Pyrgilauda ruficollis (rufous-necked snowfinch): 121350840
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Entry
121350840 CDS
T07608
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H-like isoform X1
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04010
MAPK signaling pathway
pruf04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121350840
04020 Calcium signaling pathway
121350840
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pruf04040
]
121350840
Ion channels [BR:
pruf04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
121350840
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
DUF3043
Motif
Other DBs
NCBI-GeneID:
121350840
NCBI-ProteinID:
XP_041318487
LinkDB
All DBs
Position
Unknown
AA seq
2296 aa
AA seq
DB search
MLVILLNCVTLGMFQPCEDVECQSERCTILEAFDDFIFAFFAVEMVIKMVALGIFGQKCY
LGDTWNRLDFFIVMAGMMEYSLDGHNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDT
LPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFLDRNFAMTYNLTFLHPYYRPDEAEE
NPFICSSHRENGMQRCSNIPSRKESKVECTLSMESYSPSLASPEPSRNSCINWNQYYNIC
MAGDVNPHNGAINFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGS
FFMINLCLVVIATQFSETKQRENQLMQEQRARYLSNDSTIASFSEPGSCYEELLKYICHI
FRKVKRRTIRLYNNWQSKRRKKVNPNSGGGGGQSQRSRRRITSIHHLIHHHHHHHHHHYH
ISNGSPRGPRANPEICELELQVMKPGRQLMLPPPASPRPQGPAGAVHSIYHADCHVEGPP
GGCRATSSPVGSKLARLGGHGSMNYPTILPSPSGKGGSAALPKGKKNGSSPAAVGNSPGS
LGLDSYGKLQQLVGEHGLRRTPSRLSGLSAAGALPSPGGPGLSCELQDCPFCASLLDDPE
FALSDSDSNGDSDSNGVYEFTQDLRHGDHRDQLQQQRGRRRRKKKKAKERNKVVKLWKAF
GTKLKRIVESKYFNRGIMIAILINTLSMGIEYHEQPDELTNALEISNIVFTSMFALEMLL
KLLAFGIFGYIKNPYNIFDGIIVVISVWEIIGQSDGGLSVLRTFRLLRVLKLVRFMPALR
RQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHLFGCKFSLKTDTGDTVPDRKNFDSLLW
AIVTVFQILTQEDWNVVLYNGMASTSSWAALYFVALMTFGNYVLFNLLVAILVEGFQAEG
DANRSDTDEDKTSANFEDEFEKLKDFRATEMKMYSLAVTPNGHLEGRGAVPPPIIMRTAA
TPMPTPKCSPHLDSLHALGDSRRGSNASLDPTGYDQKSLSSLRSSPCANWATSSTWGSRR
SSWNSLGRAPSLKKKNQSGERESLLSGEGKGSTDDDSDDAKSSTPSRPSPPRRAESLDRR
GSQELPELLRVPSVRQLGLGPAALLPAELRGCNGKMGHGAAEFFLRVDAHKEDVLDYEDD
VEDSYCYRIRKALEPYKPQWCKTHENWSLYVFSPQNRFRVMCQKVIAHKMFDHVVLVFIF
LNCITIALERPDIDPLSTERIFLSVSNYIFTAIFVAEMMVKVVALGFFSGENTYLQSSWN
VLDGVLVFVSIIDIIVSMASAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVETLIS
SLRPIGNIVLICCAFFIIFGILGVQLFKGKFYYCDGPDVKNITTKADCTNAHYKWVRRKY
NFDNLGQALMSLFVLSSKDGWVNIMYDGLDAVGIDQQPIQNHNPWMLLYFISFLLIVSFF
VLNMFVGVVVENFHKCRQHQEAEEARRREEKRLRRLEKKRRSKEMYLSEAQRRPYYADYS
PARRYIHSLCTSHYLDLFITFIIGVNVITMSMEHYNQPNSLDEALKYCNYVFTIVFVFEA
LLKLVAFGFRRFFKDRWNQLDLAIVLLSIVGITLEEIEMNAALPINPTIIRIMRVLRIAR
VLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGKLDCSEENPCEG
