Pieris rapae (cabbage white): 111002885
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Entry
111002885 CDS
T05162
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
111002885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prap03021
]
111002885
Enzymes [BR:
prap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
111002885
Transcription machinery [BR:
prap03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
111002885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
Motif
Other DBs
NCBI-GeneID:
111002885
NCBI-ProteinID:
XP_022128854
LinkDB
All DBs
Position
2:7693699..7712741
Genome browser
AA seq
1129 aa
AA seq
DB search
MDKFNQKKLLQQPTLAYTSNPDFSKPPKIANPYLQCLGAPHIDSFNYMLTDGLKAAIENL
IPVQFQMPSGERVKIQIDDATFSKPSVPMEVVGVKNQRVLPTECRQRAATYKGDFKVRLT
IQYSDNVVTLDRSLGQLPIMIKSKMCHLDNLSPEELIKHNEHGDEWGGYFIVKGHERLAR
MLLVTRRNYPVAIKRSGWKGRGNLFTEFGVLVRSVKADQTATNNVLHFLQNGTCKLMFSH
RKTMYYAPLILIIKCLVDWPDHYIYRLLLHGKKNDLYYVNCVQNMLRELHEQSLHTMEEC
REYVGKMFRAKITELPPWAEDLEATDFLLKHCVMIHLDDYKDKCHALIYMTQKLYDLVQN
KCKVEGADAVMVQELQVGGQLYLQILKERMQNLLLMMKYGFLKRNFGERSIGTEIHQIIK
ASGSLEQRMEMFISTGTAPSNNVNLPQYKGLTIVAENINRQRYMSHFRAIHRGSFFMEMR
TTEARQLLPDAWGFVCPVHTPDGAPCGLLNHLTATAQVTTHLEPKETRLIPSVLEKCGME
PISSVSQTPLENDVYKYPVFLDGRLEGYLDEATAAKSVAYLRTLKVKGEDVPISTEIVLI
PKLQTTSQYAGVFLFTNETRMMRPVINLSTGQLEMIGTMEQLYLDIAVTQTEIIKGKTTH
LELSKSAFMSNLAQLVPMPDCNQSPRNMYQCQMGKQTMGTPIHTWKTNGETKLYRLQTGG
APLFRPLHHDLLSLDDFPSGTNAIIAVISYTGYDMEDAMIINKSAHERGFAAGTVYKSNF
IELDNVNSYFIRDPSKPELAAYIDEDGLPAVGARVNSEDPFYCFFDGDRSQYIVNKYHGK
EEVFVDSVRLCGDFSPRACKKAVVMLRIQRNPTVGDKFASRAGQKGICSQKWPAEDLPFT
ESGLIPDILFNPHGFPSRMTIAMMIECMAGKAACLHGHVHDATPFRFNEKDTAINYFGRL
LEAGGYNYYGTERVYSGVDGREMVADIFFGLVYYQRLRHMVSDKWQVRTTGAVDARTRQP
VKGRRRGGGVRLGEMERDALISHGAAFMLQDRLFHCSDKCQALLCTKCGTLLGPIAVTGG
SKDTCRLCKQGHLVSIAIPYIFKFFVTQLASVNINVKINCVNTLAITAA
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atggataaatttaatcaaaagaagctgttacaacagccaactttggcatatactagtaat
cctgattttagtaaacccccgaaaattgctaacccataccttcaatgcctgggagctcct
cacatagattcctttaattatatgcttactgatggtttgaaagcagctatagagaattta
ataccagttcaatttcaaatgccatctggtgaaagagtaaaaatccaaatagatgatgct
actttttctaaaccaagtgttccaatggaggttgttggtgttaaaaaccagagagtattg
ccaactgaatgtagacagagggcagctacatataagggagattttaaagttagattaaca
atacaatattcagacaatgttgtaacactagatcgctccctgggtcagctacctattatg
attaagtctaaaatgtgccatttagacaatctttcaccagaagaacttattaaacacaac
gagcatggagatgaatggggtggctatttcatagtaaagggtcatgagcgtctagcaaga
atgttgctagttacaagaagaaattacccagttgcaatcaagagatctggttggaaaggt
cgaggtaacttgtttactgagtttggtgtacttgtaagaagtgtgaaagcggatcagaca
gctactaacaatgttcttcacttccttcaaaatggcacttgtaaattaatgttttcgcat
cggaaaactatgtattatgcacctttgatactcattataaagtgtctagttgactggcca
gatcactacatatatagattgctgttacatggaaagaaaaacgatttatactatgttaat
