Phodopus roborovskii (desert hamster): 127223394
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Entry
127223394 CDS
T08852
Symbol
Tpr
Name
(RefSeq) nucleoprotein TPR
KO
K09291
nucleoprotein TPR
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03013
Nucleocytoplasmic transport
prob05014
Amyotrophic lateral sclerosis
prob05200
Pathways in cancer
prob05216
Thyroid cancer
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127223394 (Tpr)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
127223394 (Tpr)
09162 Cancer: specific types
05216 Thyroid cancer
127223394 (Tpr)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
127223394 (Tpr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prob03019
]
127223394 (Tpr)
Messenger RNA biogenesis [BR:
prob03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127223394 (Tpr)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
Seryl_tRNA_N
Spectrin_2
Motif
Other DBs
NCBI-GeneID:
127223394
NCBI-ProteinID:
XP_051041900
LinkDB
All DBs
Position
Unknown
AA seq
2417 aa
AA seq
DB search
MASRGFDGSRRGSLRRAGAREPVSDAADGAPQASGFRASPSSFVSPSAAAATTPADMAAV
LQQVLERPELNKLPKSTQNKLEKFLADQQSEIDGLKGRHEKFKVESEQQYFEIEKRLSQS
QERLVNETRECQNLRLELEKLNNQVKVLTEKNKELESAQDRNLGIQSQFTRAKEELEAEK
RDLIRTNERLSQEVEYLTEDVKRLNEKLKESNTTKGELQLKLDELQASDVAVKYREKRLE
QEKELLHNQNSWLNTELKTKTDELLALGREKGNEILELKCNLENKKEEVLRLEEQMNGFK
TSNEHLQKHVEDLLTKLKEAKEQQASMEEKFHNELNAHIKLSNLYKSAADDSEAKSNELT
RAVDELHKLLKEAGEANKTIQDHLLQAEESKDQLEKEMLEKIGKLEKELENANDLLSATK
RKGAILSEEELAAMSPTAAAVAKIVKPGMKLTELYNAYVETQDQLLLEKLENKRINKYLD
EIVKEVEAKAPILKRQREEYERAQKAVASLSAKLEQAMKEIQRLQEETDKANKHSSVLER
DNQRMEVQIKDLSQQIRVLLMELEEARGNHVIRDEEVSSADISSSSEVISQHLVSYRNIE
ELQQQNQRLLFALRELGETREREEQETTSSKISELQHKLENSLTELEQLRESRQHQMQLV
DSIVRQRDMYRILLSQTTGMAIPLQASSLDDISLVSTPKRSSTSQTVSTPAPVSVIESTE
AIEARAALKQLQEIFENYKKEKVDSEKFQNEQLEKLQEQVTDLRSQNTKISTQLDFASKR
YEMLQDNVEGYRREITSLQERNQKLTATTQKQEQIINTMTQDLRGANEKLAVAEVRADNL
KKEKEMLKLSEVRLSQQRESLLAEQRGQNLLLTNLQTIQGILERSETETKQRLSSQIEKL
EHEISHLKKKLENEVEQRHTLTRNLDVQLLDTKRQLDTEINLHLNTKELLKNAQKEIATL
KQHLNNMEVQLASQSTQRPGKGQPSDRDDVDDLMSQLRQAEEQVNDLKERLKTSASNVEQ
YRAMVTSLEDSLNKEKQVTEEVHKNIEVRLKESAEFQTQLEKKLMEVEKEKQELQDDKRK
AIESMEHQLSELKKTLSSVQHEVQEALQRASTALSNEQQARRDCQEQAKIAVEAQNKYER
ELMLHAADVEALQAAKEQVSKMTSVRQHLEETTQKAESQLLACKASWEERERVLKDEVSK
SVSRCEDLEKQNRLLHDQIEKLSDKVVASMKEVVQTPLNVSVSEEGKSQEQILEILRFIR
REKEIAETRFEVAQVESLRYRQRVELLERELQELQDSLNAEREKVQITAKTMAQHEELMK
KTETMNVVMETNKMLREEKERLEQNLQQMQAKVRKLELDILPLQEANAELSEKSGMLQAE
KKLLEEDVKRWKARNQHLVNQQKDPDTEEYRKLLSEKEIHTKRIQQLNEEVGRLKAETAR
SNASLTNNQNLIQSLKEDLNKVRNEKENIQKDLDAKIIDIQEKVKTITQVKKIGRRYKTQ
YEELKAQQDKAMESSTQSSGDHQEQHISVQEMQELKDTLSQSETKTKSLESQVESLQKTL
SEKETEARNLQEQTAQLQSELSRLRQDLQDRTTQEEQLRQQITEKDEKTRKAIVAAKSKI
AHLAGVKDQLTKENEELKQRNGALDQQKDELDVRMTALKSQYEGRISRLERELREHQERQ
