Phodopus roborovskii (desert hamster): 127222586
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Entry
127222586 CDS
T08852
Symbol
Grin1
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04014
Ras signaling pathway
prob04015
Rap1 signaling pathway
prob04020
Calcium signaling pathway
prob04024
cAMP signaling pathway
prob04080
Neuroactive ligand-receptor interaction
prob04713
Circadian entrainment
prob04720
Long-term potentiation
prob04724
Glutamatergic synapse
prob05010
Alzheimer disease
prob05014
Amyotrophic lateral sclerosis
prob05016
Huntington disease
prob05017
Spinocerebellar ataxia
prob05020
Prion disease
prob05022
Pathways of neurodegeneration - multiple diseases
prob05030
Cocaine addiction
prob05031
Amphetamine addiction
prob05033
Nicotine addiction
prob05034
Alcoholism
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
127222586 (Grin1)
04015 Rap1 signaling pathway
127222586 (Grin1)
04020 Calcium signaling pathway
127222586 (Grin1)
04024 cAMP signaling pathway
127222586 (Grin1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
127222586 (Grin1)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
127222586 (Grin1)
04720 Long-term potentiation
127222586 (Grin1)
09159 Environmental adaptation
04713 Circadian entrainment
127222586 (Grin1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
127222586 (Grin1)
05014 Amyotrophic lateral sclerosis
127222586 (Grin1)
05016 Huntington disease
127222586 (Grin1)
05017 Spinocerebellar ataxia
127222586 (Grin1)
05020 Prion disease
127222586 (Grin1)
05022 Pathways of neurodegeneration - multiple diseases
127222586 (Grin1)
09165 Substance dependence
05030 Cocaine addiction
127222586 (Grin1)
05031 Amphetamine addiction
127222586 (Grin1)
05033 Nicotine addiction
127222586 (Grin1)
05034 Alcoholism
127222586 (Grin1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
prob04040
]
127222586 (Grin1)
Ion channels [BR:
prob04040
]
Ligand-gated channels
Glutamate (ionotropic)
127222586 (Grin1)
BRITE hierarchy
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
DUF6724
Motif
Other DBs
NCBI-GeneID:
127222586
NCBI-ProteinID:
XP_051040767
LinkDB
All DBs
Position
Unknown
AA seq
959 aa
AA seq
DB search
MSTMHLLTFALLFSCSFARAACDPKIVNIGAVLSTRKHEQMFREAVNQANKRHGSWKIQL
NATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPPTPNDHFTPTPVSYTAGFYRIPVLG
LTTRMSIYSDKSIHLSFLRTVPPYSHQSSVWFEMMRVYNWNHIILLVSDDHEGRAAQKRL
ETLLEERESKSKKRNYENLDQLSYDNKRGPKAEKVLQFDPGTKNVTALLMEARELEARVI
ILSASEDDAATVYRAAAMLNMTGSGYVWLVGEREISGNALRYAPDGIIGLQLINGKNESA
HISDAVGVVAQAVHELLEKENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYADGVTGRVE
FNEDGDRKFANYSIMNLQNRKLVQVGIYNGTHVIPNDRKIIWPGGETEKPRGYQMSTRLK
IVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVICTGPNDTSPGSPRHTVPQCCYGFC
IDLLIKLARTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTI
NNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYL
LDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGF
AMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVEL
STMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFG
IGMRKDSPWKQNVSLSILKSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFML
VAGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKSGRAEPDPKKKAT
FRAITSTLASSFKRRRSSKDTSTGGGRGALQNQKDTVLPRRAIEREEGQLQLCSRHRES
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccatgcacctgctgacattcgccctgcttttttcctgctccttcgcccgtgcc
gcctgcgaccccaagatcgtcaacatcggcgcggtgctgagcacgcgcaagcacgagcag
atgttccgcgaggccgtgaaccaggccaataagcgacacggctcttggaagatacagctc
aatgccacctctgtcacccacaagcccaacgccatacagatggccctgtcagtgtgtgag
gacctcatctccagccaggtctacgctatcctagttagtcacccacctactcccaacgac
cacttcactcccaccccagtctcctacacagctggcttctacagaatccccgttctggga
ctgactacccgaatgtccatctactctgacaagagcatccatctgagctttctacgcacc
gtgccgccctactcccaccagtccagtgtctggtttgaaatgatgcgcgtctacaactgg
aaccatatcatcctgctggtcagcgacgaccacgagggccgggcggcgcagaagcgcctg
gagacactgctggaggagcgtgagtccaagagtaaaaaaaggaactatgaaaacctcgac
caactgtcctatgacaacaagcgcggacccaaggcggagaaggtgctgcagtttgacccg
ggaaccaagaatgtgacggctctgctgatggaggcacgggaactggaggccagggtcatc
attctttctgctagcgaggacgacgctgccaccgtgtaccgcgcagccgcgatgctgaac
atgacgggttctgggtacgtgtggctggtgggggagcgcgagatctcggggaacgccctg
cgttacgccccagacggcatcatcggactgcagctcatcaatggcaagaacgagtcggcc
cacatcagcgacgccgtgggtgtggtagcacaggcagttcacgagctgctagaaaaagag
aacatcaccgacccgccgcggggttgcgtgggcaacaccaacatctggaagacaggaccg
ctattcaagagggtactgatgtcttccaagtatgcggacggagtgactggccgtgtggaa
ttcaatgaggatggggaccggaagtttgccaactatagcatcatgaacctgcagaaccga
aagctggtgcaagtgggcatctacaacggcacccatgtcatcccaaatgacaggaagatc
atctggccagggggagagacagaaaagcctcgagggtaccagatgtccacgagattaaag
atagtgacaatccaccaagagccctttgtgtatgtcaagcccacactgagtgatgggaca
tgcaaagaggaattcacagtcaatggtgacccagtcaagaaagtaatctgcacagggcct
aatgacacatcaccaggcagcccacgacacacggtgcctcagtgctgctatggcttctgc
attgacctgctcatcaagttggcacggaccatgaactttacctatgaggtgcacctggtg
gcagatggcaagtttggcacacaggaacgggtaaacaacagcaacaaaaaggagtggaat
gggatgatgggagagctgctcagtggtcaagcagacatgattgtggcaccactgaccatc
aacaatgagcgtgcacagtacatagagttctccaagcccttcaagtaccagggcctgacc
attctggtcaagaaggagatcccccggagcacactggattcatttatgcagcccttccag
agcacactatggttgctagtggggctgtcagtgcacgtggtggccgtgatgttgtatctg
ctggaccgcttcagtccatttggccggttcaaggtgaacagtgaggaagaggaggaggat
gcactgaccctgtcttctgccatgtggttctcctggggtgtcctgctcaactctggcatt
ggggaaggtgccccccggagcttctctgcacggatcctaggcatggtgtgggctggcttt
gccatgatcattgtggcttcctatactgccaacctggcagccttcctggtgttggatcgg
cctgaggagcgtatcacaggcatcaatgacccaaggctcagaaacccctcagacaagttc
atctatgcaactgtgaagcagagctctgtggacatctacttccggaggcaggtggagctg
agcaccatgtaccggcacatggaaaagcacaactatgagagcgcagctgaggccatccag
gctgtgcgggacaacaagctccatgccttcatctgggactcagcagtgctggagttcgag
gcttcacagaaatgcgacctggtgaccacgggcgagctgttcttccgctcaggctttggc
attggcatgcgcaaggacagcccctggaagcagaatgtttccctgtccatactcaagtcc
cacgaaaatggcttcatggaagatctggataagacatgggttcggtatcaggaatgtgac
tcccgcagcaacgcccctgcaactctcacttttgagaacatggcaggggtcttcatgctg
gtggctggaggcattgtggctggcatcttcctgattttcatcgagatcgcctacaagcga
cacaaggatgcccgtaggaagcagatgcagctggcttttgcagcagtgaacgtgtggagg
aagaacctgcaggatagaaagagtggtagagcagagcccgaccctaaaaagaaagccaca
tttagggctatcacctccaccctggcctccagcttcaagagacgtaggtcctccaaagac
acgagcaccgggggtggacgcggcgctttgcaaaaccaaaaagacacagtgctgccgcga
cgcgctattgagagggaggagggccagctgcagctgtgttcccgtcatagggagagctga
DBGET
integrated database retrieval system
