Poecilia reticulata (guppy): 103461761
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Entry
103461761 CDS
T05149
Symbol
scn1a
Name
(RefSeq) sodium channel protein type 1 subunit alpha
KO
K04834
voltage-gated sodium channel type II alpha
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pret04040
]
103461761 (scn1a)
Ion channels [BR:
pret04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
103461761 (scn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
GPHH
Motif
Other DBs
NCBI-GeneID:
103461761
NCBI-ProteinID:
XP_017164755
LinkDB
All DBs
Position
LG2:complement(31904031..31933488)
Genome browser
AA seq
2503 aa
AA seq
DB search
MFNMLIMCTILINCGFMTLSNQPDFAKQVEYTFTAIYTFEFVVKVLARGFCIGKFTFLRD
PWNWLDFCVIVLAYVTEFADIGNLSVLRTFRVLRTLKAISVIPGLKTIVGALFQSVKKLT
DVMILTVFCLSVFALVGLQLFMGHLRNKCIKTTLRAAGKPYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQCQVNLKKAQEKEYEYNIAIEQLKRQQEDAQAMAKAAAATNGDALDKGGG
TESSSEVSKLSSKSAKERRNRRKKRKEEEKGARKISHSDSLDSLPANRFRFSVDEYPLNS
DMKCSSTHQSFLSFRGPLLSSRRHSKTSLFSLQSQTQDVASENEFADDENSIFEGKLSWR
GSPLNASRRDRHSSNVSQCSFLPHLRFQPFGIRHSSIDCNGVVSLLDGNSFPTSLPTGLL
LPNQRIDTASSGNNADTTDTEGKPTSGENYHNSLELPEMRQRALSIASVITTTMEELEES
RQKCPPYWYKFADKFLIWECCPLWLKIKEIVKIIVMDPFTDLAITVCIVLNTVFMAMEFY
PMDPWFTNMLYVGNLVFTAIFTAEMVLKVIALDPYHYFQVGWNIFDGVIVCLSLIELSLA
DVKGMSILRSFRLLRVFKLAKSWPTLNKLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ
LFGKQYKEFGCKISEDRPLPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGKAPCLI
LYMMVMVIGNLVVLNLFLALLLSSFSADNLMSVEDDNELNNLQIAFDRIHRATAFIKLKF
RSCCNGLCIRDKKTSEDKTFGHNGVPNHTIKDLTKNSNGEVTGVDKSGNKYIVNSRSDDS
IMSFINNPSLTVTVPIAAEESDFEMLNTEDFSSFSSNXPECHMVVDGDDDDGQFSASEGS
TVDGLSNGEPAELVPVVEVIKEPHDCFTAGCIQKFKCCQVNVNVGWWKMWWTLRKTCYWI
VEHNWFESFIIFMILLSSGALAFEDIYSEQRKTIKVILEFADKIFTFIFILEMLLKWMAY
GFAKYFTNAWCWLDFLIVDVSLVSLVANALEYSELGPIKSLRTLRALRPLRALSRFEGMR
VVVNALMGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKFYSCENKTSEKTFLPKEVKNKT
ECXMLGNKTAIWKNVKVNFDNVAMGYLALLQVATFKGWMDIMYAAVDSPSKVIKCILFIS
TFQKQSISSIPTAALTVNVQAKLEESRQKCPPYWYKFADKFLIWECCPLWLKIKEIVKII
VMDPFTDLAITVCIVLNTVFMAMEFYPMDPWFTNMLYVGNLVFTAIFTAEMVLKVIALDP
YHYFQVGWNIFDGVIVCLSLIELSLADVKGMSILRSFRLLRVFKLAKSWPTLNKLIKIIG
NSVGALGNLTLVLAIIVFIFAVVGMQLFGKQYKEFGCKISEDRPLPRWHMNDFFHSFLIV
FRVLCGEWIETMWDCMEVAGKAPCLILYMMVMVIGNLVVLNLFLALLLSSFSADNLMSVE
DDNELNNLQIAFDRIHRATAFIKLKFRSCCNGLCIRDKKTSEDKTFGHNGVPNHTIKDLT
KNSNGEVTGVDKSGNKYIVNSRSDDSIMSFINNPSLTVTVPIAAEESDFEMLNTEDFSSF
SSNXPECHMVVDGDDDDGQFSASEGSTVDGLSNGEPAELVPVVEVIKEPHDCFTAGCIQK
FKCCQVNVNVGWWKMWWTLRKTCYWIVEHNWFESFIIFMILLSSGALAFEDIYSEQRKTI
KVILEFADKIFTFIFILEMLLKWMAYGFAKYFTNAWCWLDFLIVDVSLVSLVANALEYSE
LGPIKSLRTLRALRPLRALSRFEGMRVVVNALMGAIPSIFNVLLVCLIFWLIFSIMGVNL
FAGKFYSCENKTSEKTFLPKEVKNKTECVMLGNKTAIWKNVKVNFDNVAMGYLALLQVAT
FKGWMDIMYAAVDSPSKVEEQPEYEVNLKMYIYFVVFIIFGAFFTLNLFIGVIIDNFNQQ