LSRHATFTNFGMAFLTLFRVSTGDNWNGIMKDTLRECTREDKHCLSYLPVISPVYFVTFV
LIAQFVLVNVVVAVLMKHLEESNKEAKEDAEMDAEIELEMSRGAGGSRSGAVAVESRALH
GNLEHTKGKHQGLGSAASLRAQDSQNLLTVRKISVSRMHSLPNDSYMFRPVTPATAPLPL
HEVEMETYPCKAQRGSITSIRSQPVVGSSSLRVPTEAARCPGHDGRHRWKGLAPHGTPRS
PALSKLLCRQEAVRTDSVDGQTPEHKDSVQAEPGEPQPSAKQPQSTLTPSPLHSPLPATP
PRSPPSSPHRPLGPLARKHTCGQHSVPSRPPSPGSPPNPEGCQGEPSDLADEEVRHINSS
AKDWAEEHSDPGSRSTSPFTSPVPSPVPLKNCSTSSLSRREKDLKKFYSTDTKGFLSKPS
WADEQRRHSIEICPSGGAADCGFQEPAEDKQRPPGHVQPEADYIHGARRKKKMSPPCISI
DPPMEDDGAAAPRTKPSENTLLRRRTPSCEFPAYRESLELPESRGEHLSIPNFSFEQLDG
GSLSSLSELLDSGQSTPASVDSRPDAELKKQDHLKTQRGNGKERGKELLGTAKSPLHKQD
LGPVTVATEEGTDDPV
NT seq
6891 nt
NT seq
+upstream
nt +downstream
nt
atgctggtgatcctgctcaactgcgtcaccctgggcatgttccagccctgcgaggacgtg
gagtgccagtcggagcgctgcaccatcctggaggcatttgatgacttcattttcgccttc
tttgccgtggaaatggtcatcaagatggtggccctgggcatcttcgggcagaagtgttac
cttggagacacctggaaccgcctggacttcttcatcgtcatggcagggatgatggaatat
tccctggatggccacaacgtcagcctctccgccatccgcaccgtgcgcgtcctgcggccg
ctgcgggccatcaacagggtcccaagtatgaggatcctggtcacgctgctgctggacact
ctgcctatgttaggcaacgtcctcctcctctgcttctttgtcttcttcatctttgggatc
gtcggggtccagctctgggcagggctgctgaggaacaggtgcttcctagacaggaatttt
gccatgacgtacaacctgaccttccttcacccctactaccggccggacgaggcggaggag
aaccccttcatctgctcctcgcaccgggagaacggcatgcagaggtgctccaacatcccc
agcaggaaggagtccaaggtggagtgcaccctgagcatggagtcctacagccccagcctg
gccagccccgagcccagcaggaactcctgcatcaactggaaccagtactacaacatctgc
atggccggggacgtgaacccccacaacggggccatcaattttgataatattggatatgcc
tggattgctatttttcaggtgataaccctggaaggatgggtggacatcatgtattacgtg
atggatgcgcactctttttacaattttatatattttatattgcttatcatagtgggctcc
ttcttcatgatcaacctgtgcctggtggtgatcgccacccaattttcggagaccaagcag
cgggagaaccagctgatgcaggagcagcgggcgcgctacctgtccaacgacagcaccatc
gccagcttctcggagccgggcagctgctacgaggagctgctcaagtacatctgccacatc
ttcaggaaggtgaagagaaggaccatccgcctctacaacaactggcagagcaaacgccgg
aaaaaagtcaaccccaacagcggcggcggcggcgggcagagccagcggagcaggaggaga
atcacctccatccaccacctgatccaccaccaccaccaccaccaccaccaccactaccac
atcagcaacgggagcccgcgggggcctcgtgccaaccccgagatctgcgagctggagctg
caggtgatgaagccgggccggcagctgatgctgccgccgcccgcctcgcccaggccgcag
ggccccgccggggccgtgcacagcatctaccacgccgactgccacgtggaggggcctccc
gggggctgcagggccaccagtagccctgtgggcagcaaactggccaggctgggcggccac
ggcagcatgaactaccccaccatcctgccctcccccagcggcaagggcggctcggcggcc
ctgcccaaagggaagaagaacgggagttctccggcggccgtggggaacagcccagggagt
ttgggcctggattcgtacgggaagctgcagcagctggtgggagagcacggtctccgccgg
acacccagccggctgtcggggctgagcgcggccggggctctgcccagccctggtggcccc
gggctgagctgcgagctgcaggactgtcccttctgtgccagcctcctggacgaccccgag
ttcgccctcagcgactccgacagcaacggcgactccgacagcaacggcgtctacgagttc
acgcaggacctgcggcacggcgaccaccgggaccagctccagcagcagcggggcaggagg
