Phodopus roborovskii (desert hamster): 127232702
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Entry
127232702 CDS
T08852
Symbol
Fdps
Name
(RefSeq) farnesyl pyrophosphate synthase isoform X1
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob00900
Terpenoid backbone biosynthesis
prob01100
Metabolic pathways
prob05164
Influenza A
prob05166
Human T-cell leukemia virus 1 infection
Module
prob_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
127232702 (Fdps)
09160 Human Diseases
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
127232702 (Fdps)
05164 Influenza A
127232702 (Fdps)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
prob01006
]
127232702 (Fdps)
Enzymes [BR:
prob01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
127232702 (Fdps)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
127232702 (Fdps)
Prenyltransferases [BR:
prob01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
127232702 (Fdps)
BRITE hierarchy
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
127232702
NCBI-ProteinID:
XP_051054854
LinkDB
All DBs
Position
Unknown
AA seq
420 aa
AA seq
DB search
MSLSRLLRSAGVFLLPAPCWAPRERWLGSLQRPSLAYGCPVLGAWHSARWWCKVWTEQPR
VFCSSLRMNGNQKLEACNQEKQDFIQHFSQIMKVLTEDGLDHPETGDAITRLKEVLEYNV
VGGKYNRGLTVLQAFRELVEPRKQDAENLQRALTVGWCVELLQAFFLVSDDIMDSSLTRR
GQICWYQKPGIGLDAINDAVLLEACIYRLLKFYCREQPYYLNLLELFLQSSYQTEIGQTL
DLITAPQGHVDLDRYTEKRYKSIVKYKTAFYSFYLPVAAAMYMAGIDGEKEHANAMKILL
EMGEFFQIQDDYLDLFGDPSVTGKVGTDIQDNKCSWLVVQCLQRATPQQRQILEDNYGQK
DPDKVAQVKALYEAQDLPAVFLKYEEDSYNRLKSLIEQYSAPLPPAIFLELAKKIYKRKK
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgtcccgcttgctgagatctgcaggggtcttcctgttgccggccccctgctgg
gcaccccgggagaggtggcttggttccctacaacgaccctccctggcatatgggtgtcca
gtcctgggggcctggcacagtgcccgctggtggtgcaaagtgtggacagagcagcctcga
gtattttgctcgtctctcagaatgaatgggaaccagaaattggaagcttgtaaccaagaa
aagcaggatttcatccagcacttctcccagatcatgaaggtgttgactgaggacgggcta
gaccacccagagactggcgatgccattacccggctcaaggaggtcctagagtacaatgtt
gtgggaggcaagtacaatcggggtttgactgtgctgcaagcattccgggagctggtggag
ccgaggaaacaggatgctgagaatcttcagcgggccctgactgtgggctggtgtgtagaa
ctgctccaggcgttctttcttgtgtcggatgacatcatggactcctccctcactcgccgc
ggacagatctgctggtatcagaagccaggcataggcttggatgccatcaatgacgccgtg
cttctggaagcctgcatctaccgcctactgaagttctactgcagggagcagccctactac
ctgaaccttctggagctctttctacagagttcttatcaaacggagatcgggcagactctc
gacctcatcacagcaccccagggccatgtggatcttgatagatacactgaaaagaggtac
aaatctattgtcaagtacaagacagctttctattctttctacttgcctgtcgcagctgcc
atgtacatggcaggcattgatggggagaaggaacacgccaatgctatgaagatcctgctg
gagatgggcgagttctttcagatccaggacgactaccttgatctctttggtgaccccagt
gtgaccgggaaggttggcactgacatccaggacaacaaatgcagctggctggtggttcag
tgtctgcagcgagccactcctcaacagcgccagatcctagaggacaattatgggcagaag
gatccagacaaggtggcccaggtaaaagcactgtatgaagcgcaggatctgccggctgtg
ttcttgaagtacgaggaagacagttacaaccgcctcaagagcctcatagaacagtactct
gcgcccttgcccccagccatattcttggaattagcaaaaaagatctacaagcggaaaaag
tga
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