Pseudomonas rhizophila: CRX69_24265
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Entry
CRX69_24265 CDS
T09779
Name
(GenBank) choline dehydrogenase
KO
K03333
cholesterol oxidase [EC:
1.1.3.6
]
Organism
prhz
Pseudomonas rhizophila
Pathway
prhz00984
Steroid degradation
prhz01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
prhz00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00984 Steroid degradation
CRX69_24265
Enzymes [BR:
prhz01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.3 With oxygen as acceptor
1.1.3.6 cholesterol oxidase
CRX69_24265
BRITE hierarchy
Motif
Pfam:
GMC_oxred_C
GMC_oxred_N
DAO
Abhydrolase_1
Pyr_redox_2
Abhydrolase_6
FAD_binding_2
FAD_oxidored
NAD_binding_8
FAD_binding_3
HI0933_like
Pyr_redox
GIDA
Thi4
Fer4_9
Hydrolase_4
DUF4917
Fer4_2
Fer4_6
Lycopene_cycl
GDI
Motif
Other DBs
NCBI-ProteinID:
AVU78134
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All DBs
Position
complement(5335834..5339286)
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AA seq
1150 aa
AA seq
DB search
MTRISTPISEIKEHYDVIVIGSGYGGGIAASRLSRAGRKVCLLERGREIQPGEYPNTMLA
ATEELQVHDPDGHIGSRTGLFDLHVNAQQNVVVGCGLGGTSLINANVSLEPEPGVFEDSR
WPQAVRDHCDTLLKDGYARAREMLKPNPYPDASPNLPKLDANRKSASYLKQDAHFYKPPI
NVTFDKLPNNLNHVGVEQLPCNGCGDCVSGCNNKAKNTTLMNYLPDAWNHGAEIFCQAQV
RHLERDGDGWIVHFQYLDSGRELFSAPTLFVRADIVVVSAGTLGSTEIMLRSRDKGLSMS
SQLGENMSGNGDILGFGHNCDQTINGIGFGAHSAKELEPVGPCITSIIDMRTEGDWRSRM
VIEEGSIPGALGRPMVPSMAAFAGMIGVPTDTGLGASLKYKAREAESFLRGPYYGALHNM
QTYLIMSHDNGKGRMVLDNKDQLRIDWPGVGEQENVTLGNERLHQSTKALGGIWVENPIW
TKLLKHSIVSVHPLGGCVMGEDATQGVVNHKGQVFSGASGTDVYPGLYVTDGAVIPTSLA
VNPLLTISAVSERNMGLLAADRGWIIDYTLPSAPRKPVAAPTLGVQFTETMKGYFSTAFT
QPQGTDLSLYEAAAKRGKADNSPIEFTLTITAADLNRLIKEPEHAATLVGTLDAPMLSPK
PLVASNGVFNLFEQYQEQVDVRHMNYDMKLTAEDGSDYYFSAFKTVPEDNGVLNIWHDTS
TLYVTLYRGPDKSGEVIGSGVMHILPADFAKQMTTMKVLNARNERERVEALARFGKFFAG
ILWESYGGVFAGDVYFNPDAPPRSKRPLDAPAPTVHFFQTEDNVELRLTRYQAGSKGPVM
LVHGLGVGSNIFSTDTIQTNLLEYLCKHEYDVWLLDLRVSILLPASKHEWNGDQVAQYDF
KAAIEQIQQATLARDVQCVVHCYGATTFFMSMLAGLQGVRSVVCSQIAADTVVATATGLK
AGLHLPGMLDAIGIKSLTAYADTKESWFNKLYDKALNGYARIEAQGYCTNPVCHRITFMY
ASLYRHDTLNETLHDNLHELFGESNIQTFEHLALIVRKGHLVDFKGNDVYMPHFDRLKLP
ICFISGAENQCYLPQSTLKTYERLCDMHGPQLFSRHEVPGYGHIDCIFGKDAVVDVYPII
LEHLEKTALG
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgacacggatctcgacccccattagcgaaatcaaggagcattacgacgttatcgtcatt
ggttccggctacggcggtggcattgctgcgtcacgcctgtcccgggctgggcgcaaggtt
tgtctgctggagcggggccgggagatccagcccggcgaataccccaacaccatgcttgcg
gccaccgaagagttgcaggtgcatgacccggacggtcacatcgggtcgcgcaccggactg
ttcgacctgcacgtcaacgcccagcagaacgtggtggtcggttgcggcctgggcggcact
tcgctgatcaacgccaacgtttcgctggagccggagcccggtgtgttcgaggactcgcgc
tggccgcaggcggtgcgtgaccattgcgacacgctgctcaaggacggttatgcgcgggct
cgggaaatgctcaagcccaacccttacccagatgcgtcgccgaacctgcccaaactcgac
gccaaccgcaagtcggcgagttatctcaagcaggacgcacatttctacaaaccgcccatc
aacgtgacattcgacaagttgcccaacaacctcaaccacgtcggcgtcgagcagttgccg
tgcaacggctgtggggattgcgtctcgggctgtaacaacaaggccaagaacaccacgctg
