KEGG   Phodopus roborovskii (desert hamster): 127222971
Entry
127222971         CDS       T08852                                 
Symbol
Nfkb1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit isoform X1
  KO
K02580  nuclear factor NF-kappa-B p105 subunit
Organism
prob  Phodopus roborovskii (desert hamster)
Pathway
prob01523  Antifolate resistance
prob04010  MAPK signaling pathway
prob04014  Ras signaling pathway
prob04024  cAMP signaling pathway
prob04062  Chemokine signaling pathway
prob04064  NF-kappa B signaling pathway
prob04066  HIF-1 signaling pathway
prob04071  Sphingolipid signaling pathway
prob04151  PI3K-Akt signaling pathway
prob04210  Apoptosis
prob04211  Longevity regulating pathway
prob04218  Cellular senescence
prob04380  Osteoclast differentiation
prob04613  Neutrophil extracellular trap formation
prob04620  Toll-like receptor signaling pathway
prob04621  NOD-like receptor signaling pathway
prob04622  RIG-I-like receptor signaling pathway
prob04623  Cytosolic DNA-sensing pathway
prob04625  C-type lectin receptor signaling pathway
prob04657  IL-17 signaling pathway
prob04658  Th1 and Th2 cell differentiation
prob04659  Th17 cell differentiation
prob04660  T cell receptor signaling pathway
prob04662  B cell receptor signaling pathway
prob04668  TNF signaling pathway
prob04722  Neurotrophin signaling pathway
prob04917  Prolactin signaling pathway
prob04920  Adipocytokine signaling pathway
prob04926  Relaxin signaling pathway
prob04931  Insulin resistance
prob04932  Non-alcoholic fatty liver disease
prob04933  AGE-RAGE signaling pathway in diabetic complications
prob04936  Alcoholic liver disease
prob05010  Alzheimer disease
prob05022  Pathways of neurodegeneration - multiple diseases
prob05030  Cocaine addiction
prob05132  Salmonella infection
prob05133  Pertussis
prob05134  Legionellosis
prob05135  Yersinia infection
prob05140  Leishmaniasis
prob05142  Chagas disease
prob05145  Toxoplasmosis
prob05146  Amoebiasis
prob05152  Tuberculosis
prob05160  Hepatitis C
prob05161  Hepatitis B
prob05162  Measles
prob05163  Human cytomegalovirus infection
prob05164  Influenza A
prob05165  Human papillomavirus infection
prob05166  Human T-cell leukemia virus 1 infection
prob05167  Kaposi sarcoma-associated herpesvirus infection
prob05168  Herpes simplex virus 1 infection
prob05169  Epstein-Barr virus infection
prob05170  Human immunodeficiency virus 1 infection
prob05171  Coronavirus disease - COVID-19
prob05200  Pathways in cancer
prob05202  Transcriptional misregulation in cancer
prob05203  Viral carcinogenesis
prob05206  MicroRNAs in cancer
prob05207  Chemical carcinogenesis - receptor activation
prob05208  Chemical carcinogenesis - reactive oxygen species
prob05212  Pancreatic cancer
prob05215  Prostate cancer
prob05220  Chronic myeloid leukemia
prob05221  Acute myeloid leukemia
prob05222  Small cell lung cancer
prob05235  PD-L1 expression and PD-1 checkpoint pathway in cancer
prob05321  Inflammatory bowel disease
prob05415  Diabetic cardiomyopathy
prob05417  Lipid and atherosclerosis
