Prodigiosinella aquatilis: PCO85_01270
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Entry
PCO85_01270 CDS
T09220
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
prod
Prodigiosinella aquatilis
Pathway
prod00071
Fatty acid degradation
prod00280
Valine, leucine and isoleucine degradation
prod00310
Lysine degradation
prod00362
Benzoate degradation
prod00380
Tryptophan metabolism
prod00410
beta-Alanine metabolism
prod00640
Propanoate metabolism
prod00650
Butanoate metabolism
prod00907
Pinene, camphor and geraniol degradation
prod00930
Caprolactam degradation
prod01100
Metabolic pathways
prod01110
Biosynthesis of secondary metabolites
prod01120
Microbial metabolism in diverse environments
prod01200
Carbon metabolism
prod01212
Fatty acid metabolism
Module
prod_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
prod00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
PCO85_01270 (fadB)
00650 Butanoate metabolism
PCO85_01270 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
PCO85_01270 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PCO85_01270 (fadB)
00310 Lysine degradation
PCO85_01270 (fadB)
00380 Tryptophan metabolism
PCO85_01270 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
PCO85_01270 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
PCO85_01270 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PCO85_01270 (fadB)
00930 Caprolactam degradation
PCO85_01270 (fadB)
Enzymes [BR:
prod01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
PCO85_01270 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
PCO85_01270 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
PCO85_01270 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
PCO85_01270 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
WJV54154
LinkDB
All DBs
Position
complement(275348..277537)
Genome browser
AA seq
729 aa
AA seq
DB search
MLYQGENLYVNWLEDSIAELVFSATGSVNKLDIQTVSSLGAALDILALQHDLKGLVLRSD
KPAFIVGADITEFLSLFAAPKEKLHQWLTDANDIFSRLEDLPVPTISAIKGYALGGGCEC
VLATDFRIATADIRIGLPEVKLGIMPGFGGTVRLPRLLGADSALDIIAAGKDIGAEAALK
VGLVDAVVADDKLVAAALLMLHQAIAGKLNWRAYRAPKLVPLKLGKVEATMSFATTKAMV
MQTAGKHYPAPITAVKTIEAAAGLPRDAALRVETDNFVALTQTDAAHTLVGVFLNDQYVK
GTAKKQVGSTSAPEEAAVVGAGIMGGGIAYQSALKGVPILMKDINETALTLGMNEAAKLL
NKQLERGKLNAVKMAGIFSSIHPTLNYAGFERADVVVEAVVENPKVKASVLAETESHVHE
DTVIVSNTSTIPIVKLAQALTRPQNFCGMHFFNPVHRMPLVEIIRGPQTDEKTISRVIAY
ALHMGKTPIVVNDCPGFFVNRVLFPYLAAFSLLMRDGADFREIDNVMERQFGWPMGPAYL
LDVVGIDTAHHAQSVMAEGFPSRMDKNYRDVIDVLFEHQRFGQKNGVGFYRYQTDNKGKP
HKEFDENIDELLATVCQARRRFSAEEIVSRLMIPMINEVALCLEENVIASPAEADMALIY
GLGFPAFHGGACRYFDTLGSARYLEMAQPLSHMGPLYQIPESVRQKARNKEGYYPTVAPH
ADISHRQPA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctttatcaaggcgaaaacctctacgttaactggcttgaagatagcattgctgagctg
gtattttctgctacagggtcagttaataaactcgatatacagacagttagtagcctcggt
gctgctctggatatactggcactacagcatgatctaaaaggtttggtactgcgttcggac
aaacccgcgtttattgtcggggcagatattaccgaattcctctctttatttgcggcccct
aaagaaaaactgcaccaatggctgacggatgcaaatgacattttcagccgcctggaggat
ttgccagtaccgacgatttctgccatcaaaggttatgctctgggtggcggctgcgaatgc
gtgctggcaactgatttccgcattgctactgcggatatacgaatcggcttaccggaagtg
aagttggggatcatgcccggctttggcggtacggttcgactgcctcgtttgctgggtgcg
gatagcgcactggatattatcgccgcaggtaaagatatcggtgctgaagcagcactgaaa
gttggcctggttgatgccgtcgtcgcagacgataaactggttgcggcggcgttactcatg
ttgcatcaggcaattgcaggaaagttgaactggcgtgcttatcgcgcgcccaaactggta
ccgctaaaactcggtaaagttgaagccaccatgagttttgctactaccaaagccatggtg
atgcaaaccgctggaaaacattatcccgccccgatcactgcggtaaaaaccattgaagcg
gcagcgggtttgccgcgtgatgccgccctgcgcgttgaaacagataactttgtcgccctc
acacaaactgatgctgcccatactctggtgggagtatttctgaatgatcagtatgttaag
ggaacagcgaaaaaacaggtggggagtacttccgcccccgaggaggccgccgtcgtaggt
gcagggatcatgggtggcggtatcgcctaccaatcggcattaaaaggcgttcctatcctg
atgaaagatattaatgaaaccgcgctgacacttggtatgaatgaggcagccaaactactg
aataagcaactggaacgcggaaagctcaatgccgtaaaaatggcgggtattttttccagt
attcatcccaccttaaattacgccggttttgaacgtgccgatgtggtcgtcgaagccgtg
gtagaaaaccccaaagtgaaggccagcgtattggctgaaactgaatcccacgtccatgaa
gatacagtgatagtgtccaacacctcgaccattccgattgtgaaactggcccaggcactg
acgcggccacagaacttctgcggtatgcatttttttaatccggttcaccggatgccgttg
gtagaaatcattcggggtccgcaaactgacgaaaaaaccatttcccgtgttatcgcttat
gcgctccacatggggaaaacccctatcgtggtgaatgattgcccgggatttttcgttaac
cgtgtcctgtttccctaccttgccgctttcagtctactgatgcgtgacggcgcggatttt
cgtgaaattgataacgtgatggaacgacaatttggctggccaatgggaccggcatacctg
ctggatgtcgtgggaatcgatacagcccaccatgcccaatccgttatggcagaaggcttt
ccctcacgtatggacaaaaattaccgcgacgttattgacgtgttatttgaacatcagcgg
tttggtcaaaaaaatggagtgggcttttatcgttatcagaccgacaacaagggcaaacca
cacaaagaattcgatgaaaatattgatgagctgctggccacagtttgtcaggcacgtcgt
cgcttcagtgccgaagagatcgtctcccgcctgatgatcccgatgattaacgaagtggcg
ctctgtctggaagaaaacgtgatcgccagtccggctgaagcagatatggcactgatctat
ggcctgggatttccagcgttccacggtggagcctgccgctatttcgacaccctgggcagc
gcgcgttatctggagatggctcagccactgtcacacatggggccgctctatcaaattcct
gaaagcgtgcggcaaaaagccagaaataaagaaggttattatccgactgtcgcgcctcac
gccgacatctcccatcgtcaaccagcataa
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