Phodopus roborovskii (desert hamster): 127222633
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Entry
127222633 CDS
T08852
Symbol
Notch1
Name
(RefSeq) neurogenic locus notch homolog protein 1
KO
K02599
Notch 1
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob01522
Endocrine resistance
prob04330
Notch signaling pathway
prob04658
Th1 and Th2 cell differentiation
prob04919
Thyroid hormone signaling pathway
prob05020
Prion disease
prob05165
Human papillomavirus infection
prob05200
Pathways in cancer
prob05206
MicroRNAs in cancer
prob05224
Breast cancer
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
127222633 (Notch1)
09150 Organismal Systems
09151 Immune system
04658 Th1 and Th2 cell differentiation
127222633 (Notch1)
09152 Endocrine system
04919 Thyroid hormone signaling pathway
127222633 (Notch1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
127222633 (Notch1)
05206 MicroRNAs in cancer
127222633 (Notch1)
09162 Cancer: specific types
05224 Breast cancer
127222633 (Notch1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
127222633 (Notch1)
09164 Neurodegenerative disease
05020 Prion disease
127222633 (Notch1)
09176 Drug resistance: antineoplastic
01522 Endocrine resistance
127222633 (Notch1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
EGF_CA
EGF_2
Ank_2
Ank
NOD
Notch
NODP
Ank_4
Ank_5
Ank_3
EGF_3
JAG1-like_EGF2
DL-JAG_EGF-like
Motif
Other DBs
NCBI-GeneID:
127222633
NCBI-ProteinID:
XP_051040862
LinkDB
All DBs
Position
Unknown
AA seq
2531 aa
AA seq
DB search
MPRLLAPLLCLTLLPALAARGLRCSQPSGTCLNGGRCEVANGTEACVCSGPFVGQRCQDP
NPCLSTPCKNAGTCHVVDHGGTVNYACSCPLGYSGPLCLTPLDNACLANPCRNGGTCDLL
TLTEYKCRCPPGWSGKSCQQADPCASNPCANGGQCLPFESSYICGCPPGFHGPTCRQDVN
ECSQNPGLCRHGGTCHNEIGSYRCACRATHTGPHCELPYVPCSPSPCQNGGTCRPTGDTT
HECACLPGFAGQNCEENVDDCPGNNCKNGGACVDGVNTYNCRCPPEWTGQYCTEDVDECQ
LMPNACQNGGTCHNTHGGYNCVCVNGWTGEDCSENIDDCASAACFQGATCHDRVASFYCE
CPHGRTGLLCHLNDACISNPCNEGSNCDTNPVNGKAICTCPSGYTGPACSQDVDECALGA
NPCEHAGKCLNTLGSFECQCLQGYTGPRCEIDVNECISNPCQNDATCLDQIGEFQCICMP
GYEGVYCEVNTDECASSPCLHNGHCMDKINEFLCQCPKGFSGHLCQYDVDECASTPCKNG
AKCLDGPNTYTCVCTEGYTGTHCEVDIDECDPDPCHYGSCKDGVATFTCLCQPGYTGHHC
ETNINECHSQPCRHGGTCQDRDNSYLCLCLKGTTGPNCEINLDDCASNPCDSGTCLDKID
GYECACEPGYTGSMCNVNIDECAGSPCHNGGTCEDGIAGFTCRCPEGYHDPTCLSEVNEC
NSNPCIHGACRDALNGYKCDCAPGWSGTNCDINNNECESNPCVNGGTCKDMTGGYVCTCR
EGFSGPNCQTNINECASNPCLNQGTCIDDVAGYKCNCPLPYTGATCEVVLAPCATSPCKN