prob05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:prob00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    127222971 (Nfkb1)
   04014 Ras signaling pathway
    127222971 (Nfkb1)
   04064 NF-kappa B signaling pathway
    127222971 (Nfkb1)
   04668 TNF signaling pathway
    127222971 (Nfkb1)
   04066 HIF-1 signaling pathway
    127222971 (Nfkb1)
   04071 Sphingolipid signaling pathway
    127222971 (Nfkb1)
   04024 cAMP signaling pathway
    127222971 (Nfkb1)
   04151 PI3K-Akt signaling pathway
    127222971 (Nfkb1)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    127222971 (Nfkb1)
   04218 Cellular senescence
    127222971 (Nfkb1)
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    127222971 (Nfkb1)
   04620 Toll-like receptor signaling pathway
    127222971 (Nfkb1)
   04621 NOD-like receptor signaling pathway
    127222971 (Nfkb1)
   04622 RIG-I-like receptor signaling pathway
    127222971 (Nfkb1)
   04623 Cytosolic DNA-sensing pathway
    127222971 (Nfkb1)
   04625 C-type lectin receptor signaling pathway
    127222971 (Nfkb1)
   04660 T cell receptor signaling pathway
    127222971 (Nfkb1)
   04658 Th1 and Th2 cell differentiation
    127222971 (Nfkb1)
   04659 Th17 cell differentiation
    127222971 (Nfkb1)
   04657 IL-17 signaling pathway
    127222971 (Nfkb1)
   04662 B cell receptor signaling pathway
    127222971 (Nfkb1)
   04062 Chemokine signaling pathway
    127222971 (Nfkb1)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    127222971 (Nfkb1)
   04917 Prolactin signaling pathway
    127222971 (Nfkb1)
   04926 Relaxin signaling pathway
    127222971 (Nfkb1)
  09156 Nervous system
   04722 Neurotrophin signaling pathway
    127222971 (Nfkb1)
  09158 Development and regeneration
   04380 Osteoclast differentiation
    127222971 (Nfkb1)
  09149 Aging
   04211 Longevity regulating pathway
    127222971 (Nfkb1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    127222971 (Nfkb1)
   05202 Transcriptional misregulation in cancer
    127222971 (Nfkb1)
   05206 MicroRNAs in cancer
    127222971 (Nfkb1)
   05207 Chemical carcinogenesis - receptor activation
    127222971 (Nfkb1)
   05208 Chemical carcinogenesis - reactive oxygen species
    127222971 (Nfkb1)
   05203 Viral carcinogenesis
    127222971 (Nfkb1)
   05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
    127222971 (Nfkb1)
  09162 Cancer: specific types
   05212 Pancreatic cancer
    127222971 (Nfkb1)
   05221 Acute myeloid leukemia
    127222971 (Nfkb1)
   05220 Chronic myeloid leukemia
    127222971 (Nfkb1)
   05215 Prostate cancer
    127222971 (Nfkb1)
   05222 Small cell lung cancer
    127222971 (Nfkb1)
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    127222971 (Nfkb1)
   05170 Human immunodeficiency virus 1 infection
    127222971 (Nfkb1)
   05161 Hepatitis B
    127222971 (Nfkb1)
   05160 Hepatitis C
    127222971 (Nfkb1)
   05171 Coronavirus disease - COVID-19
    127222971 (Nfkb1)
   05164 Influenza A
    127222971 (Nfkb1)
   05162 Measles
    127222971 (Nfkb1)
   05168 Herpes simplex virus 1 infection
