Prosthecochloris sp. GSB1: CHL67_04520
Help
Entry
CHL67_04520 CDS
T04996
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
pros
Prosthecochloris sp. GSB1
Pathway
pros00540
Lipopolysaccharide biosynthesis
pros01100
Metabolic pathways
pros01250
Biosynthesis of nucleotide sugars
Module
pros_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pros00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
CHL67_04520 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pros01005
]
CHL67_04520 (rfaD)
Enzymes [BR:
pros01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
CHL67_04520 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
pros01005
]
Core region
CHL67_04520 (rfaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
DAO
Ldh_1_N
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
ASQ90284
UniProt:
A0A222SIA9
LinkDB
All DBs
Position
complement(956670..957662)
Genome browser
AA seq
330 aa
AA seq
DB search
MIVITGGAGFIGSAMLWELNRNGIEDVIVVDELASATTGKWKNLAGLGFRDFIHKNDFLE
RLSSGREPGGISAVIHMGAISDTTETDADLLLKNNYEFSKELATYCIAGGIRFIYASSAA
TYGDGSRGYSDEEKRLESLRPLNMYGYSKQLFDLWALRSGALAKFAGLKFFNVFGPNEYH
KNDMSSVVFKAFNQIRETGEVRLFESHRSDYRHGEQMRDFIYVKDCTAIMLWLLENPSVN
GIFNVGSGRARSFRDLVEATFSAMEREPSISYVPMPEKLRDKYQYFTQAESGKLNACGCP
VEPSALEDGVRDYVRNHLATENPYLDRQRT
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtcattaccggcggcgctggctttatcggcagcgccatgctgtgggaactcaac
cggaacggcattgaagacgtcattgtcgtcgatgaactcgcctcggcaacgaccggaaaa
tggaaaaacctcgcgggcctcggattcagggacttcattcacaaaaacgactttctcgaa
cggctttcgtctggcagggagcctggcggcatcagcgccgtcattcacatgggagcgatc
agcgacacgactgaaaccgacgccgacctcctgctgaaaaacaactacgagttctcgaaa
gaactggcgacatactgtattgccggaggaatacgattcatttacgcatcgagcgcggcg
acatacggtgacggctcgaggggatacagcgacgaggaaaagcgcctcgaaagtctccgt
cccctgaacatgtacggctactcgaagcaattgttcgatctctgggctctcaggtcggga
gcgcttgcaaaattcgcggggttgaaattcttcaacgtcttcggcccgaacgaatatcac
aagaacgacatgagcagcgtcgttttcaaggcattcaaccagatacgcgaaaccggagag
gtcaggcttttcgaatcgcaccggagcgattacaggcacggcgagcagatgcgtgacttc
atctacgtcaaggattgcacggccattatgctctggctgctggaaaatccttcggtcaac
gggattttcaatgtcggcagcggaagggcccggagttttcgcgaccttgtcgaggccacg
ttctcggcaatggaacgcgaaccttccatcagttacgtgcccatgccggaaaaactgcgc
gacaaataccagtatttcacacaggccgaatccgggaaactcaacgcctgtggatgcccc
gtcgagccgtcggcgctcgaggacggggtacgcgattacgtccgtaaccacctcgcgacg
gagaacccgtatctcgacaggcagcgcacctga
DBGET
integrated database retrieval system
