGATCIDGINRYTCECIPGFTGQHCETNINECLSNPCANGGKCIDRING
FRCECPRGYYDARCLSDVNECASNPCINGGTCEDGVNQFICHCLPGYGGQRCERDIDECS
SNPCQHGGTCHDRLNAYKCDCILGFNGVNCETNIDDCAGNPCLHGGSCIDLVNGYRCVCA
PPHSGRNCENTLDPCQPNQCRHGGRCVAEASYAEFNCQCPVGWTGALCERDVDECMVTAP
CHNEATCINTEGSYACLCARGYEGKDCAINTDDCASFPCQNGATCLDSIGDYNCVCASGF
AGKHCEIDVDECQSRPCMNGATCNQYVASYTCTCRLGFSGINCQTNDEDCTDSSCMNGGS
CIDGINSYNCSCPPGYTGSNCQFRINMCDSSPCDNGATCHDHVTYYTCHCPYGYTGKHCE
TFVDWCENNPCENGATCSQKGPQYTCTCAPGWSGKLCDVEMVSCKDASLRKGVKLKQLCN
NGSCEDIGNSHRCHCLDGYTGSYCQKEINECESAPCQNGAQCKDLVGTYQCQCAKGFQGQ
NCELNVNDCLPNPCQNGGTCHDLINNFSCSCPFGTLGKICEINVNDCTQDACHNNGTCID
KVGGFECKCPAGFVGPRCEGDINECLSNPCSIPGTQDCVQLINDYHCNCKPGYMGRHCDA
KVNFCANSPCQNGGICTAIQGGHECLCSDGFYGKNCEYSGYACDSNPCQNGGYCRTSEIG
DYVCDCPSGLSGVNCEIDSMNDCLSNPCKHPEARCIDKPGDYLCYCPRQWTGKTCDIHDP
HSRGGYGSPVTGVYGQSPSLTLQELDLAFQREQCVKMGCKEKQSDHHCDEECNTFACEFD
GNDCSLGINPWANCTAPIKCWEVFMNGECNEVCNTQACLFDGRDCEKSLQKCNPIYDAYC
QKHYANGHCDYGCNNAECNWDGLDCENEPPDLAEGVISVILLMDMRTFKENSVAFLRDLG
HQLRTTILIKKDHLGNDMVYPWKGSTDVGLQDTEFGKKHHIVFTERGQSGVQVYLEIDNR
KCTTLSSSECFFSAREAADFLAATASKHSLSSDFPIYQVKGVPSIINPDLPTNSKYVFIG
VILVLLAGLLIGVLVTAQRKRMQGVTWFPEGFMTNSSSSRRRSRRRGPDGQEMRNLNKGS
MGCIDVDINGGHMVPPHWSDEDDDGAPPRAKRARGPGDSAAPGGYASDHTAITDYEEATH
DPGRVWSQQHLDAADIRVPPSMMTPPAIHDGHVDVNARGPLGMTPLMVAAIRGGGLDTGS
DVEDEQTAHIISELVAQGAQLNAAMDKTGETSLHLAARYARADAAKRLLDAGADANSQDN
TGRTPLHSAVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINADA
DINAADNSGKTALHWAAAVNNVDAVNVLLVHGANRDAQDDKDETPLFLGAREGSYGACKA
LLDAMANREITDHMDRLPRDVAQERMHDDIVRLLDEHCPRPQHHHLMSSPNPHPQLISQP
TVISASATKGKPKKARAKAGPDSPQDQYDTNLQASQIRRKPSVKKSNKRVAQEVPQSVES
LRFSLSPVESPLQNLQDLPSPYDATSLYSNAMAQYPGMEQLVHHKQPPSYEDCVKSGGAL
QFGSSAGASLSPPYSNHSPAHSNQTTSPHAYIGSPSPGKSRPSLPTSPAHMAAMRHHHQH
QLDAAAYSALAHLSANGQHNAQLQAVMTHAAALSHAQAAHHPAITNIMSGLYGSWGMGDT
FPTPSPESPDHWSTPSPQTPLTQSPHSDWSDRAALSPNDMQQSNKGATEAIYI
NT seq
7362 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgctccaagatgtggaacttaataccggattatgggattaaactgtccatgctt
ctcttgctctctatgctagcagcgaggatccaaagcgccgaaggttttgtgtcatgttcg
ccgtcgccgtgcaaaaatggcggatcctgcttgtcgacgccacgcggggagtatttttgc
aattgcacatcaagatacgcgggtgaattttgccagcatttgaacccttgtcacagcgag
tcaagccctcgttgtcaaaatggaggctcttgcagagtgagacttggggctagcggaggt
ccgccatctttcgcctgcgattgtcccctggggttcagtgcgtctttgtgcgagattcgc
gttccagcagcctgtgattcagcgccttgtctgaatggagcaacgtgtcgactgacttca
ctgcatacctatgaatgtgattgcccgcctggatacacaggtgaagagtgctcccacgaa