SGVCKESEDYESFSCVCPTGWQGQTCEIDINECVKSPCRHGASCQNTNGSYRCLCQAGYT
GRNCESDIDDCRPNPCHNGGSCTDGINTAFCDCLPGFQGAFCEEDINECASNPCRNGANC
TDCVDSYTCTCPAGFNGIHCENNTPDCTESSCFNGGTCVDGINSFTCLCPPGFTGSYCQY
DVNECDSRPCLHGGTCQDSYGTYKCTCPQGYTGLNCQNLVRWCDSAPCKNGGKCWQTNTQ
YHCECRSGWTGFNCDVLSVSCEVAAQKRGIDVTLLCQHGGLCVDEEDKHYCHCQAGYTGS
YCEDEVDECSPNPCQNGATCTDYLGGFSCKCVAGYHGSNCSEEINECLSQPCQNGGTCID
LTNTYKCSCPRGTQGVHCEINVDDCHPHLDPASRSPKCFNNGTCVDQVGGYSCTCPPGFV
GERCEGDVNECLSNPCDPRGTQDCVQRVNDFHCECRAGHTGRRCESVINGCRGKPCKNGG
VCAVASNTARGFICRCPAGFEGATCENDARTCGSLRCLNGGTCISGPRNPTCLCLGSFTG
PECQFPASSPCVGSNPCYNQGTCEPTSESPFYRCLCPAKFNGLLCHILDYSFTGGAGRDI
PPPQIEEACELPECQEDAGNKVCNLQCNNHACGWDGGDCSLNFNDPWKNCTQSLQCWKYF
SDGHCDSQCNSAGCLFDGFDCQRTEGQCNPLYDQYCKDHFSDGHCDQGCNSAECEWDGLD
CAEHVPERLAAGTLVLVVLLPPEQLRNNSFHFLRELSHVLHTNVVFKRDAQGQQMIFPYY
GREEELRKHPIKRSAVGWTTSSLLPSTSGGRQRRELDPMDIRGSIVYLEIDNRQCVQSSS
QCFQSATDVAAFLGALASLGNLNIPYKIEAVKSETVEPPLPPQLHLMYVAAAAFVLLFFV
GCGVLLSRKRRRQHGQLWFPEGFKVSEASKKKRREPLGEDSVGLKPLKNASDGALMDDNQ
NEWGDEDLETKKFRFEEPVVVPDLDDQTDHRQWTQQHLDAADLRMSAMAPTPPQGEVDAD
CMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGET
ALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILLRNRATDLDA
RMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKN
GANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIV
RLLDEYNLVRSPQLHGTALGGTPTLSPTLCSPNGYLGNLKSATQGKKARKPSTKGLACGS
KEAKDLKARRKKSQDGKGCLLDSSSMLSPVDSLESPHGYLSDVASPPLLPSPFQQSPSMP
LSHLPGMPDTHLGISHLNVAAKPEMAALAGSSRLAFEPPPPRLSHLPVASNASTVLSTNG
TGAMNFTVGTPASLNGQCEWLPRLQNGMVPSQYNPLRPGVASGTLSTQAAGLQHGMMGPL
HSSLSTNTLSPMIYQGLPNTRLATQPHLVQTQQVQPQNLQIQPQNLQPPSQPHLSVSSAA
NGHLGRSFLGGEHSQADVQPLGPSSLPVHTILPQESQALPTSLPSSMVPPMTTTQFLTPP
SQHSYSSSPVDNTPSHQLQVPEHPFLTPSPESPDQWSSSSPHSNISDWSEGISSPPTSMP
SQITHIPEAFK
NT seq
7596 nt
NT seq
+upstream
nt +downstream
nt
atgccgcggcttctggcgcccttgctctgcctaacgctgctgcctgcgctcgccgcaaga
ggcttgagatgctcccagccaagtgggacctgcctgaatggagggaggtgtgaagtggcc
aacggcactgaagcctgcgtctgcagtgggcccttcgtgggccaacgatgccaggacccc
aatccatgcctgagcacaccctgcaagaatgctggaacatgccatgttgtggaccatggt
ggcactgtgaattatgcctgtagctgtcccctgggttactctgggcccctctgcctgaca
cctctggacaatgcctgcctagctaacccctgccgcaatgggggtacctgtgacctgctc
actctcacagaatacaagtgccgttgtcccccaggatggtcaggaaagtcatgtcagcaa
gctgacccgtgtgcctccaacccctgtgccaatggtggccagtgcctgccctttgagtct
tcgtacatctgtggctgcccacctggtttccatggccccacctgcaggcaagatgttaac
gagtgcagccagaaccctgggctgtgccgccacggaggcacctgccacaatgagatcggc