LEQRDEPQEPTNKAPEQQRQITLKTTPASGERGIASTSDPPTANIKPTPVVSTPSKVTAA
AMAGNKSTPRASIRPMVTPATVTNPTTTPTATVMPTTQVESQEALQSEGPVEHVTVFGSA
SGSVRSTSPNVQPSISQPILTVQQQTQATAFVQPTQQSHPQIEPANQELSPNIVEVVQSS
PVERPSTSTAVFGTVSATPSSSLPKRTREEEEDSTAEAADQAPDDTVEMPLPKKLKTVTP
VGTEEEVMAEESTDGEVETQVYNQDSQDSIGEGVTQGDYTPMEDSEETSQSLQIDLGPLQ
SDQQTTSSQDGQGKGDDVIVIDSDDEDDDEENDGEHEDYEEDEDDDDDDEDDTGMGDEGE
DSNEGTGSADGNDGYEADDAEGGDGTDPGTETEESMGGAESNQRAADSQNSGEGSTSAAE
SSFSQEVAREQQPTSASERQTPRAPQSPRRPPHPLPPRLTIHAPPQELGPPVQRIQMTRR
QSVGRGLQLTPGIGGMQQHFFDDEDRTVPSTPTLVVPHRTDGFAEAIHSPQVAGVPRFRF
GPPEDMPQTSSSHSDLGQLASQGGLGMYETPLFLAHEEESGGRSVPTTPLQVAAPVTVFT
ESTTSDASEHASQSVPMVTTSTGTLSTTNESATGDDGDEVFVETESEGISSEAGLEIDSQ
QEEEPVQASDESDLPSTSQDPPSSSSVDTSSSQPKPFRRVRLQTTLRQGVRGRQFNRQRG
VSHAMGGRGGINRGNIN
NT seq
7254 nt
NT seq
+upstream
nt +downstream
nt
atggcatcccggggttttgacgggtcccgccgcgggagtctcaggcgggcaggcgcgagg
gagccagtgagcgacgccgcagacggggcgcctcaggcgtctgggtttcgcgcttcgccc
agctccttcgtttctccttcggccgctgctgccacgaccccggccgacatggcggcggtg
ttgcagcaagtcctggagcgcccggagctgaacaagcttcctaagtcgacccagaacaaa
cttgagaagttcctggctgatcagcagtcggagatcgacggcctgaaggggcgtcacgag
aaatttaaggttgagagcgaacaacaatactttgagatagagaagaggttatcccagagt
caggagaggcttgtaaatgaaacccgtgagtgtcagaacttgcggctggagcttgagaag
ctaaataaccaagtaaaagtgttaactgagaaaaacaaagaacttgaaagtgctcaagat
cgtaatctaggcattcagagccagtttacgagagcaaaggaagagttagaagctgaaaag
agagacctaatcagaaccaatgagagactgtctcaggaagttgaatatttaacagaggat
gttaaacgtctaaatgagaagcttaaagaaagcaatacaacaaagggtgaacttcagtta
aagttggatgaactgcaggcttctgatgttgctgtgaagtatcgagaaaaacgtttagaa
caagaaaaggagttgctacacaaccagaattcatggctcaatacagagttgaaaaccaaa
actgatgagctattggctctaggaagagaaaaaggaaatgaaattctggaacttaagtgt
aatcttgagaacaaaaaggaagaggttttgagactggaagaacagatgaatggcttcaaa
acatcaaatgaacatcttcaaaaacatgtagaggacttgttgacaaagttaaaagaggcc
aaagagcagcaggccagtatggaagagaaattccacaatgaattaaatgctcacataaaa
ctctccaatctatacaagagtgctgctgatgactcagaggcaaagagcaatgaactaact
cgggctgtggatgaacttcacaaacttctgaaagaagctggagaagccaacaaaacaata
caagatcatcttctacaagctgaagaatctaaagatcaactggaaaaagaaatgcttgag
aaaataggaaaattggagaaggaattagagaatgcaaatgacctgctttctgccacaaaa
cgtaaaggggctatactgtctgaagaagagcttgcagccatgtctcctactgcagcagct
gtagctaaaattgtaaagcctggcatgaaattaactgagttatataatgcttatgtggaa
actcaggatcagttgcttttggagaaactagaaaacaaaaggatcaataagtatctagat
gagatagtaaaagaagtggaagccaaagcgccgattttaaaacgccagcgtgaagagtat
gagcgagctcagaaagcagtggcgagtttatctgcaaagctggaacaagctatgaaggag
atccagcgattgcaagaggaaactgataaagctaacaaacattcatcagtacttgaaagg
gacaatcagagaatggaagtgcaaataaaagatctttcacaacagattagagtactcttg
atggagcttgaagaagcacggggtaaccatgtgattcgtgatgaggaggtcagctctgct
gacataagtagttcatctgaagtaatatcgcagcatctagtatcttacaggaatattgaa
gagcttcagcaacagaaccagcgtctgttatttgctcttcgagaacttggggaaacccgg
gaaagagaagaacaagagacaacttcctctaaaatttctgagcttcaacacaaacttgag