gaccactgtgcatcgcagccctgtcgaaacggaggtcgttgcgttgctgacaatacaacg
gcggctggatattcctgtgtctgtccacctggcttcaccggctcgcggtgtactgaagac
gtcgtcgaatgttccagcggctccggcccctgtcaccatggacgttgcttcaacacccac
gggtcctatacctgtgtttgtgagccggggtatacgggaagggactgtgatgctgagtat
gttccttgtgaaccgtcaccatgtctgcacggaggaagatgcacgccgttggatcaacta
agatatgagtgcgattgtccttcgggttaccgtgggcagaactgcgagattgacattgac
gactgcccagggcatttgtgccaaaatggcgcaacgtgcctcgatggactgaactcgtac
acctgcgaatgtccaccaacgttttcgggaacactgtgcgagaccgatgtggacgagtgt
gctttgagacctctagtctgccagaacggagccacctgcaccaacacagctggaggcttt
tcctgcatctgtgtcaacgggtggacaggccccgagtgctcagtgaacattgatgactgt
gctggcgccgcctgcttcaacggcgcaacctgcattgatcgagttggtgccttctactgc
aagtgtacgcctggaaaaactggtcttctctgccacttggacgatgcctgcacatcaaac
ccgtgtcacgctgacgcgatctgtgacacaagtcctattaatggttcatacacatgttcc
tgcgcatctggttataagggtctcgattgttcagaggatattgatgaatgcgagcagggt
tctccctgcgaacacgatggcatctgtgtcaacacgcctggttcgttcgcctgcaactgt
tctgtaggtttcacgggaccaagatgtgagactaatgttaatgaatgtgagagccaccct
tgtaggaacgaggggtcatgtctcgacgatccaggaactttcagatgcgtgtgtatgcct
ggttttacgggtactcagtgcgaagttgaaatcgacgagtgcgcaaacaacccttgtctc
aatggtggagtgtgccatgacatgattaacgcatttagatgtacttgtgtaattggtttt
acgggcgcccgctgtcaagtcaacatagatgactgtgcatctagcccatgtcggaatgga
ggcacttgtcatgactccatcgccggttatacctgcgaatgtccacctggatatactggc
atgtcctgtgagacgaacatcaatgactgcctatcagcaccatgccaccgtggtgaatgt
attgatggagataacagcttcacatgcaactgccaccctgggtacacgggccgggtatgc
cagacccagatcaatgaatgcgagtcgaatccttgtcaatttggaggccattgcgaggat
ctaatagacggctaccagtgccggtgtaagcctggtacttctggtcgtaattgcgagatt
aacgtaaacgaatgttactccaacccttgcagaaacggagcaacctgcattgatggaatt
aataggtatacatgtgaatgtattccgggtttcactggccaacactgcgagaccaacatc
aacgaatgtttgtccaacccgtgcgcaaacggcggcaaatgcatagatcgcatcaatggc
ttccgttgcgaatgcccaagaggatactatgacgcgagatgtctgtcagatgtcaacgaa
tgtgcgtctaacccttgtatcaacggtggaacctgtgaagatggagttaatcagttcatt
tgtcattgtctaccaggatatggaggtcaacgttgtgaacgagatatagacgaatgcagt
tccaacccatgccaacatggaggcacttgccatgacagacttaatgcatataaatgcgat
tgtattcttggatttaatggtgtgaattgcgagacaaacatcgatgattgtgctggaaat
ccgtgtctgcacggcggttcttgtatagacctcgtcaacggatatcgatgcgtatgcgca
ccaccacattcgggacgaaactgcgagaatacacttgatccttgtcaaccaaaccaatgt
cggcacggcggcagatgtgtagccgaggcgtcatacgctgaattcaattgccaatgtcct
gtcggttggacgggcgctctctgcgaacgggacgttgacgagtgcatggtgacggccccg
tgccacaacgaagccacctgtatcaacactgaaggctcctacgcatgcttatgtgcgaga
ggctacgagggaaaggattgcgccattaatacggacgattgtgcttctttcccctgtcaa