tcctatcgctgcgcctgccgcgccacccatactggtccccactgtgaactaccctacgtg
ccttgcagcccctcaccctgccagaatgggggcacctgccgccctacgggggacaccacc
catgagtgcgcctgtctgccaggctttgctggccagaactgtgaagaaaatgtggatgac
tgtccaggaaacaactgtaagaatgggggtgcctgtgtggatggtgtgaatacctataat
tgccgctgcccaccagaatggacaggtcagtactgcacagaagatgtggatgagtgtcag
ctcatgcccaacgcttgccagaatggtggaacctgccacaatacccatggtggctacaac
tgcgtgtgtgtcaacggctggactggcgaggactgcagtgagaatattgatgactgtgcc
agtgctgcctgtttccagggtgccacctgccatgatcgtgtggcctccttctactgcgag
tgtccacatgggcgcacaggtctgctgtgccacctcaacgatgcatgcatcagcaacccc
tgcaatgagggctccaactgcgacaccaatcctgtcaatggcaaggccatctgcacttgc
ccctcaggatacacgggaccagcctgcagccaggatgtggatgaatgtgctctgggtgcc
aacccctgtgagcatgcgggcaagtgcctaaacaccttgggttcctttgagtgccagtgt
ctacagggctacacggggccccgctgtgagattgatgtcaatgagtgcatctccaaccca
tgtcagaatgatgccacctgcctggaccaaattggggagttccagtgtatatgtatgcca
gggtatgagggtgtgtactgtgaggtcaacacagacgagtgcgccagcagcccctgcctg
cacaatggccactgtatggacaagatcaacgagttcctgtgtcagtgtcccaaaggcttc
agcgggcacctgtgccagtatgatgtggatgagtgtgcaagcacaccttgcaagaatggt
gccaagtgtctggatgggcccaacacctacacctgcgtgtgcacagaaggttacacagga
acacactgcgaggtggacattgatgaatgtgaccctgacccatgtcactatggttcctgc
aaggatggtgtggccacatttacctgcctctgccagccaggctacacaggccaccactgc
gagaccaacattaatgagtgccacagccagccgtgccgtcacgggggcacttgccaggac
cgtgacaactcctacctctgcttatgcctcaagggaaccacaggacccaactgtgagatc
aacttggatgactgtgccagcaacccctgcgactcaggcacatgcctagacaagattgat
ggctacgagtgtgcctgtgagccaggttacacagggagcatgtgcaacgtcaacattgat
gagtgtgcaggcagcccctgccacaatgggggtacctgtgaggatggcatcgctggcttc
acctgccgctgccccgagggctaccatgaccccacatgcctgtctgaggtcaacgagtgc
aacagtaacccctgcatccatggggcttgccgggatgctctcaatgggtacaagtgtgac
tgtgcccctggatggagtggaacaaactgtgacatcaacaacaatgagtgtgagtcaaac
ccttgtgtcaatggcggcacctgcaaagacatgaccggtggctacgtgtgcacctgccga
gaaggcttcagtggtcctaactgccagaccaacatcaatgagtgtgcctccaacccctgc
ctgaaccaggggacctgtattgatgatgttgctgggtacaagtgcaactgtcctctgccc
tatacaggagcaacgtgtgaggtggtgttggcaccatgtgccaccagcccctgcaaaaac
agtggggtgtgcaaggagtctgaagactacgagagcttttcctgtgtgtgtcccacaggc
tggcagggtcaaacctgtgagattgacatcaatgagtgtgtgaagagtccatgtcgccat
ggtgcctcctgccagaacaccaatggcagctaccgctgcctctgccaggctggctacaca
ggtcgcaactgtgagagtgacatcgatgactgccgaccgaacccatgtcacaatgggggt
tcctgcactgatggtatcaacacggccttctgcgactgcctgcccggctttcagggtgcc
ttctgtgaggaggacatcaacgaatgtgccagtaatccctgccgaaacggtgccaactgc
accgattgtgtggacagctacacatgcacctgccctgcaggtttcaatggcatccactgt
