Pseudomonas rhizosphaerae: LT40_00945
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Entry
LT40_00945 CDS
T03339
Name
(GenBank) FAD-dependent cmnm(5)s(2)U34 oxidoreductase
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
prh
Pseudomonas rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
prh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
prh03016
]
LT40_00945
Enzymes [BR:
prh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
LT40_00945
Transfer RNA biogenesis [BR:
prh03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
LT40_00945
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DAO
Methyltransf_30
NAD_binding_8
FAD_binding_3
GIDA
3HCDH_N
Pyr_redox
Pyr_redox_2
FAD_binding_2
HI0933_like
FAD_oxidored
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
AIS16049
UniProt:
A0A089YKE0
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Position
complement(196847..198820)
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AA seq
657 aa
AA seq
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MKTPSTLAQLDWTDTGHPRSRAFDDVYFAADGLAETRYVFIEQNQLAARFAALPDDGRLV
IGETGFGTGLGFLCAWQCFTASAAPGARLHFVSVEKYPLSAADLTRALALWPELSTYSQA
LLRQYVAVHEGFQRLVFEGGRVTLTLLIGDALEQLPCLEGQVDAWFLDGFAPARNPEMWT
PELFAELARLAAPGATLATFTSTGWVRRGLAAVGFKMKRVAGIGHKWHVSRGVFLGDGCA
TAPAAKPWFARPEPLAGERHALVIGAGLAGCATAASLVARGWRVSLLERHGEVAQEASGN
PQGVLYLKLSAHGTALSQLILAGFGHTRRLLEQLQRGPDWDACGVLQLAFDDKEAQRQQQ
LADAFQPELLHRLDRLQAEAHAGVELPSGGLFYPEGGWVHPPALCLHLVRHPRITLLRHH
QVAALRQVDGHWQAWEGDRLLASAPVVVLACAAHVDAFAQTAALPLKRIRGQITRLPETA
CSAALSTVVCAEGYVAPARSGEHTLGASFDFHSDDLTPSHRDNLDNLALLEAISPDLARR
LDTASLPAEQLQGRAGFRCTSPDYLPIIGPVADAQAFAERFAILAKDARQVPEQPCPWLP
GLYVNSGHGSRGLITAPISGELIAAWLDDEPLPLPREVAWACHPNRFALRRLIRNKA
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccccgagcaccctcgcccagcttgactggaccgacaccggccacccccgatcg
cgcgcgttcgacgacgtctatttcgccgcggacggtctggctgaaacccgctacgtgttc
atcgagcagaaccagctggcggcacgcttcgccgccctccccgacgacggccgtctggtc
atcggcgaaaccggcttcggcaccgggctgggtttcctctgtgcctggcagtgcttcacc
gcctcggccgcacctggcgcccgcctgcatttcgtcagcgtggaaaaatacccgctgagc
gccgcagacctgacccgcgccctggccctgtggccagagctttcgacctacagccaggca
ttgctgaggcagtacgtggccgtgcatgaaggtttccagcgcctggtcttcgagggcggc
cgggtcaccctgacgctgctcatcggcgatgcgctggagcagctgccgtgcctggagggc
caggtcgatgcctggtttctggatggcttcgccccggcgcgcaatcccgagatgtggaca
cccgagctgttcgccgaactggcgcggctggcagcaccgggcgccacgctggcgacgttc
accagtaccgggtgggtgcgtcgcggcctggcggcggtcggcttcaagatgaaacgggta
gcgggcatcggccacaaatggcatgtgtccagaggcgtgttcctgggcgatggctgcgcg
acagcacctgcggccaagccgtggttcgcccgccccgaaccgcttgccggtgagcgccac
gcgctggtcatcggcgccggcctggcgggatgcgccacggccgccagcctggtcgcacgc
ggttggcgggtgtcgctgctggaacgacatggcgaggtcgcccaggaggcttcgggcaat
ccccagggcgtgctgtacctgaagctctcggcccacggcacggccctttcgcagttgatc
ctggcaggcttcggccacactcgccgcctgctcgaacagctgcaacgcgggcctgactgg
gacgcctgcggcgtgctgcaactggccttcgacgacaaggaagcgcaacgtcagcagcaa
ctggccgatgcgttccagcccgaactgctgcaccgattggatcgcctccaggccgaggca
catgccggtgtcgagttgcccagcggcggcctgttctaccccgaaggaggctgggtccat
ccgcccgcgctgtgcctgcacctggtgcgacacccgcgcatcaccctgttgcgtcatcac
caggtggccgcgttgcgccaggtcgatggccactggcaggcctgggaaggcgaccgactg
ctggccagcgccccggtggtggtgctggcctgtgccgcgcacgtcgatgcttttgcccag
accgccgcactgccgctcaagcgcattcgcgggcagatcacccgcctgcctgaaacggcg
tgcagcgctgcgctgtcgacggtggtctgcgccgagggctacgtggcccctgcccgatcg
ggcgaacatacgctgggcgccagcttcgacttccacagcgacgatctgacacccagccat
cgcgacaacctcgacaacctggccttgctcgaggccatctcgccggatctggcacgacgc
ctggacaccgcatcgttgcccgccgaacaattgcagggccgggccggatttcgctgtacc
agccccgactacctgccgattatcggcccggtggccgacgcccaggcgttcgccgagcgc
ttcgcgattctggccaaggatgcccgccaggtgcctgagcagccgtgtccttggctgccg
gggctgtacgtcaacagcgggcatggttcacgggggctgatcaccgccccgatctcgggt
gaactgattgctgcctggctggacgacgaacctctaccgctgccgcgcgaggtggcctgg
gcgtgtcatcccaatcgtttcgcgctgcgtcggctgatacgcaacaaagcttga
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