tgtgtccaaaacatgcttcgtgaattacacgaacaaagtctccatacaatggaggaatgt
cgtgaatacgttgggaaaatgttccgggctaaaatcactgagttacccccatgggcagag
gatttggaggccaccgattttctattaaaacactgtgttatgatacacttagacgattat
aaggataagtgccacgcccttatttatatgactcagaagttgtatgatctagttcaaaat
aagtgcaaggtggaaggtgctgatgctgtgatggttcaagagttgcaagtggggggtcag
ttgtatttgcagattttgaaggagcgaatgcaaaatctacttcttatgatgaagtatggc
tttctcaagcggaattttggggagcggagtatagggacggaaatccatcaaataattaaa
gcgtccggttcgttggaacagcgaatggaaatgttcatatcaacgggcacggcgccgtcg
aacaacgtcaacttgccgcagtacaagggactcactatagtcgccgagaatattaaccgg
cagagatatatgtcgcatttcagagcgattcatcgtggttcattcttcatggaaatgcga
acaacggaagctcgccagttattgcctgatgcttggggctttgtttgtcccgttcatacg
cccgatggagcaccatgtggcctgctgaaccatcttactgctacagcgcaggtaacgaca
catttagaaccaaaggaaacaaggcttattccttctgttttagaaaagtgtggaatggaa
ccgataagctccgtttcccaaactcctttagaaaatgacgtatacaaatatccagtgttc
ctcgatgggcgtttagagggttatttagacgaggcgacagcggcaaagtccgttgcctat
cttcgaacactcaaagttaagggggaagatgtgcctataagtacggagattgtgcttata
cctaaacttcagacaacgtcgcaatacgcgggcgtattcctcttcaccaatgagacacgg
atgatgagaccggtgatcaatctctcgactggtcaactggaaatgataggcacaatggag
caactgtatttagatattgctgtgacccaaactgaaattatcaaaggtaaaacaacacat
ttggaactatcaaagtcggcgtttatgagtaatttggctcaactcgttccaatgccagat
tgtaatcagtcacccagaaacatgtaccaatgtcaaatgggtaagcaaacaatgggtaca
cccatacacacttggaagacgaatggcgaaaccaaattgtatcggctgcaaacaggcggc
gcgcccctattccgtcccctccatcacgatttattgagtttggacgactttccttctgga
accaatgccataatcgctgtcatttcttatacgggctatgacatggaagacgcgatgatc
ataaacaaatctgcccatgagcgcggctttgcggccggcactgtatataaatcaaatttt
attgagctggataatgtcaactcttactttatccgagatccgagcaaacccgagctagcg
gcttatatcgacgaggatgggttgccagccgttggtgcaagagttaattctgaggaccct
ttctattgtttcttcgacggcgacagaagtcagtacatagtaaacaaataccacggcaaa
gaggaggtctttgtggatagtgtaaggctttgcggggacttttcgcctcgcgcttgtaag
aaagctgttgtcatgttgaggatacagcgtaacccaactgtaggtgacaaattcgcgtct
cgagcgggtcaaaaaggtatctgttcgcaaaaatggcctgcagaagacctgcctttcacg
gaatctggtttaatcccagatatcctgttcaaccctcacgggtttccttcaagaatgaca
atagctatgatgatcgagtgtatggcgggcaaagcggcctgtttacatggacatgtgcac
gacgcaactccattccgttttaacgaaaaggatacagcaatcaattactttggaaggctt
ttagaagctgggggttataactattatggaacggagagggtctacagtggtgtcgatgga
cgggagatggtagcggatattttctttgggctggtctactaccaacggctgcggcatatg
gtgtctgacaagtggcaggttcgtacaaccggcgcagtggatgctcgtacgaggcagccc
gtgaagggaagacggcgtggaggaggagtgaggctgggagagatggagagagatgctctc
atctctcatggagctgccttcatgctgcaagaccggctgttccattgttcggataagtgt
caggcgttgctctgtacgaaatgcggtacattactaggaccgatagcagttacagggggt
tcaaaagacacgtgtcgtctctgcaaacagggacaccttgtatcaatagctataccctat
atattcaagttcttcgttacccaattagcatcagttaatattaatgttaaaataaattgt
gttaacacgctcgctatcacggcggcttag
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