Phodopus roborovskii (desert hamster): 127223109
Help
Entry
127223109 CDS
T08852
Symbol
Vcam1
Name
(RefSeq) vascular cell adhesion protein 1
KO
K06527
vascular cell adhesion molecule 1
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04064
NF-kappa B signaling pathway
prob04514
Cell adhesion molecules
prob04668
TNF signaling pathway
prob04670
Leukocyte transendothelial migration
prob04933
AGE-RAGE signaling pathway in diabetic complications
prob05143
African trypanosomiasis
prob05144
Malaria
prob05417
Lipid and atherosclerosis
prob05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
127223109 (Vcam1)
04668 TNF signaling pathway
127223109 (Vcam1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
127223109 (Vcam1)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
127223109 (Vcam1)
09160 Human Diseases
09174 Infectious disease: parasitic
05144 Malaria
127223109 (Vcam1)
05143 African trypanosomiasis
127223109 (Vcam1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
127223109 (Vcam1)
05418 Fluid shear stress and atherosclerosis
127223109 (Vcam1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
127223109 (Vcam1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
prob04090
]
127223109 (Vcam1)
04091 Lectins [BR:
prob04091
]
127223109 (Vcam1)
CD molecules [BR:
prob04090
]
Proteins
127223109 (Vcam1)
Lectins [BR:
prob04091
]
I-type lectins (Siglecs)
127223109 (Vcam1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
ig
C2-set
Ig_2
V-set
C2-set_2
ICAM1_3_5_D2
Ig_5
C1-set
ICAM_N
Ig_4
Ig_6
Motif
Other DBs
NCBI-GeneID:
127223109
NCBI-ProteinID:
XP_051041578
LinkDB
All DBs
Position
Unknown
AA seq
732 aa
AA seq
DB search
MVMILGASMVLWILFAASQAFKLDISPQDKMIAQIGDSLSLTCNTTGCESPSFSWRTQID
SPLHGRTKIEGSKSVLIMDAVSSENEHSYLCTATCGSQKLEREIQVNVYSFPKDPEVQLS
GPLEVGKPVMVKCLVPDVYPSDSLEVELFKGDHLLTTQMFLEAMEKKSLVTKSLEVTFTP
GTDDIGKAFVCRARLHIDSVTKERETVEKLQVYISPKNTVISVYPSRRLQEGDAVMMTCS
SEGLPAPEIFWSKKLDSGNLQLLSGNATLTLIAMRMEDSGIYVCEGVNLIGRDKAELELV
VQEKQFTVDISPGPWVSAKIGDLVTLECSVDDCDSPTFSWRTETDSPPNGEVRNERAKSV
LIIEHASFEDEHTYLVTVTCAGRKLEKTIHLEVYSFPKDPEIEMSGPLVHGTPVTINCTV
PDVYPFNHLEIELLKEETMLMNKRFGEEMSTKSLETKSLEMTFIPTIEDTGKDLVCWAKL
HNGELDSEPKQRQSTQTLYVNAAPREITIWVSPSPILYEGSPVNLTCSSDGFPAPKILWS
RQLNNGELQPLSEDAMLTLTSTKTEDSGIYVCEGTDQMGTSKKLVELIIQASPKDIQLTA
FPSESVKEGDTVIISCTCGNMPETWIILKKKAKTGDMVLKSVDGSYTILKAQLQDAGVYE
CESKTKVGSQLRSLTLDVKGRENKKVYISPELLALYCASSLIIPAIGMIIYFARKANMKG
SYSLVEAQKSKV
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggtcatgatcttgggagcctcaatggtactttggatactgtttgcagcctctcaagct
tttaaactcgacatctcccctcaagacaaaatgatcgctcaaattggggactctttgtcc
ctgacttgcaacaccacaggctgtgagtctccatctttctcttggagaacccagatagat
agtccacttcatggcaggacaaagatcgaggggtccaagtctgtcctgatcatggatgct
gtcagttctgagaatgaacactcttacctgtgcacagcaacttgtggatctcagaaactg
gaacgagaaatccaggtgaatgtctactcattccctaaggatcccgaggttcagctgagt
ggccccctggaggttgggaagcctgtcatggtcaagtgtctggttcctgatgtctaccca
tctgatagtctggaggtggagctattcaaaggtgaccatctcctgacgactcagatgttt
ctggaagcgatggagaaaaagtctttggtaaccaagagtttggaagtcacctttactcct
ggcactgacgatattggaaaagcttttgtttgccgagctagattacacattgattctgtg
accaaagaaagggaaactgtcgaaaaactgcaagtctacatctctcccaagaatacagtt
atctctgtatatccctccagaaggcttcaagagggtgatgctgttatgatgacatgttcc
agtgagggtctaccagctcctgagattttctggagcaagaaattagatagtggaaatcta
cagctcctctcgggaaatgcaactctcactttaattgctatgagaatggaagattctgga
atttatgtgtgcgaaggagttaatctgattgggagagacaaagcagagttggaattagtt
gttcaagagaaacaatttactgttgacatctcccctggaccctgggtgtctgcaaagatt
ggagacttagttacactggaatgttctgttgatgactgtgactctcccactttttcttgg
agaaccgagacagatagcccccctaacggagaggtgaggaatgagagggccaagtccgta
ctgataatagaacatgcgagttttgaggatgaacacacttacctggtcactgtgacatgt
gctggaaggaaactggaaaagacaatccacttggaggtctactcattccccaaagacccc
gaaattgaaatgagtggtccacttgtgcacggaacacctgtcactataaactgcacagtc
cctgatgtgtacccttttaaccatctggagattgaattactgaaggaggaaactatgctg
atgaataaacgttttggagaggaaatgagcacaaaatccctggagactaaaagtttggaa
atgaccttcatccctaccattgaagatactggaaaagatcttgtttgctgggctaagtta
cacaatggtgaattggactctgaacccaaacaaagacagagtacacagactctttatgtc
aacgctgcccccagggaaatcaccatctgggtcagcccatctcccatcctgtatgagggc
agtcctgtgaacctgacctgctcaagcgatggttttccagctccaaaaatcctgtggagc
aggcagctaaataatggggaactgcagcctctttccgaagatgcaatgctcaccttaaca
tctacaaaaacagaagattccggcatttatgtgtgtgaagggactgaccagatgggaact
agcaaaaaattagttgaactgattatccaagcctctccaaaagatatacagcttacagcc
ttcccctctgagagtgtcaaagaaggagacactgttattatctcctgcacatgtggaaac
atgccagaaacctggataatcctgaagaagaaagcaaagacaggagacatggtgttaaag
tctgttgatggctcatacaccatcctcaaggcacagctgcaggatgccggagtgtacgag
tgtgaatctaaaaccaaagttggctcacaattaagaagtttaacccttgatgtaaaaggg
agagaaaataagaaggtctatatttctcctgaactccttgcactctactgtgcatcctcc
ttaataattcctgccattgggatgatcatctacttcgcaagaaaagccaatatgaaagga
tcatacagtctggtggaagcacagaaatcaaaggtgtag
DBGET
integrated database retrieval system