gagaataacacacctgactgtaccgaaagctcctgcttcaatggtggcacctgtgtggat
ggtatcaactccttcacctgtctgtgtccacctggcttcacgggcagctactgccagtat
gatgtcaatgagtgtgactcacgaccctgtctgcatggtggcacctgtcaagacagctat
ggcacctataagtgcacctgcccacagggttacactggcctcaactgccagaaccttgtg
cgctggtgcgactcagctccctgcaagaatggtggcaagtgctggcagaccaacacacag
taccactgcgaatgccgtagtggctggactggtttcaattgtgatgtgctcagtgtgtcc
tgcgaggtagctgcacagaaacgaggcatcgacgtcaccctcctgtgccagcatggaggc
ctctgtgtggatgaggaagacaagcattactgccactgccaggcaggctacacgggcagc
tactgtgaggatgaggtggatgagtgctcacctaacccatgccagaatggagccacctgc
actgactacctgggtggcttttcctgcaagtgtgtggctggctatcacggatctaactgt
tctgaagagatcaatgagtgcctctcccagccctgtcaaaatgggggtacctgcattgat
ctgaccaacacttacaagtgctcctgccccaggggcacacagggtgtacactgtgagatc
aatgtcgatgactgccatccccaccttgaccctgcctcccgaagccccaagtgcttcaac
aatggcacctgtgtggaccaggtgggtggctacagctgcacctgcccaccaggcttcgtc
ggggaacgttgtgagggcgatgtcaatgagtgtctctccaacccctgtgacccacgtggc
acccaggactgcgtgcagcgtgttaatgacttccactgcgagtgccgggctggccacact
ggacgccgctgcgagtcagtcatcaatggctgccggggcaaaccatgcaagaatgggggt
gtctgtgccgtggcctccaacactgcccgcggattcatctgcaggtgccctgcgggcttt
gagggcgccacctgtgagaatgatgcccgcacttgtggcagcttacgctgcctgaatggt
ggtacatgtatctcaggcccacgcaatcccacctgcctgtgcctgggctccttcactggc
cccgagtgccagttcccagccagcagcccctgtgtgggtagcaacccttgctacaatcag
ggcacctgtgagcccacatccgagagccctttctaccgatgtctgtgccctgccaaattc
aacgggctgctgtgccacatcctggactacagcttcacaggtggtgctgggcgcgacatt
cccccaccacagattgaggaggcctgcgagctgcccgagtgccaggaggatgcaggcaac
aaggtctgcaacctgcagtgcaataatcatgcttgtggctgggatggtggtgactgctcc
ctcaacttcaatgacccttggaagaactgcacgcagtccctgcagtgctggaagtatttc
agtgatggccattgtgacagccagtgcaactcagccggctgcctctttgatggcttcgac
tgccagcgcaccgaggggcagtgcaaccctctctatgaccagtattgcaaggaccacttc
agtgatggccattgcgaccagggctgcaacagcgctgagtgcgagtgggatgggctagac
tgtgcagagcatgtgcccgaacggctggcagccggcacgttggtgttggtggtgctgctc
ccacctgagcagctacgcaacaactccttccacttcctgcgggagctcagccacgtgctg
cacaccaacgtggtcttcaagcgtgatgcgcaaggccagcagatgatcttcccctactac
ggccgtgaggaagagctgcgcaagcaccccatcaagcgctctgcagtggggtggaccacc
tcttcactgcttcccagcaccagtggggggcgccagcgcagggagctggaccccatggac
atcagaggctccattgtctacctggagattgacaaccggcaatgtgtacagtcatcctca
cagtgtttccagagtgccaccgatgtggccgccttcctgggcgcgcttgcttccctcggc
aacctcaatatcccctacaagatcgaggccgtaaagagtgagacggtggagcctccgctg
cccccgcagctgcacctcatgtacgtggcagctgctgccttcgtgcttctgttctttgtg
ggctgtggggtgctgctgtcccgcaagcgccggcggcagcatggccagctgtggttccct
