Poecilia reticulata (guppy): 103477103
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Entry
103477103 CDS
T05149
Symbol
polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
103477103 (polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pret03021
]
103477103 (polr1b)
Enzymes [BR:
pret01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
103477103 (polr1b)
Transcription machinery [BR:
pret03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
103477103 (polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
103477103
NCBI-ProteinID:
XP_008428227
UniProt:
A0A3P9N3I3
LinkDB
All DBs
Position
LG15:22733243..22745502
Genome browser
AA seq
1134 aa
AA seq
DB search
MEPSDKWTNLPHGPSLKNLTDGGFGKLKDKQHPAVQDLTKAHIESFNQAVTEGLSRVVLA
IPPMEFMFKQNKVTLAFVEASIHNPVVAKGSICTEMKVYPAECRGRRCSYKGKLVADISW
AINGIPKGIIKQSLGQVPIMVKSKLCNLHGLSPKELVKHHEEAEEMGGYFIMNGIEKVVR
MLIQQRRNYPVAMCRPKWKSRGQGYTQYGISMHCVREEHSAINMNLHYLENGTVMLNFIY
QKELFFLPLGFALKALVDFTDFQIYQELIKGSEDNSFYKTCVSEMLRMVSEEGCTTRSKV
LDYLGERFRVKLSIPEWYTNEQCANFLLNECLCIHLKSDLEKFYLLCFSTRKLFNFAKQE
CMEENPDSLMCQEVLTPGQLYLMFLKEKLTAWLTSVKLSFDKRGTKLTGELSTEHVMKLL
SMGSDLTKPFEYLLATGNLHSKTGLGMLQSTGLCVVADKLNFIRYLSHFRCVHRGAAFAK
MRTTSVRKLLPESWGFLCPVHTPDGEPCGLMNHMTASCEVVTATAYTTALPGLLCSLGVT
PVDGSPGQAFSDCYPVVLDGSVVGWVEADLAPSVADSLRRFKVLGQKKVPPWTEIVLVPK
TGKPSLYPGLFLFTTLCRMMRPVQNLALGKQELIGTFEQLYLNVGILEAEIEPGVSTHQE
LFPHSMLSVVANFIPYSDHNQSPRNMYQCQMGKQTMGFPLHSFTDRSDNKLYRLQTPQSA
LVRPYMYDHYNLDNYPSGTNAVVAVISYTGYDMEDAMIVNKSSWERGFAHGSIYKTELVD
LAEKVKGEDGVVFGAKPGDPKVNGKLDVDGLPHIGSVIQYGDPFYSYINLNTGQSHVSFY
RSQEACVVDNIKVCSNDTGSGRFKRVCITVRVPRNPMIGDKFASRHGQKGILSRLWPAED
MPFTESGMSPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLSHDATPFSFSEQNSALEY
FGEMLRAGGYNYYGTERLYSGLSGQELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKV
TNQPVGGRNIQGGIRFGEMERDALLAHGSSFLLQDRLFNCSDRSVAQVCVDCGSLLSPLL
EKPPPSWSAMRHRKTVCSLCGKSDSVDSVSVPYVFRYFVAELAAMNIKVKLDVK
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggagccttctgataagtggacgaatttgcctcatggaccgagtttgaagaacctgacg
gacggaggcttcgggaaactgaaggacaaacagcaccccgccgtccaggacctcaccaag
gcccacatcgagtcctttaaccaggctgtcaccgagggactctctcgggtcgtcctggcc
atcccgcccatggagttcatgttcaaacagaacaaagtgaccctagcctttgtggaagct
tccatccacaacccagtggtcgccaagggcagcatctgcaccgagatgaaggtttacccc
gcagagtgccgaggcaggaggtgctcctacaaaggaaagctggtggcggacatcagctgg
gcgatcaacggcatcccaaaaggaatcatcaagcagtccctgggtcaggtaccgatcatg
gtgaagtccaagctctgcaacctccacggcttgtcgcctaaggagctcgtaaagcatcat
gaagaggcagaggaaatgggaggttacttcatcatgaacggcatcgagaaggtcgtccgc
atgctgatacagcagaggaggaactatccggtcgccatgtgcaggcccaagtggaagagc
cgcggtcagggatacacccagtacggtatctccatgcactgcgtgagggaggagcactcg
gccatcaacatgaacctccattacctggagaacggcaccgtgatgctgaacttcatctac
cagaaggagctgttcttcctgccgctcggcttcgctctgaaggctctggtggacttcaca
