Phodopus roborovskii (desert hamster): 127237679
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Entry
127237679 CDS
T08852
Name
(RefSeq) histone-lysine N-methyltransferase PRDM9
KO
K20796
[histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:
2.1.1.354
]
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob00310
Lysine degradation
prob01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
127237679
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
prob03000
]
127237679
03036 Chromosome and associated proteins [BR:
prob03036
]
127237679
Enzymes [BR:
prob01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
127237679
Transcription factors [BR:
prob03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
127237679
Chromosome and associated proteins [BR:
prob03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
127237679
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
127237679
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
SSXRD
KRAB
SET
zf_PR_Knuckle
Motif
Other DBs
NCBI-GeneID:
127237679
NCBI-ProteinID:
XP_051062006
LinkDB
All DBs
Position
Unknown
AA seq
445 aa
AA seq
DB search
MQGGSSGNPRIPCCFFFFFFFFFFNLQVKDEFKDISIYFSKEEWSEMGEWEKIRYRNVKR
NYKMLISIGLKAPRPAFMCCQRQAFKPQIDESEDSDEEWTPKQQGSPPWVPSRVKHTKQQ
KETQRILLSKESNVQEVSGPENLLNTSGSEHAQKTVASPEEGNASGQHTGQKPKLRRKNV
EVKMYSLRERKGLAYEEVNEPQDDDYLYCEKCQNFFINSCPNHGPPIFVKDSVVDRGHHN
SSVLSLPPGLRIGPSGIPEAGLGVWNEASDLPVGLHFGPYKGQITDDEEAANSGYSWLIT
KGRNCYEYVDGQDASQANWMRYVNCARDDEEQNLVAFQYHRQIFYRTCRVIRPGCELLVW
YGDEYGQELGIQWGSKNKKGFATGRGEHYDGPLKNKEKKEFLKMFIGQRSILVFCALWPS
QVRNSSVSMCNGIIVLKSSQEHLQR
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggaggctcgagtggaaacccaaggatcccatgctgttttttttttttttttttt
ttttttttttttaatctccaggtcaaagatgagttcaaagatatttccatatacttctcc
aaagaagaatggtcagagatgggagagtgggagaaaattcgctataggaatgtgaaaagg
aattataaaatgctgatttctataggtctcaaagcgcccagaccagctttcatgtgttgc
caaaggcaagcattcaagccccaaatagatgaaagtgaggactctgatgaagaatggaca
cctaagcagcaaggtagtcctccttgggtgccttcccgagtgaagcatactaaacaacag
aaggaaacacagagaatactattaagtaaagaatctaatgtgcaggaagtatctggacct
gaaaatttgttgaatacaagtggctcagaacatgcccagaaaacagtggcctctcctgaa
gaaggaaatgcttctggacagcacactggacaaaaaccaaagctaaggagaaagaatgtt
gaggtaaagatgtacagtcttcgtgagagaaagggccttgcatatgaagaggtcaacgag
ccgcaggatgatgactacctctattgtgagaagtgccagaatttcttcatcaacagttgt
cccaaccatgggcctcctatatttgtaaaagacagtgtcgtggacagggggcatcacaat
agctcagtcctcagtctgccccctgggctgagaattggtccatcaggcatccctgaggct
ggacttggagtatggaatgaagcatctgacctgccagtgggtctgcactttggcccctat
aaaggccagatcacagatgatgaagaggcggctaacagtggctactcctggctgatcacc
aaggggagaaactgctatgagtatgtggatggacaggatgcatcccaagccaactggatg
aggtatgtgaactgtgcccgggatgatgaggagcagaacctggtggcctttcagtatcac
agacagatcttctatcgaacttgccgggtcattagacctggttgtgagcttctggtctgg
tatggggatgagtatggccaggaactgggcattcagtggggaagcaagaacaagaaagga
ttcgccacgggaagaggtgagcactatgatggccccttaaaaaacaaagagaagaaggaa
ttcttgaaaatgttcataggacagagatccatccttgtcttttgtgctctttggccttct
caagtccgaaattcctcagtcagcatgtgcaatggaatcatcgtactcaaatcttctcag
gagcatcttcaacgatga
DBGET
integrated database retrieval system
