Plasmodium relictum: PRELSG_0720600
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Entry
PRELSG_0720600 CDS
T09405
Symbol
RPB3
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3, putative
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
prel
Plasmodium relictum
Pathway
prel03020
RNA polymerase
prel03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
prel00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PRELSG_0720600 (RPB3)
09124 Replication and repair
03420 Nucleotide excision repair
PRELSG_0720600 (RPB3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prel03021
]
PRELSG_0720600 (RPB3)
03400 DNA repair and recombination proteins [BR:
prel03400
]
PRELSG_0720600 (RPB3)
Transcription machinery [BR:
prel03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
PRELSG_0720600 (RPB3)
DNA repair and recombination proteins [BR:
prel03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
PRELSG_0720600 (RPB3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Urocanase
Motif
Other DBs
NCBI-GeneID:
39735543
NCBI-ProteinID:
XP_028532447
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All DBs
Position
7:complement(787484..788473)
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AA seq
329 aa
AA seq
DB search
MITNNDSSNKHKIEITKLTKDEISFVLYNSNYGLANALRRIILSEIPTLAIDVVNVYENT
SSFHDEYLAHRLGLIPIDSRNVNNYEFREKCKCKETCSKCTIQYVIEVKCNNANKIDISH
YDIESLDHEPNVPMPIPHGKKNTKIENAIPIVTLSKNQTLHMKLIATKGIGKMHAKWIPA
NVSYRIDHKIKIKNHLIDKLPQNHKLMLANSLNKDCYILKNSDDDRDVQLKLNENMSVVM
AENCIEILNELGYKDIIKIIYDDTKFHFNVESIGSLPPEQIVEMALEVLENKLKNLEPQI
KSSFYSIDEVAKQLKEQGVSLYGIQLDLE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgattaccaataacgatagttctaacaagcacaaaatagaaataacaaagttaacaaag
gatgaaatatcttttgtgttatataatagtaattatggattagcaaatgcattaagaaga
attatattatcagaaattccaacattagcaattgatgttgttaatgtttatgagaatact
agttcatttcatgacgagtatttagctcatagattaggtttaataccaatcgatagcaga
aatgtaaataattatgaatttagagaaaaatgtaaatgcaaggaaacatgttctaaatgt
actattcagtatgtaattgaagtaaaatgtaacaatgcaaataaaattgatatatctcat
tatgatatcgaatcactagaccatgagccaaatgttcctatgcctataccacatggaaaa
aaaaatacaaaaatagaaaacgctattccaattgtaactttatcaaaaaatcaaacatta
catatgaaattaattgccacaaaaggaataggtaaaatgcatgcaaaatggattcctgct
aatgtttcttatagaattgaccataaaataaaaattaagaaccacttaatagataaatta
cctcaaaatcataagttaatgttagctaatagtttaaataaagattgctacattttaaag
aacagtgatgatgatagagatgtgcaattaaagttaaatgaaaacatgtctgttgtcatg
gctgaaaattgtattgaaattttaaatgagttaggttataaagatataataaaaattatt
tatgatgatacaaaatttcattttaatgtagaatcaattggctcattacctcctgagcaa
attgtagaaatggctttagaagttttagaaaataaattaaaaaatttagaaccgcaaata
aaatcatccttttattctattgatgaagtagctaagcaattaaaagaacaaggagtttct
ttatatggaattcaattagatttagaataa
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