KRKLGGQDIFMTDEQKKYYNAMKKLGSKKPQKPIPRPENKLQGYVFDFVTQQIFDIIIMV
LIWLNMVTMMVEVEGQSKEWETNLKYINIVFIVIFSGECLLKMIALRQYFFINGWNIFDF
IVVILSIVGIFLANVIEKYFVSPTLFRVIRLARIGRVLRLIKSAKGIRTLLFALMMSLPA
LFNIGLLLFLVMFIYAIFGMANFAYVKKEKGIDDLFNFETFGNSMICLFQITTSGGWDLL
LAPILNSKDDIDCNSEMEHPGSNNAKGNCGSPAVGIAFFVSYIIICFLIVVNMYIAVILE
NFGVATEESAEPLSEDDFEIFYEVWEKFDPLATQFVKCSMLSDFADSLAAPLRIPKPNKL
ELISMDLPVVSGDRIHCLDILFAFTKRVLGESGEMDILRGQMEERFMAANPSKVSYEPIT
TTFRQKQEDVSAAVIQRAFRHYTRTKIFDVVRVDAEKDEQLTDKEDSFTEKPVELSTTHK
IEVSGLKDSEPSSTSATPNVNRKHEKDRSEKEVESKDITEQDK
NT seq
7512 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacatgctgatcatgtgtacgatcctcatcaactgtggattcatgactctcagc
aatcaacctgatttcgccaaacaagtagagtacacatttactgcaatctacacctttgaa
ttcgttgttaaggttttagcaagagggttctgcatagggaagttcaccttcttgagagat
ccttggaactggctggacttctgtgtcattgttctggcgtatgtaactgagtttgccgac
atcggaaatctttcagttcttcgtacattcagggtgctcagaacattaaaggcgatttca
gtgataccaggtctaaagacaattgtcggtgcgttgttccagtcagtgaagaagcttact
gatgttatgatcctgaccgttttctgcttgagtgtcttcgcacttgtaggattacagctg
tttatgggacacctgaggaataagtgcataaaaacaacattgcgagcagctgggaaaccc
tacatgatcttttttgtcctggttatattccttggttccttctacttgataaatttaatt
ttggctgtagttgctatggcctatgaggagcagtgccaggtcaacctaaagaaagctcag
gagaaggagtatgaatataatatagccattgagcagctaaaacgtcaacaagaggatgct
caggcaatggcaaaagcagctgcagcaaccaatggagatgctttggacaaaggtggagga
acagagagctcctcagaagtatctaagctgagctccaaaagtgccaaagagcgccgcaac
aggaggaaaaagagaaaagaggaggaaaaaggagccaggaagatatctcattcagactca
ctggacagcttaccagcaaatcgtttccgcttctctgtggatgaatatccgctcaactct
gacatgaaatgttcatctacacaccagtcctttctaagtttccgtggaccactgctctcc
tccagaagacacagcaaaaccagccttttcagtctccaaagtcaaacacaagatgtcgct
tcagaaaatgagtttgcagatgacgagaacagcatttttgaaggcaaactgagttggagg
ggatccccgctgaatgcctcaagacgtgatagacacagcagcaatgtgagccagtgcagc
ttcttaccccatctccggtttcaaccctttgggatcaggcacagctctatagactgcaat
ggggttgtttctctgttggacgggaattcatttcctacatcactgcctacagggcttctt
ctacctaatcagagaatagatacggcctcctccggaaacaatgctgacaccacagacact
gaaggcaaaccgaccagtggggaaaactaccacaacagtttggagttacccgagatgaga
cagagagcattaagtatagccagtgtcatcacaaccaccatggaggaactcgaagaatca
agacagaagtgtcctccttactggtacaaatttgccgacaaattcctcatctgggagtgt
tgtccactatggctgaaaatcaaagaaatagtcaaaataattgtgatggacccgttcacg
gacctagccatcaccgtgtgcattgtactcaacacagttttcatggccatggagttttat
ccaatggatccgtggttcaccaacatgctgtatgtaggaaacctggtgttcacagccatc
tttacagcagaaatggtcctcaaggtcattgcactggacccctatcattactttcaagtg
ggatggaacatttttgatggagtcatagtttgcttaagcttgatagagctctctctggct
gatgtaaaaggcatgtccattctgaggtcatttagattgctgagagtgttcaagttggcc
aagtcctggcccactcttaataarctcatcaaaataattggtaattcagtgggagccttg
ggaaacctgaccctggtgctagccatcattgttttcatctttgctgttgtgggcatgcag
ctgtttggaaaacagtataaggaatttgggtgtaaaatctctgaagaccgccctcttcct
cgatggcacatgaatgacttcttccattcattcctcattgtgttccgagtgctttgtgga
gaatggatagagaccatgtgggactgtatggaggtggctgggaaagccccatgtctcatt