aactctctcactgaactggaacagctccgtgagtcacgacagcatcaaatgcagcttgtt
gattccatagttcgtcagcgtgacatgtaccgaattttattgtcacagacaacaggaatg
gccattccattacaagcttcaagcttagatgatatttctcttgtgtcaactccaaaacgt
tcaagtacatcacagactgtttctactcctgctccagtttctgtcattgaatccacagag
gctatagaagccagggctgccctgaaacagttgcaggaaatctttgagaactataaaaaa
gaaaaagtagacagtgaaaaatttcagaatgagcagctggagaaacttcaagagcaagtc
acagacttgcgctcacaaaacaccaaaatttctactcagttggattttgcttctaaacgg
tatgaaatgctgcaagataatgttgaaggatatcgccgagaaataacatctctgcaagag
agaaatcagaaactcactgcgacaactcagaagcaggaacagatcatcaatacaatgaca
caggacttgagaggggccaatgagaagcttgctgttgcagaagtaagagcagacaatctg
aagaaggaaaaggaaatgcttaaattatcagaagtccgtctgtctcagcaaagagagtct
ttgttagcggaacagaggggacagaacttgttgctgactaatctacagacaatccaggga
atattagagcgatctgaaaccgaaaccaaacaaagactgagtagccagatagaaaaactg
gaacatgagatctctcacctaaagaagaagctggagaacgaggtggaacaaagacataca
cttactaggaatctagatgttcaactgttagatacaaagagacagctagatacagagata
aatcttcatcttaacacaaaagaactattaaagaatgctcaaaaggaaattgctacactg
aaacagcaccttaataatatggaagtccagcttgcttctcagtctacacagagacctggt
aaaggtcagcctagtgacagagatgacgtcgatgatcttatgagtcagctaaggcaggct
gaagagcaagtcaatgacttgaaggagagactcaagacaagtgctagtaacgtggagcaa
tatcgtgcaatggtgactagtttagaagattccctgaacaaggagaaacaggtgactgaa
gaagtgcataagaatattgaagtccgtttaaaagaatcagcagagtttcagacacaattg
gagaaaaagttgatggaagtagagaaggaaaaacaagaacttcaggatgacaagagaaaa
gccattgaaagcatggagcatcaattatctgaattgaagaaaacactttctagtgtccag
catgaagtacaggaagctctgcagagagcaagcacggctttaagtaatgagcagcaagcc
aggcgtgactgtcaggaacaagcgaaaatagctgtagaagctcagaataagtatgagaga
gaattgatgctgcatgctgcagacgtggaagctcttcaagccgccaaggaacaggtttct
aaaatgacatcagtccgtcagcatttggaagagacaactcagaaagcagaatcacagctg
ttggcatgtaaagcatcttgggaagaaagagagagagtgttgaaggatgaagtttctaag
agtgtgtctcgctgtgaagatctagagaaacaaaacagactacttcatgatcaaattgag
aagctaagtgacaaggtggttgcctctatgaaggaggttgtacaaacaccattaaatgtc
tctgtcagtgaagaaggaaaatctcaagaacagattttagaaattcttaggtttatacga
cgagaaaaagaaattgctgaaactaggtttgaggtggctcaggttgaaagtcttcgttat
cggcaaagagttgaacttttagaacgggagttgcaagaacttcaggacagcttgaatgca
gaaagggagaaggtgcagataactgcaaaaacaatggctcaacatgaagaactgatgaag
aaaactgaaacaatgaatgtagtcatggaaaccaataagatgctaagagaagaaaaagaa
aggcttgagcagaacctgcagcaaatgcaagcgaaggtaaggaaactggagttagatatt
ttacctttacaagaagccaatgctgagctcagtgagaaaagtggtatgctgcaggcggag
aagaagctgctagaagaggatgtcaagcgctggaaagcacggaaccagcatctggtaaat
cagcaaaaagatccagatacagaagaataccggaaacttctctctgagaaggaaattcac
acaaagagaattcagcagctaaatgaagaagttggaagacttaaggctgaaactgcaaga
tcaaatgcatccttgactaacaaccaaaatttaattcagagtctaaaggaagatttaaac
aaagtacgaaatgaaaaggaaaacattcagaaagatttagatgccaaaataattgatata
caagaaaaagtcaaaacgatcactcaagttaagaaaattggacgcagatacaagactcag
tatgaagaacttaaagcccagcaggataaggccatggagagttccactcagtcttctggt
gaccatcaggagcagcacatctctgtccaggaaatgcaggagctcaaagataccctcagc