    127222971 (Nfkb1)
   05163 Human cytomegalovirus infection
    127222971 (Nfkb1)
   05167 Kaposi sarcoma-associated herpesvirus infection
    127222971 (Nfkb1)
   05169 Epstein-Barr virus infection
    127222971 (Nfkb1)
   05165 Human papillomavirus infection
    127222971 (Nfkb1)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    127222971 (Nfkb1)
   05135 Yersinia infection
    127222971 (Nfkb1)
   05133 Pertussis
    127222971 (Nfkb1)
   05134 Legionellosis
    127222971 (Nfkb1)
   05152 Tuberculosis
    127222971 (Nfkb1)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    127222971 (Nfkb1)
   05145 Toxoplasmosis
    127222971 (Nfkb1)
   05140 Leishmaniasis
    127222971 (Nfkb1)
   05142 Chagas disease
    127222971 (Nfkb1)
  09163 Immune disease
   05321 Inflammatory bowel disease
    127222971 (Nfkb1)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    127222971 (Nfkb1)
   05022 Pathways of neurodegeneration - multiple diseases
    127222971 (Nfkb1)
  09165 Substance dependence
   05030 Cocaine addiction
    127222971 (Nfkb1)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    127222971 (Nfkb1)
   05418 Fluid shear stress and atherosclerosis
    127222971 (Nfkb1)
   05415 Diabetic cardiomyopathy
    127222971 (Nfkb1)
  09167 Endocrine and metabolic disease
   04936 Alcoholic liver disease
    127222971 (Nfkb1)
   04932 Non-alcoholic fatty liver disease
    127222971 (Nfkb1)
   04931 Insulin resistance
    127222971 (Nfkb1)
   04933 AGE-RAGE signaling pathway in diabetic complications
    127222971 (Nfkb1)
  09176 Drug resistance: antineoplastic
   01523 Antifolate resistance
    127222971 (Nfkb1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:prob03000]
    127222971 (Nfkb1)
Transcription factors [BR:prob03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   RHR (Rel homology region) Rel/Ankyrin
    127222971 (Nfkb1)
SSDB
Motif
Pfam: RHD_DNA_bind RHD_dimer Ank Ank_2 Ank_4 Ank_3 Ank_5 Death
Other DBs
NCBI-GeneID: 127222971
NCBI-ProteinID: XP_051041400
LinkDB
Position
Unknown
AA seq 971 aa
MADDDPYGTGQMFHLNTALSHPIFNAELYPTEMPLSTDGPYLQILEQPKQRGFRFRYVCE
GPSHGGLPGASSEKNKKSYPQVKICNYVGPAKVIVQLVTNGKNIHLHAHSLVGKHCEDGI
CTVVAGPKDMVVGFANLGILHVTKKKVFETLEARMTEACIRGYNPGLLVHSDLAYLQAEG
GGDRQLTDREKEIIRQAALQQTKEMDLSVVRLMFTAFLPDSTGSFTRRLEPVVSDAIYDS
KAPNASNLKIVRMDRTAGCVTGGEEIYLLCDKVQKDDIQIRFYEEEENGGIWEGFGDFSP
TDVHRQFAIVFKTPKYKDVNITKPASVFVQLRRKSDLETSEPKPFLYYPEIKDKEEVQRK
RQKLMPNFSDSFGGGSGAGAGGGGMFGSGGGGGSTGSPGPGYGFPHYGFPTYSGITFHPG
ATKSNAGITHGTISTESKNNPNDCDKIGDRETVTLPEKAAAEQDKESGTPSTKADAVALT
PAMEDKEWGAGFQDNLFLEKALQLAKRHANALFDYAVTGDVKMLLAVQRHLTTVQDENGD
SVLHLAIIHFHAQLVRDLLEVTSGLICDDIINMRNDLYQTPLHLAVITKQEAVVEDLLRV
GADLSLLDRWGNSALHLAAREGHDKILSVLLKNRKAARLIDHPNGEGLNAIHIAVMSNSL
PCLLLLVAAGAEVNAQEQKSGRTALHLAVEYDNISLAGCLLLEGDAHVDSTTYDGTTPLH
IAAGRGSTRLAALLKAAGADPLVENFEPLYDLDDSWEKAGEDEGVVPGTTPLDMAANWQV
FDILNGKPYERVFTSDDMLPQGDMKQLTEDTRLQLYKLLEIPDPNKNWATLAQKLGLGIL
NNAFRLSPAPSKTLMDNYEVSGGTIKELMEALRQMGYTEAIEVIQAAFCTPETTASSPVT
TAQAHMLPLSSSSTRQHLDELRDSDSICDSGVETSFRKLSFTESLPGDGSLLSLNKMPHN
YGQEGPIEGKI
