Phodopus roborovskii (desert hamster): 127218748
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Entry
127218748 CDS
T08852
Symbol
Cacna1h
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04010
MAPK signaling pathway
prob04020
Calcium signaling pathway
prob04713
Circadian entrainment
prob04925
Aldosterone synthesis and secretion
prob04927
Cortisol synthesis and secretion
prob04929
GnRH secretion
prob04934
Cushing syndrome
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127218748 (Cacna1h)
04020 Calcium signaling pathway
127218748 (Cacna1h)
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
127218748 (Cacna1h)
04925 Aldosterone synthesis and secretion
127218748 (Cacna1h)
04927 Cortisol synthesis and secretion
127218748 (Cacna1h)
09159 Environmental adaptation
04713 Circadian entrainment
127218748 (Cacna1h)
09160 Human Diseases
09167 Endocrine and metabolic disease
04934 Cushing syndrome
127218748 (Cacna1h)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
prob04040
]
127218748 (Cacna1h)
Ion channels [BR:
prob04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
127218748 (Cacna1h)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
127218748
NCBI-ProteinID:
XP_051035690
LinkDB
All DBs
Position
Unknown
AA seq
2318 aa
AA seq
DB search
MARVDSSYKALFLSVLGLLVTTALVQCVLAIGVQRHSEDSSSDYAGFGTARRWFEHISML
VIMLNCVTLGMFRPCEDVECRSERCSILEAFDDFIFAFFAVEMVIKMVALGLFGQKCYLG
DTWNRLDFFIVMAGMMEYSLDGHNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLP
MLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFLDSTFVRNNNLTFLRPYYQTEEGEENP
FICSSRRDNGMQKCSHIPSRRELRVQCTLGWEAYGQPQAEDGGAGRNACINWNQYYNVCR
SGEFNPHNGAINFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSF
FMINLCLVVIATQFSETKQRENQLMREQRARYLSNDSTLASFSEPGSCYEELLKYVGHIF
RKVKRRSLRLYARWQSRWRKKVDPSSTLHGQGPGRRPRRPGRRTASVHHLVYHHHHHHHH
HYHFSHTGPRKPSPEPGAGDTRLVRACVPPSPPSPGHGPPDSESVHSIYHADCHVEGPQE
RARVAHSIATAASLKLASGLGTMNYPTILPSGAINSKGGTGPRPKGLRGAGTPGAAAHSP
LSLGSPSPYEKIQHVVGEQGLGRASSHLSGLSVPCPLPSPQAGTLTCELKSCPYCASALE
DPEFEFSGSESGDSDAHGVYEFTQDVRHGDFRDPVQRPNEVGTPGHGSERRRPPRRTASE
PGGLGRLWASFSGKLRRIVDSKYFNRGIMAAILVNTLSMGVEYHEQPDELTNALEISNIV
FTSMFALEMLLKLLACGPLGYIRNPYNIFDGIVVVISVWEIVGQADGGLSVLRTFRLLRV
LKLVRFLPALRRQLVVLMRTMDNVATFCMLLMLFIFIFSILGMHLFGCKFSLKTDSGDTV
PDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSSWAALYFVALMTFGNYVLFNLLV
AILVEGFQAEGDATRSDTDEDKTSTHLEEEFDKLRDLQATEMKMYSLAVTPNGHLEGRGS
LPPPVITHTAATPMPTPKSSPHLDVAHVILDSQHSSSGSVDPQLGDQKSLASLRSSPCAP
WGPNSAGSSRRSSWNSLGRAPSLKRRSQCGERESLLSGEGKGSTDDEAEDSRPGTGSHPG
ASPGPRATPLRRAESLDHHSTLDLCPPRPAALLPTKFHDCNGQMVALPSEFFLRIDSHKE
DAAEFDDDIEDSCCFRLHKVLEPYAPQWCRSRESWALYLFPPQNRLRVSCQKVIAHKMFD
HVVLVFIFLNCITIALERPDIDPGSTERAFLSVSNYIFTAIFVVEMMVKVVALGLLWGEH
AYLQSSWNVLDGLLVLVSLVDIIVAMASAGGAKILGVLRVLRLLRTLRPLRVISRAPGLK
