Phodopus roborovskii (desert hamster): 127213795
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Entry
127213795 CDS
T08852
Symbol
Pold1
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03030
DNA replication
prob03410
Base excision repair
prob03420
Nucleotide excision repair
prob03430
Mismatch repair
prob03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
127213795 (Pold1)
03410 Base excision repair
127213795 (Pold1)
03420 Nucleotide excision repair
127213795 (Pold1)
03430 Mismatch repair
127213795 (Pold1)
03440 Homologous recombination
127213795 (Pold1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prob03032
]
127213795 (Pold1)
03400 DNA repair and recombination proteins [BR:
prob03400
]
127213795 (Pold1)
Enzymes [BR:
prob01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
127213795 (Pold1)
DNA replication proteins [BR:
prob03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
127213795 (Pold1)
DNA repair and recombination proteins [BR:
prob03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
127213795 (Pold1)
MMR (mismatch excision repair)
DNA polymerase delta complex
127213795 (Pold1)
BRITE hierarchy
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
127213795
NCBI-ProteinID:
XP_051030207
LinkDB
All DBs
Position
Unknown
AA seq
1102 aa
AA seq
DB search
MDFKRRQGPGPGVPSKRARGGLWDEDEPTQLENLALLEELESENRMQEAEEELQLPPEGT
VGGQFSTADIDPRWLRPTLRALDPNTEPLIFQQLEIDHYVGSAVLLPGGPPAPRNSVPIL
RAFGVTDEGFSVCCHIHGFAPYFYTPAPPGFGAEHLSDLQRELNTAISRDQRGGKELSGS
AVLAIELCSRESMFGYHGHGPAPFLRITLALPRLVAPARRLLEQGVRVPGLGTPSFAPYE
ANVDFEIRFMVDADIVGCNWLELPAGKYVWRAEKKATLCQLEVDVLWSDVISHPPEGQWQ
RIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAPILG
ATVQSYEREEDLLQAWATFILAMDPDVITGYNIQNFDLPYLISRAQTLKVDRFPFLGRVT
GLRSNIRDSSFQSRQVGRRDSKVVSMVGRVQMDMLQVLLREYKLRSYTLNAVSFHFLGEQ
KEDVQHSIITDLQNGNEQTRRRLAVYCLKDAFLPLRLLERLMVLVNNVEMARVTGVPLGY
LLSRGQQVKVVSQLLRQAMPQGLLMPVVKTEGGEDYTGATVIEPLKGYYDVPIATLDFSS
LYPSIMMAHNLCYTTLLRPGVAQKLGLKPDEFIKTPTGDEFVKSSVRKGLLPQILENLLS
ARKRAKAELATETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTGFGR
QMIEKTKQLVESKYTLENGYGANAKVVYGDTDSVMCRFGVSSVAEAMSLGREAANWVSSH
FPSPIRLEFEKVYFPYLLISKKRYAGLLFSSQPDTHDRMDCKGLEAVRRDNCPLVANLIT
SSLRRILVDRDPDGAVAHAKDVISDLLCNRIDISQLVITKELTRAAADYAGKQAHVELAE
RMRKRDPGSAPNLGDRVPYVIIGAAKGVAAYMKSEDPLFVLEHSLPIDTQYYLEQQLAKP
LLRIFEPILGEGRAESVLLRGDHTRCKTVLTSKVGGLLAFTKRRNCCIGCRSVINHQGAV
CEFCQPRESELYQKEVSHLNALEERFSRLWTQCQRCQGSLHEDVICTSRDCPIFYMRKKV
RKDLEDQERLLQRFGPPGPEAW
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atggattttaagcggcgacaaggaccaggccctggggtgccctcaaaacgggctcgtggg
ggcctctgggatgaggatgagccaacgcagcttgagaacttggcgctgctggaggagttg
gagtctgaaaatcggatgcaagaggcagaggaggagctgcagctgcccccagagggcact
gtgggtgggcagttttccactgcagacatcgacccacgctggctgcggcccaccctgcgt
gccctggaccccaacacggagcccctcatcttccagcagctagagattgaccactatgtt
ggctcagcagtgctactgccagggggtcccccagcgccccgtaactcagtgcctatactg
cgtgcctttggggtcaccgatgagggcttctccgtctgctgccatatccacggctttgca
ccctacttctacacccccgcacctcctggtttcggggccgagcacctgagtgacctgcag