gatttccagatctaccaggagctgatcaaaggtagcgaggacaactccttctataagacc
tgcgtgtcagaaatgctgcgcatggtgtcggaggagggctgcaccacccgcagcaaggtg
ctcgactacctgggcgagcgcttccgggtcaagctgagcataccggagtggtacaccaac
gagcaatgcgccaacttcctgctaaacgaatgcctctgcatccacctgaagtcggacctg
gagaagttctacctgctgtgcttctcgacccggaagctattcaacttcgccaagcaggag
tgcatggaggagaacccggacagcctgatgtgccaggaggttctgactccgggtcagctc
tacctcatgttcctgaaggagaaactaacggcgtggctaacgtcggtgaagctttccttc
gataagcgagggaccaagctgaccggcgaactgagcactgagcatgtgatgaagttgttg
agcatggggtcggatttaaccaaaccgtttgaatatctgctggccaccgggaacctgcac
tccaaaacaggtctcggcatgctgcagagcacgggcctgtgcgtcgtggctgacaagctg
aacttcatccgctacctgtcgcacttccgctgcgtccacagaggcgccgccttcgccaag
atgaggacgacgtcggtcaggaagctgctgccggagtcctggggcttcctgtgtccggtc
cacacgccggacggcgagccctgcggcctcatgaaccacatgacggcgagctgcgaggtc
gttaccgccaccgcctacaccaccgcgctgccgggactgctctgttcgctgggtgtcacc
ccggtggacggttctccgggtcaggccttctctgactgctacccggtggttctggatggg
tccgttgtcggttgggtcgaagctgatttggctccgtccgtcgccgactcgctgcgccgc
tttaaggttctgggacagaaaaaagtccctccctggactgagatcgtcctggttcctaaa
accgggaagcccagtttgtatccgggcctgttcctcttcactacgttgtgccgcatgatg
cgacccgtccagaatttggctcttgggaagcaagagctgattggcacgtttgaacagctt
tacctcaacgtgggaatcctggaggcggagatagagccgggtgttagcacgcaccaggag
ctgttcccccacagcatgctcagcgtggtggccaacttcatcccctactccgaccacaac
cagagccccaggaacatgtaccagtgccagatggggaagcagacgatgggattcccgctg
cactcgttcacggatcgctccgacaacaagctgtaccggctccagacgccgcagagcgct
ctggtccggccctacatgtacgaccactacaacctggacaactacccgagcggcaccaac
gccgtcgtcgccgtcatctcctacacgggctacgacatggaggacgccatgatcgtgaac
aagtcgtcgtgggagagaggcttcgctcacgggagcatctacaagacggagttggtggac
ctggcggagaaggtgaagggagaggacggcgtcgtgttcggggccaagccgggcgacccg
aaagtgaacgggaagctggatgtggacgggttgcctcacatcgggtcggtgattcagtac
ggagacccgttctacagctacatcaacctgaacacgggacaaagccacgtcagcttctac
aggagccaagaggcttgtgtcgtcgacaacatcaaggtctgcagcaacgacacgggatcg
ggtcgcttcaaacgcgtctgcatcaccgtccgagtgccgcgtaacccaatgatcggtgac
aagttcgccagccgccacggccagaagggcatcctgagccgcctgtggccggccgaggac
atgccgttcaccgagagcggcatgagcccggacatcctcttcaacccgcacggctttccg
tcccgcatgaccatcgggatgctgatcgagagcatggccgggaagtcggccgccctgcac
ggcctgagccacgacgccacgccgttcagcttctccgagcagaactccgcgctggagtac
ttcggggagatgctgcgcgccggcggctacaactactacggcacggagcggctctacagc
gggctgagcggccaggagctggaggccgacatcttcatcggcgtcgtgtactaccagcgg
ctccgccacatggtgtccgataagttccaggtgcgcacgacgggagcgcgggataaggtg
accaaccagccggtgggaggaaggaacatccagggtgggattcggttcggggagatggag
cgggacgcgctgctggcccacggctcgtccttcctgctgcaggaccggctgttcaactgc
tcggaccgctccgtggcgcaggtgtgcgtggactgcggcagcctgctgtcgccgctgctg
gagaagccgccgccgtcctggtcggccatgcgccaccggaagacggtgtgcagtttgtgc
gggaagagcgactccgtggactccgtgtctgttccgtacgttttccgttacttcgtggcc
gagctggcagcgatgaacatcaaagtcaaactggatgtgaagtga
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