caatctgaaacaaagacaaagtcccttgagagtcaagtggagagcttgcagaagacatta
tctgaaaaagagacagaagcaagaaatctccaggagcagactgcacagcttcagtctgaa
ctgtcacgcctacgtcaggaccttcaggatagaacaacacaggaggagcagctccggcag
caaataaccgagaaggatgagaagacaaggaaggcaattgtagcagcaaaatcaaaaatt
gcacatctagctggtgtaaaagatcagttaactaaagaaaatgaagagcttaagcaaagg
aatggagctttagatcaacagaaagatgaactggatgtccgaatgactgctctaaagtcc
cagtatgaaggtcggattagtcgcttagagagagaactcagagagcatcaggagagacaa
cttgagcagagagatgagcctcaggagcccactaataaggctccagaacagcagagacag
atcacactgaaaaccactccagcttctggcgaaagaggaattgccagtacatcagaccca
ccgacagccaatatcaagccaactcctgttgtttctactccaagtaaagtgacagcagca
gctatggctggaaataagtcaacacccagggcaagcatccgcccaatggttacacctgca
actgtcacaaacccaaccactaccccaacagcaactgtaatgcccaccacacaggtggag
tcccaggaagctctgcagtcagaagggccagtggaacatgttacagtgtttggaagtgcc
agtggatctgttcgttctactagtcctaatgttcagccctccatttctcagcccatccta
actgtacagcagcaaacacaggctacagcttttgtgcaacccactcaacagagtcaccct
cagattgagcccgcaaatcaagagttgtccccaaacatagttgaggtggtacaaagttca
ccagttgagcgaccgtctacttccacggcagtgtttggcactgtttcagcgaccccaagt
tcttccttgccaaaacgcactcgggaggaggaggaggacagcactgcagaagcagcagac
caggcccctgatgacactgtggaaatgcctctcccaaagaaactgaagacagtcacaccc
gtgggaactgaggaagaagttatggcagaagaaagtactgatggagaggtagaaactcaa
gtttataatcaggattctcaagattccattggagaaggagtcacacagggcgattataca
cctatggaagacagtgaagaaacatcacaatctctacaaatcgatcttggaccacttcaa
tcagatcagcaaaccacttcttcccaggatggtcaaggcaaaggagatgatgtaattgta
attgatagtgatgatgaagatgatgatgaagaaaatgatggagaacatgaagattatgaa
gaagatgaagatgatgatgatgatgatgaagatgacacggggatgggagatgagggtgaa
gatagtaatgaaggaactggtagtgcagatggtaatgatggatatgaagctgatgatgct
gagggtggtgatgggactgatccaggtacagaaacagaagaaagtatgggtggagcagaa
agtaatcagagagctgctgattctcaaaacagtggtgaaggaagtacaagtgcagcagaa
tcatctttctctcaggaggttgctcgagaacagcagcccacatcagcatctgagagacag
acccctcgagcaccccagtcaccaaggcgccccccacatcctcttcccccacgcctaacc
attcacgctccaccccaggaattgggaccaccagttcagagaattcagatgacccggagg
cagtctgtagggcgtggacttcagttgactccaggaataggtggtatgcaacaacacttc
tttgatgatgaagacagaacagttcccagtaccccaactcttgtggtgccacatcgcact
gatgggtttgctgaagctattcattccccacaggttgctggtgttcctagattccggttt
gggccacctgaagacatgccacagacaagttccagtcactctgatcttggccagcttgct
tctcaaggaggtttggggatgtatgaaacgcccctctttctggctcatgaggaagagtct
ggcggccgtagtgttcccactacacctctccaagtagcagccccagtgaccgtgtttact
gagagtaccacatctgatgcttcagaacatgcctcccagtctgttccaatggtgacaaca
tccacaggcactttatccacgacaaatgagtcagcaacaggtgatgatggagatgaagta
tttgtggagacagagtctgaaggtattagttcagaggcgggcctagaaattgatagccag
caggaagaggagcctgtgcaagcatctgatgaatccgatctcccctcaaccagccaggac
cctccttccagctcttctgtggatactagcagtagtcagccaaagcctttcagacgagta
agacttcagacaacattgagacaaggtgttcgtggtcgccagtttaacagacagagaggt
gtaagccatgcaatgggaggaagaggaggaataaatagagggaatattaattaa
DBGET
integrated database retrieval system