aacggtgcgacctgcctggacagtattggtgattacaactgcgtatgcgcaagtgggttt
gcggggaaacactgcgagattgacgttgatgagtgtcagtcacgaccctgtatgaatggc
gctacgtgtaaccaatacgtggcatcgtatacctgcacctgtcgactgggtttctcggga
atcaactgtcaaacgaacgacgaggattgcacagactctagttgcatgaacggcggatcc
tgtattgatggcattaactcttacaattgctcttgtccacctgggtacacgggatcaaat
tgccaattccgtataaacatgtgcgatagctctccttgcgacaacggcgctacctgtcac
gaccatgttacttactacacttgccactgtccctatggatacactggaaagcactgcgag
acttttgtcgactggtgtgagaacaatccctgtgaaaatggcgcgacgtgttcgcaaaaa
ggaccgcaatatacgtgcacgtgtgcgcccggatggtccgggaaactctgtgacgttgaa
atggtatcctgcaaggacgctagcttacgaaaaggtgtcaagctaaagcaactctgtaat
aacggctcatgcgaggacataggaaactcccatcgctgtcactgcttagatggttatacg
ggctcctactgtcaaaaggaaattaatgagtgtgagtcagctccatgtcagaacggagca
caatgtaaggacttagttggaacatatcagtgccaatgtgccaaaggattccaaggacag
aactgcgaactaaacgttaatgactgccttccaaacccgtgccagaacggtggaacttgc
cacgatctcatcaacaacttctcttgctcctgcccatttggtactctcggaaaaatctgc
gaaatcaacgtcaatgattgcacacaggacgcctgtcacaacaatggcacctgcatagat
aaagtaggcggctttgaatgtaaatgcccggctggcttcgtcggtcccaggtgtgaagga
gacatcaacgaatgcttgtcgaacccatgctcgattccaggaacacaggattgcgtacaa
ttaatcaatgactaccactgcaattgtaaaccaggttatatgggcagacactgtgatgct
aaagttaacttttgcgcgaattccccttgtcagaatggaggaatttgtacagcgatccaa
ggtggacatgaatgcctatgtagcgatggtttctacggcaagaactgtgaatattccggc
tatgcttgcgattctaacccttgccaaaacggcggctactgtcgaacatccgagattggg
gattacgtgtgcgactgtccttcggggctatctggtgttaattgtgaaattgattctatg
aatgattgtctcagcaacccttgtaaacatcccgaagcgcgttgtattgataaacctggt
gattacctgtgctattgcccaaggcagtggaccggaaaaacttgtgacattcacgaccct
cactccagaggcggttacggaagcccagtaactggagtctacggtcaaagcccgtctttg
actctacaagaattagatctagctttccagagagaacaatgtgtaaaaatgggctgtaaa
gaaaaacaaagtgatcatcattgtgatgaagaatgcaacacttttgcgtgtgaatttgat
ggaaacgattgctctcttggtataaacccgtgggctaattgcactgccccaattaaatgc
tgggaagttttcatgaacggagaatgtaacgaagtttgtaacacccaagcctgtttattc
gatggaagggattgtgagaaatcacttcagaaatgtaacccgatttacgatgcatattgt
cagaagcactatgcgaatgggcactgcgactacgggtgtaataatgcggaatgtaattgg
gatggattggactgcgagaatgaaccgccagatttagctgaaggtgttatttccgtgatt
ctcctaatggatatgagaacgtttaaagagaactcagttgccttcctcagggatttaggt
catcagcttcgtactacgattctgattaagaaagatcatctaggaaacgacatggtgtat
ccatggaagggttcgacagatgtcggtttgcaagacacagaatttggaaagaaacatcac
atagttttcaccgagagaggacagtctggtgtgcaagtgtatttggagattgataacaga
aagtgtacaacactgtctagttctgagtgtttcttctcagcgcgtgaggccgccgacttc