ctctacatgatggtcatggttattggaaatcttgtggtgctgaacttgttcctggccctg
ctgctgagttcattcagtgcagacaatctgatgtctgtagaagatgacaatgagctcaac
aatttgcagattgcgtttgatcgcatacacagagccaccgccttcattaaactgaaattt
cgaagttgttgcaacggtttgtgcatcagagataaaaaaacaagtgaggacaaaacattt
ggacataatggcgtccccaatcataccattaaagacttaactaagaacagtaatggtgaa
gtgactggagtggataaaagtggaaacaagtacatcgtcaacagcaggagtgatgattcc
atcatgtcttttataaataacccaagtctgactgtgaccgttcccattgctgcggaagag
tcagactttgaaatgcttaacactgaggacttcagcagtttttcatccaacrtaccggaa
tgtcatatggttgtcgatggtgatgacgatgacggacagttcagtgcctctgaggggagt
acagtggatggtctatcaaacggagagcctgcrgagcttgtacctgttgtagaagtaatt
aaggaaccacatgattgctttactgctggttgcatccagaaatttaagtgttgccaagta
aatgtgaatgtcggctggtggaaaatgtggtggactctaaggaaaacctgttattggata
gtggagcacaactggtttgagagcttcatcatattcatgattttgctcagcagtggagca
cttgcttttgaagatatatactctgagcagaggaagacaattaaagtgatcttggaattt
gcagacaaaatttttacctttatcttcattctggagatgcttctgaaatggatggcatac
ggatttgccaagtatttcacaaatgcatggtgctggttggacttcctcattgttgatgtc
tccctggtcagtctggtggctaatgctttagaatactcagaacttggtccaatcaaatct
ctgagaacgctgcgagctctgaggcccctcagagctctgtcacggtttgagggcatgagg
gtggtagtcaatgccctgatgggagccattccttctatctttaatgttctgctggtatgc
ctcattttctggctcatcttcagcatcatgggagtaaacctatttgcagggaagttctat
agttgtgaaaataaaacttcggagaagactttcctcccaaaagaagtgaaaaacaaaaca
gaatgtgwmatgttaggcaataagactgccatctggaagaatgtcaaagtcaactttgac
aatgttgcaatgggctaccttgctcttctgcaagttgctacattcaaaggctggatggat
atcatgtatgctgctgtggattctccaagcaaagtaataaaatgtatcttgtttatctca
acatttcagaaacaatcaataagctccatccctacagcagctcttactgtgaatgtgcag
gctaaactcgaagaatcaagacagaagtgtcctccttactggtacaaatttgccgacaaa
ttcctcatctgggagtgttgtccactatggctgaaaatcaaagaaatagtcaaaataatt
gtgatggacccgttcacggacctagccatcaccgtgtgcattgtactcaacacagttttc
atggccatggagttttatccaatggatccgtggttcaccaacatgctgtatgtaggaaac
ctggtgttcacagccatctttacagcagaaatggtcctcaaggtcattgcactggacccc
tatcattactttcaagtgggatggaacatttttgatggagtcatagtttgcttaagcttg
atagagctctctctggctgatgtaaaaggcatgtccattctgaggtcatttagattgctg
agagtgttcaagttggccaagtcctggcccactcttaataarctcatcaaaataattggt
aattcagtgggagccttgggaaacctgaccctggtgctagccatcattgttttcatcttt
gctgttgtgggcatgcagctgtttggaaaacagtataaggaatttgggtgtaaaatctct
gaagaccgccctcttcctcgatggcacatgaatgacttcttccattcattcctcattgtg
ttccgagtgctttgtggagaatggatagagaccatgtgggactgtatggaggtggctggg
aaagccccatgtctcattctctacatgatggtcatggttattggaaatcttgtggtgctg
aacttgttcctggccctgctgctgagttcattcagtgcagacaatctgatgtctgtagaa
gatgacaatgagctcaacaatttgcagattgcgtttgatcgcatacacagagccaccgcc
ttcattaaactgaaatttcgaagttgttgcaacggtttgtgcatcagagataaaaaaaca
agtgaggacaaaacatttggacataatggcgtccccaatcataccattaaagacttaact
aagaacagtaatggtgaagtgactggagtggataaaagtggaaacaagtacatcgtcaac
agcaggagtgatgattccatcatgtcttttataaataacccaagtctgactgtgaccgtt
cccattgctgcggaagagtcagactttgaaatgcttaacactgaggacttcagcagtttt
