Plasmodium reichenowi: PRSY57_0820900
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Entry
PRSY57_0820900 CDS
T08079
Name
(RefSeq) clp1-related protein, putative
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
prei
Plasmodium reichenowi
Pathway
prei03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
prei00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PRSY57_0820900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prei03019
]
PRSY57_0820900
Enzymes [BR:
prei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
PRSY57_0820900
Messenger RNA biogenesis [BR:
prei03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
PRSY57_0820900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_N
CLP1_P
Clp1
AAA_24
Motif
Other DBs
NCBI-GeneID:
24530751
NCBI-ProteinID:
XP_012762602
UniProt:
A0A151LJY2
LinkDB
All DBs
Position
8:769177..771243
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AA seq
688 aa
AA seq
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MANNGNTRLYHLKAYHELRIVTLEKSTKYNEKEECIKIRILSSKNIHHKSNERKNTTDNI
NYSAEIFGKELILDKDYTFGYNEKFSIYTYTGCYIQIKGITLQEYESKNNTMKEYVSLCY
ILDAYRKLAKKKKKIGPRILITGNNNSGKSSVSLLLLNYALKSGFKPLYIETDTKASSDK
IELNRGPGVISCFKYDNMNNIVSMYPMTSLNNINNNNNNNNNNNNNNNNNNNNNNNNKNN
NNNNNNNNNVELVNNNNTINVNNNMFDSYMKYSLEYFFGYYDIKEDLSLYYHLNECISSC
IYLMFLNNINKESTDLRNYSNEHEHICSSGFILNVPSEADLEIVQNMIDIYNINIVIIID
NSFLHYSLKKYYHNINEDQQEYINVERENNLIKDRDKKSKQTNRLSEHNSLYDMNVFNGK
GLNPDMRGSIVFTKNKGEDGFYDDQKNEELKRADYNNINININNNNNNNYNNDNMNNMYN
LMYNHQEDEEKKNIQIIGMPKFEGVIPSDNNRIKYCRNLWYYNYFSRDININNYAFKKSH
IISFKYSRTSFVKLDTNLAVPLSALPSDCRDIKRENVSVSLYNGNIKNLINCILAVSYSK
DFTYVHLINIAALIHVQGIKEVQKTQQEQDNEKEKENNNSYVNQDGNNTEQHQDQVDYIF
DILCPTYITLKNLPPFFIIPGNIRQMKF
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggcaaataatgggaatacccgactttatcatctaaaagcgtatcatgaacttcgtatt
gtgactcttgaaaaatctacaaaatataatgagaaggaagaatgtattaagattcgaatc
ttatcaagtaaaaatatacaccacaaaagtaatgaaaggaaaaatacgaccgataatata
aattatagtgctgaaatatttggtaaggaattaattttagataaggattatacatttgga
tataacgagaagttttctatatatacatatactggttgctatatacaaataaaaggaata
accttacaagaatatgaaagtaaaaacaatacgatgaaagaatatgtatctttatgttat
atattagatgcttatcgtaagttagcaaaaaaaaaaaagaaaatcggtcctagaatattg
ataacaggaaataataattctggaaaaagttcggtatcattacttttattaaattatgca
ttgaagtcaggatttaagcctttatatatagagacagatactaaagctagttcagataaa
attgaattaaatcgagggcctggtgtgattagttgttttaagtatgacaatatgaataat
atagtaagtatgtaccctatgacaagtctaaataatatcaacaataataataataataat
aataataacaacaacaataataacaacaataataataacaacaataataataaaaataat
aataacaataataataacaataataatgttgagttagtcaataataataataccatcaat
gttaataataatatgtttgattcgtacatgaaatattctctagaatatttttttggatat
tatgatattaaagaagatctaagcttatattatcatctgaacgaatgtataagtagttgt
atatatcttatgtttttaaataatattaacaaggaatcaactgatttaagaaattatagt
aacgaacacgaacatatatgctcctctggatttatattaaatgtaccatcagaagcagac
cttgaaattgtacagaacatgatagatatatataatattaatattgttattattatagat
aattcttttttacattattcattaaagaaatattatcataacattaacgaagatcaacaa
gaatatattaatgttgagagagaaaataatttaatcaaagatagagataaaaaaagtaaa
caaacgaataggttatctgaacacaattcattatatgatatgaatgtttttaatggtaaa
ggtttgaatcctgatatgcgcggttcaattgtttttactaagaataaaggtgaggatggt
ttttatgatgatcagaaaaatgaagaattaaaaagagcagattataataatataaatata
aatataaataataataataataataattataataatgataatatgaataatatgtataac
ttgatgtataatcatcaagaagatgaagaaaaaaaaaatattcaaataattggcatgccg
aaattcgaaggggttattccttccgataataatcgtataaaatattgtagaaatttatgg
tattataattatttttcaagagatataaatataaataattatgcttttaagaaaagtcat
ataatatcgttcaaatatagtagaactagttttgtaaaattagatacaaatctggccgta
cctttatcggctttaccatctgattgtagagatataaaaagagaaaatgtatccgttagt
ctatataatggaaatattaaaaacttaataaattgtattttagcagtatcttattcaaaa
gattttacatatgtacatcttattaatatagctgcattaattcacgtgcagggtattaaa
gaagtccagaaaacacaacaagaacaagacaacgaaaaggagaaggaaaataataactct
tatgttaatcaggatggaaataatactgaacaacatcaggatcaagttgattatattttt
gatatattatgtccaacatatataacattgaaaaatttacctccattttttataatacct
ggaaatataaggcaaatgaagttctaa
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