KEGG   Plasmodium relictum: PRELSG_1111400
Entry
PRELSG_1111400    CDS       T09405                                 
Symbol
HMGB4
Name
(RefSeq) high mobility group protein B4, putative
  KO
K03004  DNA-directed RNA polymerase I subunit RPA43
Organism
prel  Plasmodium relictum
Pathway
prel03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:prel00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PRELSG_1111400 (HMGB4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:prel03021]
    PRELSG_1111400 (HMGB4)
Transcription machinery [BR:prel03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Pol I specific subunits
     PRELSG_1111400 (HMGB4)
SSDB
Motif
Pfam: HMG_box_2 HMG_box CBFD_NFYB_HMF Histone TFIID-18kDa Vasculin CENP-X
Other DBs
NCBI-GeneID: 39736890
NCBI-ProteinID: XP_028533770
LinkDB
Position
11:457626..459517
AA seq 248 aa
MDKKKPKVPPSSYLIFCNYERDNVKNSLLEKSDKATIKITDIQKELSNKWKALSEEEKNK
YEEQAQLLKLKYNEELLEWQNYHKEDASDFMNMNNTTKFPIMKIQKIMHLNNNVKKINHE
AINIFQKAIIMFLIELVNKTIEFKNEKNSSRYITSLDIISCIKREGIKYKFLEDCLYLLK
DEGMNTFFLEEDDNEESIFDLCEEDKKEYDYDIEEKKINKMKKKENKTKEKSAKKNVYAD
ITTFFKRM
NT seq 747 nt   +upstreamnt  +downstreamnt
atggacaaaaaaaaacctaaagtacctccatcttcctatttaattttttgtaattatgaa
agagacaatgttaaaaacagtttgttagaaaaatctgataaagcaacaataaaaataact
gatattcaaaaagaattaagtaataaatggaaagccttatctgaagaagaaaaaaataaa
tatgaagaacaagctcaacttttaaagttaaaatacaatgaagaattattagaatggcaa
aattatcacaaagaagatgcatcagattttatgaatatgaataacactactaaattccct
attatgaaaattcagaaaattatgcatttgaataataatgtcaaaaaaattaatcatgag
gctattaatatttttcaaaaagcaataattatgtttttaattgaattagttaataaaacc
attgaatttaaaaatgaaaaaaattcttctcgatatataacatctcttgatataatatca
tgcataaaaagagaaggaataaaatataaatttctggaagattgcttgtacttattaaaa
gatgaaggcatgaatacattttttcttgaagaagatgataatgaagaatcaatatttgat
ttatgtgaagaagataaaaaagaatatgattatgatatagaagaaaagaaaataaataaa
atgaagaaaaaagaaaataaaacaaaagaaaaaagtgcaaaaaaaaatgtatatgcggat
ataacaactttttttaaaagaatgtaa

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