Pseudomonas rhizophila: CRX69_24815
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Entry
CRX69_24815 CDS
T09779
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
prhz
Pseudomonas rhizophila
Pathway
prhz00730
Thiamine metabolism
prhz01100
Metabolic pathways
prhz01240
Biosynthesis of cofactors
prhz04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
prhz00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
CRX69_24815
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
CRX69_24815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
prhz03016
]
CRX69_24815
Enzymes [BR:
prhz01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
CRX69_24815
Transfer RNA biogenesis [BR:
prhz03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
CRX69_24815
BRITE hierarchy
Motif
Pfam:
ThiI
THUMP
QueC
Rhodanese
tRNA_Me_trans
ADH_N_2
Motif
Other DBs
NCBI-ProteinID:
AVU78236
LinkDB
All DBs
Position
complement(5468712..5470166)
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AA seq
484 aa
AA seq
DB search
MKLIVKVFPEITIKSRPVRMRFIRQLAKNIRAVLRDLDPAVVVNGVWDNLELETRVSEPK
ILKEMTERLSCMPGIAHFLQVDEYPLGDFDDILAKCKLHYGDALAGKIFSVRCKRAGKHP
FSSMDVERYVGSQLRKQCGAAGISLKDPQIEVRIEIRDQRLFVIHSQHDSIGGYPLGSLE
QTLVLMSGGFDSTVAAYQIMRRGLMSHFCFFNLGGRAHELGVMEVAHFIWKKYGSSQRVL
FVSVPFEEVLGEILGKVDNSHMGVILKRMMLRAASSIADRLHIDALVTGEAISQVSSQTL
PNLSVIDCVTEKLVLRPLIASHKQDIIDTANEIGTADFARHMPEYCGVISVNPKTAAKRG
RVEHEEKEFDMAVLERALENARLVPIDRVIDELGQDIQIEEVGEALAGQIIIDIRHPDDA
EDDPLSIAGIEVQTMPFYAVNARFKELDPTRQYLLYCDKGVMSRLHAHHLLSEGHANVRV
YRPS
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaaactaatcgtaaaagtcttccccgagatcaccatcaagagccgcccggtacggatg
cgtttcatccgccagttggccaagaacatccgtgccgtgctccgcgatctggacccggct
gtggtggtgaacggcgtgtgggacaacctcgaactggaaacccgcgtcagcgaacccaag
attctcaaggaaatgaccgagcgcctgagctgcatgccgggcatcgcgcatttcctgcag
gtcgacgaatacccgctgggggatttcgacgacatcctcgccaagtgcaagctgcattat
ggtgatgccctggccggcaagattttctcggtgcgctgcaagcgcgccggcaaacacccg
ttcagctcgatggacgtggagagatacgtcggcagccagttgcgcaagcagtgtggcgcc
gccggaatttcattgaaagacccgcaaattgaagtgcgcatcgaaattcgcgaccagcgg
ttgttcgtgatccacagtcagcacgacagcattggcgggtatccgctgggttcgctggaa
cagaccctggtgctgatgtccggcggtttcgattccacggtcgcggcctaccagatcatg
cggcgcgggctgatgagccatttctgcttcttcaatcttggcgggcgcgcccatgaactg
ggcgtaatggaagtggcgcacttcatctggaagaagtatggcagctcccaacgcgtgtta
tttgtgagcgtaccgttcgaggaagtcctgggcgagattctcggcaaagtcgataacagt
catatgggcgtcattttgaagcgtatgatgttgcgtgccgcatccagcatcgccgatcgg
ctgcacatcgatgcgctggtcaccggcgaggcgatctcccaggtgtcgagccagacgctg
ccgaacctgtcagtgatcgactgcgtgaccgaaaagctggtgctgcgcccgctgatcgcc
agccacaagcaggacatcatcgacacggccaacgagatcggcaccgccgattttgcccgg
cacatgccggaatactgcggggtcatctcggtcaatccgaagactgcggccaagcgcggg
cgtgtggagcatgaagagaaagaattcgacatggcggtgctcgagcgtgcgctcgaaaac
gccaggctggtgccaatcgatcgggtgatcgatgaattgggccaggacatacagattgaa
gaagtcggcgaagcgctggccggtcagatcatcatcgacatccgtcacccggacgacgct
gaagacgacccgctgagtatcgccggtatcgaggtacaaacgatgccgttctatgcagtg
aacgcgcgtttcaaggaactggaccctactcgccagtacctgttgtattgcgacaaaggc
gtgatgagtcgcctgcatgcccaccatttgctcagtgaggggcatgccaatgtgcgcgtt
tatcgaccgagctaa
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