LVVETLISSLRPIGNIVLICCAFFIIFGILGVQLFKGKFYYCEGTDTRNITTKAECHAAH
YRWVRRKYNFDNLGQALMSLFVLSSKDGWVNIMYDGLDAVGIDQQPVQNHNPWMLLYFIS
FLLIVSFFVLNMFVGVVVENFHKCRQHQEAEEARRREEKRLRRLERRRRKAQRRPYYADY
SHTRRSIHSLCTSHYLDLFITFIICLNVITMSMEHYNQPKSLDEALKYCNYVFTVVFVFE
AALKLVAFGFRRFFKDRWNQLDLAIVLLSIMGIALEEIEMNAALPINPTIIRIMRVLRIA
RVLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGRLECSEDNPCE
GLSRHATFTNFGMAFLTLFRVSTGDNWNGIMKDTLRECAREDKHCLSYLPALSPVYFVTF
VLVAQFVLVNVVVAVLMKHLEESNKEAREDAEMDAEIELEMAQGSTAQPPSAAQESPGSQ
PDTPNLLVVRKVSVSRMLSLPNDSYMFRPVAPAVVPHPQPLQEVEMETYAGSVSSGPVTS
AHSPPLEPRASFQVPSAASSPARVSDPLHALSPRGTPRSLSLSRILCRQEAMHTESLEGQ
VDDPVEDNIPDHTEPVEKTSTRQLSLGSLRSPTCSPRPASVRTRKHTFGQRCISSRPPTL
GGDEAEAADPADEEVSHITSSAHPWPATEPHSPEASPTASPAAKGMVGSGRDPRRFCSVD
AQSFLDKPGRADSQRWHSVELDSGDSYLESGEGRGRASELEPALGARRKKKMSPPCISIE
PPTEDEGSSRPPAAEGGNTTLRRRTPSCEAALHRDCPESTEGPGTGGDPVAKGERWGQAS
CRAEHLTVPNFAFEPLDMGGPGGDSFLDSDQSVTPEPRVSSSGAIMPLAHHGTEPSVPSG
NPPEKGQGLYLTVPQTPLKKPGSPPATPALDDSGDEPV
NT seq
6957 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtgtggatagttcctacaaagctctgttcctctcagtcctgggactgctggtg
actacagccctggtacaatgtgtcctggctataggggtccagaggcacagtgaagacagc
agcagcgactatgcagggtttggaactgcccgcaggtggtttgagcacatcagcatgctg
gtcatcatgctaaactgcgtgacactaggcatgttccggccctgtgaggatgttgagtgc
cgctcagaacgttgcagcatcttggaggcctttgatgacttcatctttgccttctttgct
gtggagatggttatcaaaatggtggctttgggactgtttgggcagaagtgctacctgggt
gatacctggaacaggctggacttcttcattgtcatggcgggcatgatggagtactctctg
gatggacacaacgtgagcctctctgccatccgcacagtgcgtgtgctgcggcccctccgt
gccatcaatcgggtccctagcatgcggatcctggtcactctgctgctggacacgctgccc
atgcttgggaatgttcttctgctctgcttcttcgtcttcttcatcttcggcattgttggg
gttcagctctgggctggcctgctgaggaaccgctgcttcctggacagtaccttcgtcagg
aacaacaacctgaccttcctgcgtccatactaccaaacagaggaaggtgaggagaaccct
ttcatctgctcctcacgccgcgacaatggcatgcagaagtgctcacacatccccagccgt
cgtgagcttcgtgtgcagtgcacacttggctgggaagcctatgggcagccgcaggctgag
gacgggggtgctggccgcaatgcctgtatcaactggaaccagtactacaacgtgtgccgc
tcaggggaattcaaccctcacaatggtgccatcaactttgacaacatcggctatgcttgg
atcgccatctttcaggtcatcacactggagggctgggtggacatcatgtactacgtcatg
gacgcccactcgttctacaacttcatctacttcatcctgctcatcatcgtgggctccttc
ttcatgatcaacctgtgcttggtggtgatagccacgcagttctcagagacaaaacagagg
gagaaccagctgatgcgtgaacagcgggcccgctatctgtccaacgacagcactctggcc
agcttctcagagcccggcagctgttacgaagagctcctcaagtatgtgggccacatcttc
cgcaaggttaagcgccgtagcctgcgcctttatgcccgctggcagagccgctggcgtaag
aaggtggaccccagcagcaccctgcatggccaaggccctgggcggcggccacggcggcca
ggcaggcgcacagcttccgtgcaccacctggtctaccatcaccaccaccaccatcatcac
cattaccacttcagccacactggcccacgcaagcccagcccagagccaggtgctggtgac
accaggttggttcgggcctgtgtgcccccctcgccaccatccccaggccatgggcctcca
gactctgagtctgtgcacagtatctatcatgctgactgccatgtggaggggccacaggaa
