Pseudomonas resinovorans: PCA10_46820
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Entry
PCA10_46820 CDS
T02708
Symbol
bifA
Name
(GenBank) cyclic-di-GMP phosphodiesterase BifA
KO
K21024
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
pre
Pseudomonas resinovorans
Pathway
pre02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pre00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PCA10_46820 (bifA)
Enzymes [BR:
pre01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
PCA10_46820 (bifA)
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
dnstrm_HI1420
FtsL
Motif
Other DBs
NCBI-ProteinID:
BAN50414
UniProt:
S6BMC8
LinkDB
All DBs
Position
5168915..5170981
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AA seq
688 aa
AA seq
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MKLDLKHSLSLKLLRVVLLSALVVGVVLSCAQIVFDVYKTRQAVSNDANRILGMFRDPST
QAVYSLDREMGMQVIEGLFQHESVRHASIGHPNEPMLAEKDRPLTELPTRWLTDPILGKE
QTFTTQLVGRSPYSEYYGDLSITLDTAPYGEDFVTSSVIIFISGVLRALAMGLVLYLVYH
WLLTKPLSKIIEHLSSINPDRPSEHKLPMLKGNEKNELGLWINTANDLLASIERNTHLRR
EAENSLLRMAQYDFLTGLPNRQQLQQQLDQILEDAGRLQRRVAVLCVGLDDFKGVNEQFS
YQTGDQLLIALADRLRGHSGRLGALARLGGDQFALVQADIEQPYEAAELAQNVLDDLEVA
FSLEQQEVRLRATIGITLFPEDGDSTEKLLQKAEQTMTLAKSRSRNRYQFYIASVDSEMR
RRRELEKDLREALNRGELHLVYQPQVDYRDHRVVGVEALLRWQHPQHGFVPPDLFIPLAE
QNGSIIPIGEWVLDQACRQLREWHDQGFSELRMAINLSTVQLHHAELPRVVNNLLQVYRL
PQRSLELEVTETGLMEDISTAAQHLLSLRRSGALIAIDDFGTGYSSLSYLKSLPLDKIKI
DKSFVQDLLEDEDDATIVRAIIQLARSLGMQVIAEGVETAEQEAYIISQGCNEGQGYLYS
KPLPARELTLYLKQARRLTNAASNPATL
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
ttgaagctggatctcaaacacagcttgtcgctcaagctgctgcgcgtggtgctgctatcc
gcactggttgtcggtgtggtgctgagctgcgcgcagatcgtgttcgatgtctacaagacg
cggcaggcggtgtccaacgacgccaaccgcatccttggcatgttccgcgatccctcgacc
caggcggtctacagcctggatcgcgagatgggcatgcaggtgatcgaaggcctgttccag
cacgaatcggtgcgccacgcctccatcggtcatcccaacgagcccatgctggcggagaag
gacaggccgctgaccgagctgcccacccgctggctcaccgacccgatcctcggcaaggaa
cagaccttcaccacccagctggtcggccgcagcccctacagcgagtactacggcgacctc
agcatcaccctcgacaccgccccctacggcgaagacttcgtcaccagctcggtgatcatc
ttcatctccggcgtactgcgcgccctggccatgggcctggtgctctacctcgtctaccac
tggctgctgaccaagccgctgtcgaagatcatcgagcacctctccagcatcaaccccgac
cgccccagcgaacacaagctgcccatgctcaagggcaacgagaagaacgaactgggcctg
tggataaacaccgccaacgacctgctggcctccatcgagcgcaacacccatctacgccgt
gaagccgagaacagcctgctgcgcatggcccagtacgacttcctcaccggcctgccgaac
cgccagcaactgcaacagcagctcgaccagatcctcgaagacgccggccgcctgcagcgc
cgcgtggcggtactctgcgtcggcctggacgacttcaagggggtcaacgaacagttcagc
taccagaccggcgaccagttgctgatcgccctggccgaccgcctgcgtggccacagcggc
cgcctgggtgccctggcgcggctgggcggcgaccagttcgccctggtccaggccgatatc
gagcagccctacgaggccgccgagctggcccagaacgtgctggacgacctggaagtcgcc
ttctccctggaacaacaggaagtgcgcctgcgcgccaccatcggcatcaccctcttcccg
gaagacggcgacagcaccgagaagctgctgcagaaagccgaacagaccatgaccctggcc
aagagccggtcgcgcaaccgctaccagttctacatcgccagcgtcgacagcgagatgcgc
cgccgccgcgagctggaaaaggacctgcgcgaagccctcaaccgcggcgagctgcacctg
gtctaccaaccccaggtggactatcgcgaccaccgggtggtgggcgtcgaagcgctgctg
cgctggcagcacccgcagcacggcttcgtgccgccggacctgttcatcccgctggccgag
cagaacggctcgatcatcccgattggcgaatgggtgctggaccaggcctgccgccaactg
cgcgaatggcacgaccagggcttcagcgagctgcgcatggccatcaacctgtccaccgtg
cagctgcaccacgccgagctgccccgggtggtgaacaacctgctgcaggtctaccgcctg
ccccagcgcagcctggagctggaagtcaccgaaaccggcctgatggaagacatctccacc
gccgcccagcacctgctgagcctgcgccgctccggtgcgctgatcgcgatcgacgacttc
ggtaccggctactcctcactgagctacctgaagagcctgccgctggacaagatcaagatc
gacaagagcttcgtccaggacctgctggaagacgaggacgacgccaccatcgtccgcgcc
atcatccagctggcgcgcagcctcggcatgcaagtgatagccgaaggcgtggaaacggcc
gaacaggaggcctacatcatttcccagggctgcaacgaaggtcagggctacctctacagc
aagcccctgccggcccgcgaactgaccctctacctcaagcaggcccgccggctgaccaac
gccgcctccaaccccgccacgctctga
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