gagggtttcaaagtgtcagaggccagcaagaagaagcggagagagcccctcggcgaggac
tctgtcggcctcaagcccctgaagaatgcctcagatggtgccctgatggatgacaatcag
aacgagtggggggacgaagacctggagaccaagaagttccggtttgaggagccagtggtt
gttcctgacctggatgatcagactgaccatcggcagtggacccagcagcacctggatgct
gctgacctgcgaatgtctgccatggccccaacaccacctcagggtgaggtggatgctgac
tgcatggatgtcaatgtccgaggacctgatggcttcacaccactcatgatcgcctcctgc
agtggagggggccttgagacaggcaatagtgaagaagaagaagatgcgcctgctgtcatc
tcggacttcatctaccagggtgccagcttgcacaaccagacagaccgcacaggggagact
gccctgcacctggctgccagatactctcgttcagatgctgccaagcgcttgctagaggcc
agtgcagatgccaacatccaggacaacatggggcgcaccccattgcatgcagctgtttct
gcagatgctcagggtgtctttcagatcctgctccggaaccgagccacagatctggatgcc
cgcatgcatgatggcacaaccccactgatcctggctgcacgcctggccgtggagggcatg
ctagaagacctcattaactcccatgcagacgtcaatgctgtggatgacctaggcaagtca
gccttgcactgggcagcagccgtgaacaatgtggatgctgcagttgtgctcctgaagaac
ggagccaacaaagacatgcagaacaacaaggaggagactcccctgttcctggctgcccgt
gagggcagctacgaaactgccaaagtgctgctggaccactttgccaaccgggacatcaca
gatcacatggaccgactgccacgggacattgctcaggagcgcatgcatcatgatatcgtg
cggctgctggacgagtacaacctggtgcgcagcccacagctgcacggcactgccctgggt
ggcacacccaccctatctcccacactctgctcgcccaatggctacctgggcaacctcaag
tctgccacacaaggcaaaaaggcccgcaagcccagcaccaaagggctagcctgtggcagc
aaggaagctaaggacctcaaagcacggaggaagaagtcccaggatggcaagggctgcctg
ttggacagctcaagcatgctgtcacctgtggactcccttgagtcacctcatggctacttg
tcagatgtggcctcaccacccctcctcccctccccattccagcagtctccatccatgcct
ctcagccaccttcctggtatgcctgacacccacctgggcatcagccacttgaatgtggcc
gccaagcctgagatggcagcactggctggaagcagccggctggcctttgagccgcctccc
ccacgcctctcccacctgcctgtagcctccaatgccagcacagtgctgagtaccaatggc
acaggggctatgaatttcaccgtgggcacacctgcaagcttgaatggccagtgtgagtgg
ctccccaggttgcagaacggcatggtgcccagccaatacaacccactacggccaggtgtg
gcatcgggcacactgagcacacaggcggctggcctccagcatggcatgatgggcccacta
cacagcagcctctccaccaataccttgtccccaatgatctaccagggcttgcccaacaca
cggctggccacacagccccatctggtgcagacccagcaggtgcagccacagaacttacaa
atccagcctcagaacctgcagccaccatcacagccacacctcagtgtgagctcagcagcc
aatgggcacctgggccggagcttcctgggtggggagcacagccaggcggatgtacaacca
ctgggtcccagcagtctgcctgtgcacaccattctgccccaggagagccaggccctgccg
acatcactgccatcttcgatggtcccgcccatgaccactacccaattcctgacccctcct
tctcagcacagttactcctcctcacctgtggacaacacccccagccaccagctgcaggtg
ccagagcaccccttcctcaccccatcccctgaatcccccgaccaatggtccagctcctcc
ccgcattccaacatctctgattggtccgagggcatctccagcccgcccaccagcatgccg
tcccagatcacccacattccagaggcatttaagtaa
DBGET
integrated database retrieval system