aggaggaagaagaagaaggccaaggagaggaacaaggtggtgaagctctggaaggcgttc
ggcaccaaactcaagaggatcgtggagagcaagtacttcaaccgcgggatcatgatcgcc
atcctcatcaacaccctcagcatgggcatcgagtaccacgagcagccagacgagctgacc
aacgccctggagatcagcaacatcgtcttcaccagcatgtttgccctggagatgctcctg
aaactcctggcctttgggatctttggctacatcaagaacccctacaacatcttcgacggg
atcatcgtggtcatcagtgtctgggagatcattgggcagtcggacgggggcctgtccgtg
ctcaggacgttccggctgctccgcgtgctgaagctggtgcgcttcatgcccgccctgcgc
cgccagctcgtggtgctcatgaagaccatggacaacgtggccaccttctgcatgctgctc
atgctcttcatcttcatcttcagcatccttggtatgcatctttttgggtgcaagttcagc
ctgaaaaccgacacgggagacacggttccagacaggaagaattttgattccttactttgg
gccatcgtgaccgtgttccagatcctcacgcaggaggactggaacgtggtgctctacaac
gggatggcctccacctcctcctgggccgccctctacttcgtggccctgatgacctttggc
aattacgtgctcttcaacctgctggtggccatcctggtggaaggattccaggcagaggga
gatgccaacaggtcagacacagatgaggacaagacatctgccaacttcgaggacgagttt
gagaagctgaaagacttcagagcaacagagatgaagatgtactcgctggctgtcactcca
aatgggcacctggagggcaggggggccgtgcccccgcccatcatcatgcgcacggcggcc
accccgatgcccaccccgaagtgctccccacacctggactccctgcacgccctcggggac
tcgaggagaggcagcaacgcctcgctggaccccacgggctacgaccagaagtccttgtcc
agcctccgcagctccccctgcgccaactgggccaccagcagcacctggggcagccgccgc
tccagctggaacagcctgggccgggcgccgagcctcaagaagaagaaccagtcgggagag
cgggaatcgctgctgtccggagagggcaagggcagcacggacgacgactcggacgacgcc
aagtccagcacgccgagccgaccctcgccgccgcgccgggcggaatccctggatcgccgc
ggctcccaggagctgcccgagctgctgcgggtgccctccgtgcggcagctgggcctgggc
cccgccgccctgctgcccgccgagctccgcggctgcaacggcaagatgggccacggcgcc
gccgagttcttcctcagggtggacgcgcacaaggaggacgtgctggactacgaggatgac
gtggaggatagttattgctaccggatccgcaaagccctggagccctacaaaccccagtgg
tgcaagactcacgagaactggtccctctacgtgttctccccacagaacaggttccgagtg
atgtgccagaaggtcattgcccacaaaatgtttgaccacgtggtgctggtcttcatcttc
ctcaactgcatcaccatagctctggagagaccagacatcgaccccctgagcacagagagg
atattcctaagtgtctctaattacatcttcactgccatcttcgtggctgaaatgatggtt
aaggtggtagctcttggctttttctctggggagaacacgtacctgcagagcagctggaac
gtcctggatggagtgctggtctttgtatccatcattgacatcattgtgtccatggcatca
gcaggaggagccaaaatcctgggagtccttcgtgtgttgaggcttctgcggaccctgaga
cctctccgagtcatcagcagagccccaggtctgaagctggtggtggaaaccttgatctcc
tccttgaggccaattgggaatattgttctcatctgctgtgctttcttcattatctttggg
attttaggggtccagctttttaaaggcaagttctactactgtgatggccctgatgtcaaa
aacattaccacaaaggccgactgcaccaatgctcactacaaatgggtccggaggaagtac
aactttgacaacttggggcaggccctgatgtccctgtttgtcctctcctccaaggacggc
tgggtgaacatcatgtacgacgggctggatgccgtgggcattgaccaacagcccatccag
aaccacaacccttggatgctgctctacttcatctccttcctgctcatcgtcagcttcttc
gtgctcaacatgttcgtgggggtggtggtggagaacttccacaagtgccggcagcaccag
gaggcggaggaggcgcggcgccgggaggagaagcggctgcggcgcctggagaaaaagcgc