tcatccaacrtaccggaatgtcatatggttgtcgatggtgatgacgatgacggacagttc
agtgcctctgaggggagtacagtggatggtctatcaaacggagagcctgcrgagcttgta
cctgttgtagaagtaattaaggaaccacatgattgctttactgctggttgcatccagaaa
tttaagtgttgccaagtaaatgtgaatgtcggctggtggaaaatgtggtggactctaagg
aaaacctgttattggatagtggagcacaactggtttgagagcttcatcatattcatgatt
ttgctcagcagtggagcacttgcttttgaagatatatactctgagcagaggaagacaatt
aaagtgatcttggaatttgcagacaaaatttttacctttatcttcattctggagatgctt
ctgaaatggatggcatacggatttgccaagtatttcacaaatgcatggtgctggttggac
ttcctcattgttgatgtctccctggtcagtctggtggctaatgctttagaatactcagaa
cttggtccaatcaaatctctgagaacgctgcgagctctgaggcccctcagagctctgtca
cggtttgagggcatgagggtggtagtcaatgccctgatgggagccattccttctatcttt
aatgttctgctggtatgcctcattttctggctcatcttcagcatcatgggagtaaaccta
tttgcagggaagttctatagttgtgaaaataaaacttcggagaagactttcctcccaaaa
gaagtgaaaaacaaaacagaatgtgtcatgttaggcaataagactgccatctggaagaat
gtcaaagtcaactttgacaatgttgcaatgggctaccttgctcttctgcaagttgctaca
ttcaaaggctggatggatatcatgtatgctgctgtggattctccaagcaaagtagaagaa
cagccagaatatgaagtcaacttgaagatgtacatatattttgttgttttcatcatattt
ggggccttttttaccctcaatctcttcattggtgtcattatagacaatttcaatcaacag
aagagaaagttaggaggtcaagacatcttcatgaccgatgagcaaaagaaatactataat
gctatgaaaaagctgggatcaaagaagccacagaaaccaatcccaaggccagaaaacaag
cttcaaggatatgtttttgattttgtcacgcaacaaatatttgatattataataatggtt
ctgatatggttaaatatggtaactatgatggtggaagtcgaaggacaaagtaaggaatgg
gaaacaaacctcaagtacattaacatagtgtttattgtaatcttctctggagaatgtttg
ctaaagatgattgcacttcgccagtactttttcatcaatggctggaatatatttgatttc
attgtggtgatcctctcaattgttggcatttttcttgcaaatgtgatagagaagtatttt
gtctcaccaaccctgttcagagtgattcgactggctaggatcggccgcgtcctccgcctt
attaaaagtgccaaagggatccgcacgctcttgtttgccttgatgatgtcacttcctgcc
ttgttcaacattggcctcttgctgttcttggtgatgtttatctatgccatctttggcatg
gcaaactttgcctatgtcaagaaggaaaaaggcatcgatgacctttttaattttgagacc
tttggcaacagcatgatctgtttgtttcaaattaccacatcgggaggctgggatctcctt
ctagctcctatcctcaacagcaaggacgatatcgattgtaattctgaaatggagcatcct
ggtagtaataatgctaaaggaaattgtggaagtccagcagtgggaatcgccttctttgtg
agttatatcattatttgcttccttattgttgtgaacatgtacattgccgtyatcctggag
aattttggcgtggccacagaggagagcgctgagccattaagcgaggatgactttgaaata
ttttatgaggtctgggaaaagtttgaccctcttgcaacacagtttgtgaagtgcagcatg
ctttcagactttgcagattctttagccgcaccattacgcattcctaagcccaacaaattg
gagctcatctctatggatctaccagttgtgagtggtgaccgcattcactgcctggatatc
ctgtttgcctttacaaaacgtgtcttgggtgagagtggggagatggacatactcaggggc
cagatggaggagcgtttcatggctgcaaatccatcgaaggtgtcgtatgaacccatcaca
accactttccgccaaaaacaggaggacgtgtcagctgctgttattcagagagctttcaga
cattatactcggaccaagatttttgatgtagtccgtgttgatgctgaaaaggatgaacag
ctgactgacaaagaagattcttttacagaaaaacctgtggaactctctaccacccataaa
attgaagtctcaggtttgaaggactctgagccttcaagtacaagtgcaacaccaaatgtg
aatagaaaacatgaaaaggacagaagtgaaaaggaagtcgagagcaaagacatcacagaa
caagacaaataa
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integrated database retrieval system