cgagagctgaacacagccatcagccgggaccagcgtggtgggaaggagctgtcggggtca
gcggtgctggctatagagctgtgctcccgtgagagcatgtttgggtaccacggtcacggc
cccgctccgtttctccgcatcaccctggcgctaccccgccttgtggcaccagcccgccgc
ctcctggaacagggtgtccgtgtgcctggcttagggactccaagcttcgcgccctatgag
gccaacgtggactttgagatccggttcatggtggatgccgacatcgtgggctgtaactgg
ttggagctcccagcggggaagtatgtttggagggcagagaagaaggctacactgtgccag
ctggaggtggatgtgttgtggtcagatgtgatcagtcacccaccagaaggccaatggcaa
cgcatcgcgcccctgcgtgtcctcagcttcgacatcgagtgtgctggccggaaaggcatc
ttccccgagccagagcgcgaccctgtgatccagatctgttccctggggctgcggtggggc
gagccagagccattcttgcgcctggcactcacgctgcggccctgcgcccccatcctgggt
gccacagtgcagagctatgagcgggaagaagacctgctccaggcctgggccaccttcatc
ctcgccatggaccctgacgtgatcaccggctacaatattcaaaactttgacctcccgtac
ctcatctcccgggcacaaaccctgaaggtggaccgcttccctttcctgggccgcgtgact
ggtctccgctccaacatccgggactcctccttccagtcgaggcaggtgggccgacgggac
agtaaggtggtcagcatggtgggtcgagttcagatggacatgctgcaggtgctgctgcgg
gagtacaagctccgctcctacacgctcaatgctgtgagcttccacttcctgggtgagcag
aaggaggatgtgcaacatagcatcatcacagacctgcagaacgggaatgagcagacccgc
cgccgcctggccgtgtactgcctgaaggacgccttcctgccccttcggctgcttgagcgc
cttatggtgctggtgaacaatgtggaaatggcgcgtgtcacaggtgtgccccttgggtac
ctgctcagccgaggccaacaggtcaaggtcgtgtctcagctgctgcgccaggccatgcct
caggggctcctgatgcccgtggtgaagactgagggcggcgaggactacacaggagccact
gtcattgagccccttaaagggtactatgacgtccccattgccaccctggatttctcctct
ctgtatccatccatcatgatggcccataacctgtgctacaccacactgctgcggcccggg
gttgcccagaagttgggcctgaaaccagatgagttcatcaagacgcccactggagatgag
tttgtgaagtcatctgtgcggaagggcctcctgccccagatcctggagaatctgctgagt
gcccggaagagggccaaggctgagctggctacggagacggaccccttgcggcggcaggtc
ttggatggccggcagctggcactgaaagtgagtgccaactctgtgtatggcttcactggt
gcccaggtgggaaagctgccatgtttggagatctcccagagcgtcactgggttcgggcgt
cagatgattgagaaaaccaagcagctagtggagtccaagtacaccctggaaaatggctac
ggtgccaacgccaaggtggtctacggcgacaccgactctgtgatgtgccgatttggtgtc
tcctctgtggctgaggcaatgtctctgggtcgggaggccgcaaactgggtgtccagtcac
ttcccgtcacccatccggctggagtttgagaaggtttacttcccatacctgctcatcagc
aagaagcgctatgctggcctactcttctcctcgcagcctgacacccatgacagaatggac
tgcaagggtctggaggctgtgcgtagggacaactgtcccctggtggccaacctcatcaca
tcctctctgcgacgaatccttgtggaccgggaccctgatggtgcagtcgcccatgcaaag
gatgtcatctcagacctgctgtgcaaccgcatagacatctcccagctggtcatcaccaag
gagctgacccgtgccgcggcggactacgccggcaagcaggctcatgtggaactggctgag
aggatgaggaagcgtgaccccggcagtgcgcccaatttgggtgaccgcgtcccctatgtg
atcatcggtgctgccaaaggcgtggctgcctacatgaagtccgaggaccccctgtttgtg
ctggagcacagcctgcccatcgacactcagtactacctggagcagcagctggccaagcca
ctcctgcgcatttttgagcccattctgggtgagggccgtgcagagtctgtgctgctacga
ggtgaccacacacgctgcaaaaccgtgctcaccagcaaggttggtggcctcctggccttc
accaagcgccgcaactgttgcattggctgccgctccgtgatcaaccatcagggagctgtg
tgtgaattctgccagccacgggagtcggagctctatcagaaggaggtgtcacacctgaat
gccctggaggaacgcttctcacgcctctggacacagtgccagcgttgccagggtagcttg
catgaggatgtcatctgtaccagtcgcgactgtcccatcttctacatgcgcaaaaaagtg
cgcaaggacctggaggaccaggagcgcctgctgcagcgttttggacctccgggccccgag
gcttggtga
DBGET
integrated database retrieval system