ttggcagctacagcgtcgaaacattccttgtcttcagacttcccaatctaccaagtgaag
ggcgttccttcaataataaacccggatctccctacgaactctaaatacgtatttattgga
gtaattttagttcttttggctggtttgttaatcggtgtcttagtaacagcccaaagaaag
cgtatgcaaggagtaacatggttcccagaaggattcatgacaaacagctcttcatcccga
cgtcgttctagacgacgtggtcctgatggccaggaaatgagaaacttaaataagggatcc
atgggatgtattgatgttgacataaatgggggtcacatggtgccgccacactggtctgat
gaggatgatgatggagctccgccgcgggctaaacgagctcgtggtccaggagactctgcc
gccccaggaggctatgcatcagatcacacagccatcaccgattatgaagaagcaactcat
gatccaggcagagtttggagtcagcaacatttggacgcagcggatattagagtaccacct
agcatgatgactccgccagctatccacgatggacacgtagacgtcaacgcccgtggacct
ctcggcatgactccattgatggtggctgctattcgtggtggaggtctggatactggatct
gatgtcgaagatgaacagacggctcacatcatttccgagcttgtggcccagggagcccaa
ctaaacgctgccatggataagactggggaaaccagcttgcatcttgctgctagatacgca
cgcgcagacgccgcaaaacgtctccttgacgcaggcgcagacgcaaactcacaagacaac
accggaaggacgccattgcactccgctgtcgcagctgatgccatgggagtattccagatc
ctgctgcgaaacagggctaccaaccttaacgccagaatgcacgatggaactactccgctg
attttggctgcaaggctggcaattgaaggcatggtggaagatttgataaacgcagatgca
gacataaacgcagcagacaacagcggaaagacggcgctgcattgggcggccgcagtcaat
aatgttgatgctgtcaatgttctgctggtacatggagccaatagggacgcccaagatgat
aaggatgagacacctctattccttggcgcccgcgaaggctcctacggcgcctgcaaagcc
ttacttgacgcgatggcgaatagagaaataacagaccacatggatcgactgccaagggac
gttgcgcaagagagaatgcacgatgacattgtccggttattggacgaacattgtccgaga
ccgcagcatcatcatctcatgtcatcacccaaccctcacccgcaactgataagtcagcca
acagtgatcagtgcttcagcgacaaagggcaagccgaagaaggcccgagcaaaagcaggg
cccgatagtcctcaagaccaatacgacacaaatttacaggcttcccaaattagacggaag
ccgagtgtaaaaaagagcaataagagagtcgcacaagaagtcccacaaagcgtggaatcc
ctgcgattcagtttgagtcctgtcgagtctccactacaaaatttacaggatctcccgtcg
ccatacgacgccacatcgctgtattccaacgcgatggcccaataccccggcatggagcaa
ctcgtacatcataaacagccgccaagctatgaggactgtgttaagtctggtggcgccctg
caattcgggagtagtgcgggcgcatctctttctccaccgtactccaaccattcgcctgcc
cacagtaaccaaaccacgtcgccacacgcctatataggttccccttctcccggtaagtcc
cggccgtccctcccgacatctcccgcccacatggcggccatgagacaccatcaccaacat
cagttagacgccgcggcgtattcggcgcttgcccatctcagtgcaaacggacaacacaac
gcacaactgcaggcggtgatgacgcatgcagcggctctatcgcacgcgcaggcagctcat
caccccgccatcaccaatattatgtccggtctctatggcagttggggtatgggagacaca
ttcccgacgccttcacccgagtcccccgatcattggtcgactccttccccccaaacccca
ctcacgcagtccccacattcggactggtctgatcgagcagcgctttcgcctaacgatatg
caacaatctaataaaggtgcaacggaagccatttacatttaa
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integrated database retrieval system