atgaattacctgccggatgcctggaaccatggtgcggagattttctgtcaggcccaggtg
cggcacctggagcgcgacggcgacggctggatcgtgcatttccagtacctggacagcggt
cgcgagttgttctcggcgccaaccctgttcgtgcgcgccgacatcgtggtggtgtccgcc
ggcaccctgggctctaccgagatcatgctgcgttcccgggacaaaggcctgtcgatgtcc
agtcaactgggcgagaacatgagcggcaacggcgacatcctcgggtttggccacaactgc
gaccagaccatcaacggtatcggtttcggcgcccactcggccaaggagctggagccggtg
ggaccgtgcatcacctcgatcatcgacatgcgtaccgagggtgactggcgcagccgcatg
gtcatcgaggaaggctcgatccccggcgcactcggtcggcccatggtgccgagcatggcg
gcgttcgccgggatgatcggcgtgcccaccgacacgggcctgggtgccagcctcaagtac
aaggcccgggaagccgagagctttctgcgcggcccgtactatggcgcgctgcataacatg
cagacctacctgatcatgagtcacgacaacggcaaggggcgcatggtgctcgacaacaag
gaccagctgcgcatcgactggcccggcgtcggcgagcaggaaaacgtgaccctgggcaat
gagcgtttgcaccagagcaccaaggcgttgggcgggatctgggtcgagaatccgatctgg
accaagctgctcaagcacagcatcgtttcggtccatcccttgggcggctgcgtgatgggg
gaagacgcgacgcaaggcgtggtcaaccacaagggccaggtattcagtggtgccagcggg
acggatgtctatcccggtctgtacgtgacggacggtgcggtgatcccgacttccctggcg
gtgaacccgttgttgaccatctcggcggtgagcgagcgcaacatggggctgctggcggcc
gatcgtggctggatcatcgactacaccctgccttcggccccgcgcaaaccggtggcggcg
ccgacccttggcgtgcagttcactgaaaccatgaagggctacttttccacagccttcacc
cagcctcagggcactgatctttcgctttacgaagccgcggccaagcgcggcaaagccgat
aactcgcccatcgaattcaccctgaccatcactgccgccgatctcaatcgcctgatcaag
gaaccggaacacgccgccaccctggtgggtacgctggatgcgccgatgctttcgcccaag
ccgctggtcgccagcaacggagtattcaacctgttcgagcaataccaggaacaggtggat
gtgcggcacatgaactacgacatgaaactgaccgccgaggatggcagcgattattacttc
agcgccttcaagaccgtgcccgaggacaacggggtgctgaacatctggcacgacaccagc
acgctctatgtcacgctgtatcgcgggccggacaagagcggcgaggtcatcggctcgggg
gtgatgcacattctgccggccgacttcgccaagcagatgaccaccatgaaagtgctcaac
gcacgtaacgagcgtgagcgagtggaagcgttggcccgcttcggcaagttcttcgccggc
attttgtgggagagctacggcggggtgttcgctggcgatgtgtacttcaatccggacgcg
ccgcctcgcagcaagcggccgctggacgcaccggcgccgaccgtgcatttcttccagacc
gaggacaacgtcgagctacgcctgactcgctatcaagcgggcagcaaaggcccggtgatg
ctggtgcatggcctgggggtggggtcgaatattttctccaccgacaccatccagaccaac
ctgctggagtacctgtgcaagcacgagtacgacgtttggttgctggacttgcgggtgagc
atcctgctgccggccagcaagcatgaatggaacggcgaccaggtggctcagtacgacttc
aaggctgctatcgagcagatccagcaagccacgttggcccgtgacgtgcaatgtgtggtg
cattgctacggtgcgacgacgttcttcatgtcgatgctggcggggctgcaaggggttcgc
tcggtggtctgctcacagattgccgccgacacggtggttgccaccgccaccggactgaag
gccggtttgcatttgccggggatgctcgatgccatcggcatcaagtccctcacggcctac
gccgacaccaaggaaagctggttcaacaaactctacgacaaggctctcaacggttatgcc
cggatcgaggcccagggctattgcaccaacccggtctgccaccgcatcacgttcatgtat
gcatcgctgtaccgccacgacaccctcaacgaaaccctgcacgacaacctgcatgaattg
ttcggtgagtcgaacatccagaccttcgagcacctggcgctgatcgtgcgcaaggggcac
ctggtggacttcaagggcaacgacgtctacatgccgcatttcgatcggttgaaattgccg
atctgcttcatcagcggcgccgagaaccagtgctacctccctcaaagcaccctcaagacc
tacgagcgactgtgcgatatgcacggcccgcaactgttcagccgtcacgaagtgccgggc
tacggccacatcgactgcatttttggcaaggacgcggtggtggatgtgtacccgatcatc
ctcgaacacctggagaagacggcgctgggctag
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