agagcccgggtggcacactccatagcaactgctgccagtctcaagctggcctcaggtctg
ggcaccatgaactaccccaccatcctgccttcaggagcaatcaacagcaaaggtggcacc
ggcccacgacccaaggggctgcggggtgctgggaccccaggggctgcagctcacagtcct
ctgagcctgggcagccctagcccctatgagaagatccagcatgtggttggggaacaagga
ctgggccgagcctctagccacctttctggcctgagtgtgccttgccccctgcccagcccc
caggcgggcacactgacctgtgaactgaagagctgcccatattgtgccagcgccctggag
gatcctgagtttgagtttagtggttcggagagtggagactcagatgcccatggagtctat
gagtttacacaggatgtacgacatggggatttccgggaccctgtgcagcggcccaatgaa
gtgggcacaccaggtcatggcagtgagaggcggcggccacctcggcggacagcctcagag
ccaggagggctaggccgcctctgggcatctttcagtggcaagctgcgtcgaatcgtggac
agcaagtacttcaacaggggcattatggcagccatcctcgtcaacacgctgagcatgggc
gttgagtatcatgaacagcctgatgagctgaccaatgcactggagataagcaacatcgta
ttcaccagcatgttcgccctggagatgctactgaagttgctggcctgtggcccactgggc
tacatccgaaacccctacaacatctttgacggcattgttgttgtcatcagcgtctgggag
atcgtggggcaggcagatggtggcttgtctgtgcttcgcacattccggctgcttcgggtg
ctgaagctggtgcgcttcctacctgccctgcggcggcagctggtggtgctcatgaggacc
atggacaatgtggccaccttctgcatgttactcatgctcttcatcttcattttcagcatt
ctgggaatgcacctatttggctgtaagttcagcctgaagacagactctggagacacagtc
cctgacaggaagaactttgactccctgctgtgggccatcgtcactgtgttccagatcctg
acacaggaagactggaacgtggtcctctacaatggcatggcttccacctcctcctgggct
gccctgtactttgtagccctgatgaccttcgggaactacgtgctcttcaacctgctggta
gccatcctggtggaaggcttccaggcagagggtgatgccaccaggtctgacactgacgag
gataagacatctactcacttagaggaagagtttgataagctcagagatcttcaggctaca
gagatgaagatgtactcactggctgtgacccccaatgggcacctagagggccgtggcagc
ctgccacctcccgtcatcacgcacacagcggctacgcctatgcctacacccaagagctcc
ccacacctggatgtggctcatgttatcctggactcgcagcacagcagcagtggctctgtg
gacccccagctgggggaccagaagtctctggccagtctccgcagctccccgtgtgctcca
tggggccccaacagcgctgggagcagccggcgctccagctggaacagcctgggccgtgca
cccagcctcaaacgccgcagtcagtgtggggagcgtgagtcactgctctctggtgaggga
aagggcagcacagatgatgaggctgaggatagcaggccaggcacaggaagccacccagga
gcatcgcctgggccccgtgccactccactgcggagggccgagtcattggaccaccacagc
actctggacctgtgtcccccacggcctgctgccctcctacccaccaagttccatgactgc
aatgggcagatggtggccctgcccagcgagttcttcctgcgcatcgacagccacaaggaa
gatgcagccgagtttgatgatgatatagaggatagctgctgcttccgcctgcacaaagta
ctggaaccctatgcaccccagtggtgccgcagccgggagtcctgggccctgtacctcttc
ccaccgcagaacaggctacgagtctcctgccagaaagtcatcgcacacaagatgtttgac
catgtggtcctcgtcttcatcttcctcaactgcatcaccattgccctggagaggccagac
attgacccaggcagcaccgagagggccttcctcagcgtctccaactacatcttcacagcc
atcttcgtggtagagatgatggtgaaggtggtagccctgggcctgctgtggggtgagcat
gcctacctgcagagcagctggaatgtgctggatgggcttcttgtcctggtgtccctggtt
gacatcatcgtggccatggcctcagctggcggtgccaagatcctgggcgtcctgcgtgtg
ttgcgcctgcttcggaccctgcggcctctgagggtcatcagccgagctccgggcctcaag
ctggttgtagagactctgatatcatcgctcaggcccattgggaacatcgtcctcatctgc
tgcgccttcttcattatctttggcatcctcggggtgcagcttttcaagggcaaattctac
tactgcgagggcacagataccaggaatatcaccaccaaggctgagtgccatgccgcccac
