Providencia rettgeri: RB151_016240
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Entry
RB151_016240 CDS
T04571
Symbol
ydiO
Name
(GenBank) putative BsuMI modification methylase subunit YdiO
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
prg
Providencia rettgeri
Pathway
prg00270
Cysteine and methionine metabolism
prg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
prg00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
RB151_016240 (ydiO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
prg03000
]
RB151_016240 (ydiO)
03032 DNA replication proteins [BR:
prg03032
]
RB151_016240 (ydiO)
03036 Chromosome and associated proteins [BR:
prg03036
]
RB151_016240 (ydiO)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
prg02048
]
RB151_016240 (ydiO)
Enzymes [BR:
prg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
RB151_016240 (ydiO)
Transcription factors [BR:
prg03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
RB151_016240 (ydiO)
DNA replication proteins [BR:
prg03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
RB151_016240 (ydiO)
Chromosome and associated proteins [BR:
prg03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
RB151_016240 (ydiO)
Prokaryotic defense system [BR:
prg02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
RB151_016240 (ydiO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-ProteinID:
APC11304
LinkDB
All DBs
Position
complement(1823008..1824435)
Genome browser
AA seq
475 aa
AA seq
DB search
MLPIVSPSVVTKQLAFNRVGDKRKVRVSSNFLDVMGFKPGMGIAVEPGEGMGGFSVIPAT
DELQTHQVYQRRYQPKSRSNNPLETVIEFSGQGLIDKCFPRYTERFHVEMRKGRVVFTPV
ANRAFAIADRFRKTSPFRAFVALTGGVDIHVMEALGWKAEIVLEHRPVEARDRASGRNLS
EVHALNTLVNSSPRILLNEDIHHLELDRLGALLAECPPIGLAHYSLGCDDHSNAKSPRDK
ERSLEDLSTMLDMVYPALKQIEVVNPAVVLVENVPNFKASGAGAMMGTTLRRMGYFLTEM
VLNGLDFGAYQGRERYYMVASVFPGFVPPKPEQRAGGRLWPVIEKHLGDCADVTVLKSIQ
ARESTSRRMPAFLTRESTSCPTILKSQDRGVKDAVYIQDGGRIYKPSVDLVQELMSIPDS
FDVSWMAKEQATETLGQSVDYRLHSAVMAAVRDHLNVNCGRHTVVQHGIRSKEGR
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgttaccgatcgtctccccctccgtagtaaccaaacaacttgcgttcaatcgagtaggc
gataaacgcaaggttagggtttcgtccaactttttggatgttatggggttcaagccaggt
atgggcatcgccgttgagccaggggaggggatgggcggtttttcggtgatcccagcgacc
gatgaactacagacacaccaggtttatcagcgccggtatcaaccaaagagtcgctccaac
aacccgctggaaaccgttattgagttttctggacaagggctcatagataagtgcttccct
cgctatacagagcgtttccacgtcgaaatgcgaaaaggccgagtagtcttcactcctgtc
gcaaacagagcctttgccattgcggatcggttcagaaaaaccagccctttccgtgccttt
gtggcattgactggcggggtagacattcatgttatggaagcgcttggctggaaggctgag
attgttttggagcatcgtccagttgaagccagagacagagcatccgggcggaacctgagt
gaagtacatgcgctcaatacgctggtgaacagctccccgcgtatcctgctgaatgaagac
attcatcacctggagctggatcgccttggagccttgctggcggagtgcccaccaattggt
ttggcccattactcgttggggtgtgatgaccactcaaacgccaaaagtccaagggacaaa
gagcgttctcttgaggatctctccaccatgctcgacatggtttacccggcactaaaacag
atcgaggtcgtgaaccctgccgtcgtgctggtggaaaacgtcccgaacttcaaagcatcc
ggagccggggcgatgatgggaacgacactgcggcggatggggtacttcctcactgagatg
gtcttgaacggtctggatttcggcgcttaccaggggcgagaacgctattacatggtggcg
tcggtcttccctgggttcgttccaccgaaacctgagcagagagctggtggacgattgtgg
ccggtgatcgagaagcacctcggggattgtgctgacgtcacagtgttgaagtcaattcag
gccagagagtcaacttctcgcaggatgcctgcgttcttgacgagagaaagcaccagttgc
ccgaccatcctcaagtctcaggatcgtggggtaaaggatgcagtgtacatccaagacggt
ggccgcatttacaagccatcggtcgatctggttcaggagttgatgtcgatacctgatagc
tttgatgtttcgtggatggcaaaagaacaagcgacagaaacgcttgggcagagtgtggat
tacagattgcattcagcggtcatggccgcagttcgggatcacctgaatgtgaattgcggt
cgccataccgtggtgcagcacggtatcagaagtaaggaaggtagataa
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