NT seq 2916 nt   +upstreamnt  +downstreamnt
atggcggacgatgatccatacggaactgggcagatgtttcacttgaatactgctctgtct
catccaatatttaatgcagaattatatccaacagaaatgccactgtcaactgatggccca
taccttcaaatattagagcaaccaaaacagaggggatttcgattccgctatgtatgtgaa
ggcccgtcacatggcgggctccctggtgcctctagtgagaagaacaagaaatcctaccct
caggtcaaaatttgcaactatgtgggacctgcaaaggttattgttcaattggtcacaaat
ggaaaaaatatccacctgcatgcccacagcctggtgggcaaacactgtgaggacgggatc
tgcactgtagtagctggacccaaggacatggtggttggctttgcgaacctgggaatactt
catgtaactaagaaaaaggtatttgaaacactggaggcacggatgacagaggcgtgtata
cgaggctataatcctggacttctggtgcactctgaccttgcctatctacaagcagaaggt
ggaggagaccggcagctcacagacagggagaaggagatcatccggcaggcagctctgcag
cagacgaaggagatggacttgagtgtggtacgcctcatgttcacagccttccttcctgac
agcactggcagcttcacccggagactggagcccgtggtatcagatgccatctacgacagc
aaggcccccaatgcatccaacctgaaaatcgtgcggatggacagaactgcagggtgtgta
accggaggagaagaaatttatcttctctgtgacaaggttcagaaagatgacatccagatt
cggttttatgaggaggaagaaaatggtggaatttgggaaggatttggagacttttccccc
acagatgttcatagacagtttgccattgtcttcaaaactccaaagtataaggatgtcaac
attacaaaaccagcttccgtgttcgttcagcttcggaggaaatcagatttggaaactagt
gaaccgaaacccttcctctactaccctgaaatcaaagacaaagaggaagttcagaggaaa
cgccagaagctcatgcccaacttctcggacagtttcggcggcggcagtggagccggagca
ggcggtggaggcatgtttggtagtggcggtggcggagggagtaccggaagtcctggccca
gggtatggcttcccacactacggatttcctacttacagtggaattacattccaccctgga
gccactaaatccaacgctgggatcacccatggaaccataagtacagaatcgaaaaataac
cctaatgactgtgacaagattggtgaccgagagactgtaaccctgcctgagaaggctgca
gcagaacaagataaggagtctggcacgcccagcaccaaggccgatgcggttgcactgaca
cccgccatggaagacaaggaatggggtgctggctttcaggataacctctttcttgagaag
gctctgcagcttgccaagaggcatgccaatgcccttttcgactatgcggtgacaggagat
gtgaagatgttgctggctgtgcagcgccatctcaccacggtgcaggatgagaatggggac
agtgtcttacacttagccatcatccactttcatgctcagcttgtgagggatctgctagaa
gtcacatctggtttgatctgtgatgacatcatcaacatgagaaatgatctctatcagaca
cctttgcacttggccgtaatcaccaagcaggaagctgtggtggaggacttgctgagggtt
ggggctgacctgagccttctggaccgctggggaaactctgctctgcacctagctgccaga
gaaggacacgacaagatcctcagtgtcctgctcaagaacaggaaggcggcacgccttatc
gaccaccccaacggggaaggtctaaatgccattcacatagctgtgatgagcaatagcctg
ccatgtctgctgctgcttgtggctgcgggggcagaagtcaacgctcaggagcagaagtct
gggcgcacagcactgcacctggccgtggagtacgacaacatctctttggccggctgcctg
cttctagagggtgatgcccatgtggacagcaccacctatgatgggactacaccgctacat
atagcagctggaagggggtccaccagactggcagctcttctgaaagcagcaggagcagac
cccctggtggagaactttgagcctctctatgacctggatgactcttgggagaaggctgga
gaagatgagggagtggtgccagggaccacacccctggacatggctgccaactggcaggta
tttgacatactaaatgggaaaccgtatgagcgtgtgttcacgtctgatgatatgcttcca
cagggagacatgaaacagctaacagaagatacaaggctgcagctctacaaactgctggag
atccctgatccgaacaaaaactgggccactctggcacagaagttaggtctgggaatcctt
aataatgccttccggctgagtcctgccccttctaaaactcttatggataactatgaggtc
tcggggggcaccatcaaagagctgatggaggccctgcggcagatgggctacacagaggcc
attgaagtgatccaggcagccttctgcaccccggaaaccacagcctccagccccgtgacc
actgctcaggcccacatgctgcctctctcatcttcctccacaaggcagcacttagatgag
cttcgggacagtgacagcatctgtgacagtggtgtggagacgtccttccgcaaactcagc
tttacggagtctttgcctggtgacggctcactgctatctctgaacaaaatgccccacaat
tatgggcaggaaggacctatagaaggcaaaatttag

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