taccgctgggtgaggcgcaagtacaactttgacaacctgggccaggcactgatgtccctg
tttgtgctgtcatccaaggatggctgggtgaacatcatgtatgatgggcttgatgccgtg
ggcattgaccagcagcccgtgcagaaccataacccctggatgttgctgtacttcatctcc
ttcctgctcatcgtcagcttcttcgtgcttaacatgtttgtgggtgtggtggtggagaac
ttccacaaatgtcggcagcaccaggaggctgaggaggcacggcggcgtgaggagaaacgg
ctgcggcgcctggaaaggaggcgcaggaaggcccagcgccggccctactacgcagactat
tcacatacacgccgctccatccattcgctgtgcaccagccactacctggacctcttcatc
accttcatcatctgcctcaatgtcatcaccatgtccatggagcactacaaccagcccaag
tccctggatgaggccctcaagtactgcaactacgtctttaccgttgtcttcgtctttgag
gctgcactgaagctggtagcgtttgggttccggaggttcttcaaggacaggtggaaccag
ctggacttggccatagtcctcctgtccatcatgggcattgcgctggaggaaattgaaatg
aatgctgccctgcccatcaaccccaccatcatccgcatcatgcgcgtgcttcgcatcgct
cgtgtgctgaagctactgaagatggccacaggcatgcgtgctctgctggatactgtggtt
caagctctgcctcaggtagggaaccttggtcttcttttcatgctcctgttttttatctat
gctgccctgggagtggagctgtttgggaggctagaatgcagtgaggacaatccctgtgag
ggcctgagcaggcacgctaccttcaccaactttggcatggccttcctcacactgttccga
gtgtccaccggggacaactggaatgggatcatgaaggacactctacgtgaatgtgcccgt
gaggacaaacactgcctcagctacctgcccgcactgtctcccgtctacttcgtcaccttc
gtgctggttgcccagtttgtgctggtcaatgtggtggtggctgtgctcatgaaacacctg
gaggagagcaacaaggaggcccgtgaggacgccgagatggatgccgagattgagctggag
atggctcaggggtccacagcccagcccccatctgcagcacaggaaagcccaggttcccag
ccagacactccaaacctcttggtcgtgcgcaaagtgtctgtgtccaggatgctctcgctg
cccaatgacagctacatgttccggcccgtggctcccgctgtcgtcccacaccctcaacca
ctgcaggaagtggagatggagacctacgctggtagcgtctcttcgggcccggtcacctct
gctcactcgccgcccctggagccccgtgcctccttccaggtcccatcagctgcatcctcc
ccagccagggtcagcgacccgcttcatgccctttcaccccggggtacaccccgctctctg
agcctttcacggatactctgcagacaggaggccatgcacaccgaatccctggaaggtcag
gttgatgaccctgtagaagacaacatcccagaccacacagagcctgttgaaaagacctcc
accagacagttgtctctgggctccctacggtcccctacttgctccccacgacctgccagt
gtccgtactcgcaagcacacttttgggcagcgctgcatctctagccgccctcccaccctg
ggaggagatgaggctgaagcggcggacccagctgacgaggaggtcagtcacatcaccagc
tcagcccacccctggccggctacagagccccacagcccagaggcctccccaacagcctcc
cctgctgccaaaggtatggtgggtagtgggcgggacccacgcaggttctgcagtgtagat
gctcagagcttcctggacaaaccgggtcgggcagattcacaacggtggcactctgtggaa
ctggatagtggagacagctacctagagtccggggaggggaggggtcgggcctcagagctg
gagccagctcttggagcacgaaggaagaagaagatgagccctccctgcatctccattgaa
cctcccactgaggatgagggctcctcccggccccctgcagccgaaggtggcaatactacc
ctgaggcgccgaaccccatcgtgtgaggctgccctacacagggactgcccagagtccaca
gagggcccaggcactggaggggaccctgtagcgaagggtgagcgctggggccaggcctcc
tgccgagcagagcacctgactgtccccaactttgccttcgagcctctggacatgggggga
cctggtggagactctttcttggacagtgaccaaagtgtgaccccagaacccagagtttcc
tcttcgggggctataatgcctcttgcacaccatggaactgaaccttctgtgccctctggt
aaccccccagagaagggacaaggactgtacctcactgtgccccagacccccttgaagaaa
ccagggtctcccccagccacccctgccctagatgacagtggagatgagcctgtgtag
DBGET
integrated database retrieval system