aggagtaaggagatgtacctgtctgaagcccagcgcaggccctactacgccgactactcc
ccggccaggaggtacatccacagcctgtgcaccagccactacctcgacctcttcatcacc
ttcatcatcggcgtcaacgtcatcaccatgtccatggagcactacaaccagcccaattcc
ctggatgaagccctcaagtactgcaactacgtgttcaccatcgtctttgtgttcgaggca
ctgctcaagttggtggcctttggtttccggaggttttttaaggacaggtggaaccagctg
gacttggccatagtcctgctgtccattgtggggatcactctggaggagatcgagatgaac
gctgccctgcccatcaaccccaccatcatccgcatcatgagggtgctcaggatagccaga
gtgctgaaactgctgaaaatggccacgggcatgagagctctgctggacacggtggtgcaa
gccctgccccaggtagggaaccttggcctactttttatgctcctgttttttatctatgct
gccctgggagtggaattgtttggcaagctggattgcagtgaggagaatccctgtgaaggc
ctgagccgccacgccaccttcaccaacttcggcatggccttcctcaccctcttcagagtg
tccacgggggacaactggaacgggatcatgaaggacacactccgggagtgcacgcgggag
gacaagcactgcctcagctacctgcccgtcatctcccccgtctacttcgtcaccttcgtc
ctcatcgcccagttcgtcctggtcaacgtggtggtggcagtgctgatgaagcacctggag
gagagcaacaaggaggccaaggaggacgctgagatggacgctgagatcgagctggagatg
tccagaggagccggcgggagcaggagtggggccgtggccgtggagagccgggcgctgcac
gggaacctggagcacaccaagggcaagcaccaaggcctgggcagtgcagcctcgctgagg
gcccaggactcccagaacctgctgacagtcaggaagatctccgtgtccaggatgcattcc
ctgcccaacgacagctacatgttccggcccgtgaccccggccacggccccgctgcccctg
cacgaggtggagatggaaacctacccctgcaaagcccaaagaggatccatcacctccatc
cgctcccagcccgtggtgggcagctcctcgctgcgggtgcccacggaggccgcgcgctgc
cccggccacgacgggcggcaccgctggaaggggctggccccccacggcaccccccgatct
cctgctctcagcaagctgctctgcagacaggaggccgttcgaacggactcggtagacgga
cagactccggagcacaaagacagcgtgcaagcagagcctggagagccccaaccatcagca
aagcagccccagagcaccctcacccccagccctctccattcccctctcccagccacccct
ccacgctctcccccatcctccccacaccggcccctcggccccctggcacggaagcacacg
tgtggccagcacagcgttcccagccggccacccagccccggcagccctcctaaccccgag
ggctgccagggcgagccctcagacctggctgacgaggaggttcggcacatcaacagctcg
gccaaagactgggcagaggagcactcggaccccggcagccgctccacctcgcccttcacc
tccccggtcccgtcccccgtgcccctcaagaactgcagcacaagcagcctctcccgcagg
gagaaggacttgaagaagttctacagcaccgacaccaagggcttcctcagcaagcccagc
tgggccgacgagcagcggcggcattccatcgagatctgcccctccggcggcgccgcggac
tgcggcttccaggagcccgccgaggacaagcagcggccccctggccacgtccagccggag
gccgactacatccacggagcccggaggaagaagaagatgagcccgccctgcatttctata
gatcctcccatggaggatgacggggcggcggccccacgcaccaaaccctccgagaacacc
ctgctgcggaggagaacgccgtcctgcgagttcccggcctaccgagaatccctggagctc
ccggagagccgaggggagcacctcagcatccccaacttctccttcgagcagctggacggc
ggctccttgagcagcctctcggagctgctggacagcgggcagtccacgccggcctccgtg
gactcgcggccggacgctgagctgaaaaaacaggatcacttaaaaactcagcggggcaac
ggcaaagagaggggcaaagagctgctgggcactgccaagagccccctgcacaagcaggac
ttgggccccgtgactgttgccacagaagaaggcacagatgacccagtatag
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integrated database retrieval system
