Candidatus Peribacter riflensis: PeribacterA2_0003
Help
Entry
PeribacterA2_0003 CDS
T04147
Name
(GenBank) lysyl-tRNA synthetase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
prf
Candidatus Peribacter riflensis
Pathway
prf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
prf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PeribacterA2_0003
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
prf01007
]
PeribacterA2_0003
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
prf03016
]
PeribacterA2_0003
Enzymes [BR:
prf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
PeribacterA2_0003
Amino acid related enzymes [BR:
prf01007
]
Aminoacyl-tRNA synthetase
Class I (A)
PeribacterA2_0003
Transfer RNA biogenesis [BR:
prf03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
PeribacterA2_0003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
Anticodon_2
tRNA-synt_1g
Motif
Other DBs
NCBI-ProteinID:
ALM09401
UniProt:
A0A0S1SM81
LinkDB
All DBs
Position
complement(948..2549)
Genome browser
AA seq
533 aa
AA seq
DB search
MQWVDSIVGEIEQRFAAEIKAGKPLILRDEKTLSGRVHVGSLRGIVIHGVLAQVLKEKGV
ACDFLFELNDFDPMDELPATLTNREEFRQYMGQPLFTVPSPDPKKAPNYPLVFGNELQEV
VKGLQIPITYYPLAPLYKEGKFNEVIRDALDHATEIRTIYRAVSGSLKPEDWYPLQVICE
QCGKVGTTQVTGWDGKLVTYACKPDLVKWAKGCGHSGTVSPFDGHAKLPWKVEWPAKWKV
MNVKIEGAGKDHSAAGGSRDIGRRICEEIFHYPEPLNIPYEFFNIAGKKMSASKGLGASA
KEVSDLLPPKILKLLMIRKQPNQPIDFDPEGVTIPQLFDEHDRLADYAFGRQEKPEPDFA
RTFTLTQTDFPKKPADLWHMRFTLVAFIVQMPHLALPEEAEKAKGSALTEAEKSNLQERA
DYAKRWLKALAPAQFRFTFVQDADFAPEELPALSAAQKQAFTMIHRQLKETPWTGEEVHK
VLHAVKTELNMPPKEIFAPLYQLFFKRDDGPQMGWLLSTLPKEEVLKRIGLYS
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgggtcgattccatcgtcggggagatcgaacagcgcttcgcggcggaaatcaaa
gcaggcaagccgctgatcctcagagatgagaagacgctttcgggccgcgtgcacgtgggc
tcgctgcggggcatcgtcatccatggcgtgctcgcacaggttctgaaggaaaaaggggtt
gcgtgcgacttcctcttcgagctcaacgacttcgacccgatggatgaactgccggcgaca
ctgacgaatcgcgaggaattccgccagtacatgggccagccgctcttcacggtcccttcg
cctgatccgaagaaagcgccgaattacccgctggtcttcggcaacgaactgcaggaagta
gtgaaggggctccaaattccgattacgtactacccgctcgctcctctctataaggaaggg
aagttcaatgaggtcatccgcgatgcattggatcacgcaactgagattcggacgatctac
cgcgcagtgagcgggagtctgaagccggaagactggtatccgctccaggtgatctgcgag
cagtgcggcaaggtcggaacgacgcaggtaaccggctgggacgggaaactcgtcacctac
gcctgcaagccggatctggtgaaatgggccaaaggatgcggccacagcggaaccgtgagc
ccgtttgacggtcatgccaagcttccgtggaaggtggaatggccggccaagtggaaggtg
atgaacgtgaaaatcgaaggagcgggtaaggatcattccgccgccggaggttcgcgcgat
atcggccggcgcatctgcgaggaaattttccactaccccgagccgctcaatatcccctac
gaattcttcaacatcgccggcaagaagatgagcgcaagcaaggggctcggcgcttcggcc
aaggaagtgtcagatctgcttcctccaaaaatcctgaagctcctgatgattcgcaaacag
cccaaccagccgatcgatttcgacccggagggcgtgacgattccgcagctcttcgatgag
catgaccgtctggcggattacgctttcggcaggcaggaaaaaccggaacctgacttcgcc
cgcacgttcaccctcacacaaacggatttcccgaagaaacctgcagatctctggcacatg
cgcttcacgctcgtggccttcatcgtgcaaatgccgcacttagccctgccggaagaagcg
gaaaaggcaaagggttcagccctgacagaagccgaaaagtcgaaccttcaggaacgcgcg
gattacgcgaaacgctggctgaaagccctcgcgcccgcccagtttcgattcaccttcgtt
caggacgcagactttgcccccgaggagctccctgccctttccgcagcacagaagcaggct
tttacgatgatccatcggcaattgaaagagaccccctggacaggcgaggaagtgcacaag
gtgctgcatgcggtaaagacggaattgaacatgccgccgaaggaaattttcgccccgctc
taccagctcttcttcaagagagatgacggcccgcagatgggctggctgctctcgaccttg
ccgaaggaggaagtgttgaagcgcattgggctctattcttga
DBGET
integrated database retrieval system
