Pseudomonas rhizosphaerae: LT40_20085
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Entry
LT40_20085 CDS
T03339
Name
(GenBank) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
prh
Pseudomonas rhizosphaerae
Pathway
prh00330
Arginine and proline metabolism
prh00480
Glutathione metabolism
prh01100
Metabolic pathways
prh01110
Biosynthesis of secondary metabolites
prh04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
prh00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
LT40_20085
09106 Metabolism of other amino acids
00480 Glutathione metabolism
LT40_20085
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
LT40_20085
Enzymes [BR:
prh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
LT40_20085
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
AIS19562
UniProt:
A0A089YYM6
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Position
complement(4453803..4454966)
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AA seq
387 aa
AA seq
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MSINVEDYFARDTFNKMKAFADKQETPFVLIDTAMISKAYDDLRAGFEFAKVYYAVKANP
AVEIIDLLRDKGSSFDIASIYELDKVMNQGVGPERISYGNTIKKSKDIRYFYDKGVRLYA
TDSEADLRNIAKAAPGSKVYVRILTEGSTTADWPLSRKFGCQTDMAMDLLILARDLGLVP
YGISFHVGSQQRDISVWDAAIAKVKVIFERLKEEDGIVLKLINMGGGFPANYITRTNSLE
TYAEEIIRFLKEDFGDELPEIILEPGRSLIANAGILVSEVVLVARKSRTAVERWVYTDVG
KFSGLIETMDESIKFPIWTEKKGEMEEVVIAGPTCDSADIMYEHYKYGLPLNLAIGDRLY
WLSTGAYTTSYSAVEFNGFPPLKSFYI
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcaacgtcgaagactacttcgcacgcgataccttcaacaagatgaaggcgttc
gccgacaagcaagaaacccccttcgtactcatcgataccgccatgatcagcaaggcctac
gatgacctgcgcgccgggttcgaatttgccaaggtgtattacgcggtcaaggccaacccg
gccgtggagatcatcgacctgctgcgcgacaagggttcgagcttcgacatcgcctcgatc
tacgagctggacaaggtcatgaaccagggcgtgggtccggagcgcatcagctacggcaac
accatcaagaaatccaaggacatccgctacttctacgacaagggtgtgcgcctgtacgcc
acggactccgaagccgacctgcgcaacatcgccaaggccgcaccgggttcgaaggtctac
gtgcggatcctcaccgaaggctcgaccacggccgactggccattgtcgcgcaagttcggc
tgccagaccgacatggccatggacctgctgatcctggcacgcgacctgggcctggtgccc
tacggcatctccttccacgtcggctcgcagcagcgcgacatcagcgtctgggacgcggcg
atcgccaaggtcaaggtgatcttcgaacgcctcaaggaagaagacggcattgtcctcaag
ctgatcaacatgggcggcggcttcccggccaactacatcacccgtaccaacagcctggaa
acctatgccgaggaaatcatccgttttctcaaggaagacttcggtgacgagctgccggaa
atcatccttgaaccaggccgttcgttgatcgccaacgccggcatcctggtcagtgaagtg
gtgctggtagcccgcaagtcgcgtaccgcggtcgagcgctgggtgtacaccgacgtgggc
aagttcagcggcctgatcgaaaccatggacgagtccatcaagttcccgatctggaccgag
aagaaaggcgagatggaagaagtggtgatcgccggcccgacctgcgacagcgccgacatc
atgtacgagcactacaaatacggcctgccgttgaacctggccatcggtgaccgcctgtac
tggctgtccaccggtgcctacaccaccagctacagtgcggtggaattcaacggcttcccg
cctttgaagtcgttctacatctaa
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