Pyrgilauda ruficollis (rufous-necked snowfinch): 121353285
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Entry
121353285 CDS
T07608
Symbol
SETDB2
Name
(RefSeq) histone-lysine N-methyltransferase SETDB2 isoform X1
KO
K18494
[histone H3]-lysine9 N-trimethyltransferase SETDB2 [EC:
2.1.1.355
]
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf00310
Lysine degradation
pruf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
121353285 (SETDB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pruf03036
]
121353285 (SETDB2)
Enzymes [BR:
pruf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
121353285 (SETDB2)
Chromosome and associated proteins [BR:
pruf03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
121353285 (SETDB2)
Heterochromatin formation proteins
Other heterochromatin formation proteins
121353285 (SETDB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SET
Pre-SET
MBD
Motif
Other DBs
NCBI-GeneID:
121353285
NCBI-ProteinID:
XP_041322934
LinkDB
All DBs
Position
Unknown
AA seq
718 aa
AA seq
DB search
MEEKSMLCDFFEEENLTSSREESTEGDVKTFWTQLGGRRVDVIFEQLQNVLSLLKEKIKN
GTATNQECWQAWALVNEANLGDLLTLANVSDELNGDGAQETKPNLQPLLPDDNAVETVEA
SDSEKEDTERTCSGCKESSSKIQGLPLNVQYQNHKCSSACLANRAVGSYKGENPLKIPIL
FNFQRRHAKADCLSKPLDVNYKAPCGRSLRSFRDVRNYLFETECNFLFVDHFSFNTYVLL
GRNTMNPEPLVFEFDISDGAESVPISFCNTLDHARLPYFKYRKSSWPRGYYLNNLSSLFV
DSCDCTDGCIDRSKCACLQLTARGCSKISLSPSIKRSRGYRYKRLEGPVPSGIYECSVLC
RCDKLMCQNRVVQHGIQVRLQVFNTEKKGWGVRCLDDIDKGTFVCTYSGRLMSRAEVLGD
AEEELKEKNAVNDRDHDFSSKKRKLGLDRSDSVIELVQTDKNDILENQESLSQTVDNENK
STLVHLKNSSNAAVRRPGTRTLVFRNHQLKMVHSASSDEDGSSQIHQSSKTKLTSGTKKG
KEKSTQQQKEEHLMEMGQTDSAGVESAGCKSLSLQGVDCGKYSVLSDTCVVRPSSNAPLK
ADCKENSRQPKQDALCEESEGDGVLPKNTNEENIYVLDATKEGNVGRFLNHSCCPNLFAQ
SVFVETHNRSFPWVAFFTNRHVKAGTELTWDYGYEAGSMPETEISCHCGVQKCRKKTL
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggaagagaaaagcatgctgtgtgacttctttgaagaggagaatcttaccagttccagg
gaggagagcactgaaggtgatgtgaagacattttggacacaattgggaggtagaagagtg
gatgtcatatttgagcagctgcaaaacgtgctgtcattgctgaaggaaaagatcaagaat
ggaactgcaacaaaccaagaatgctggcaggcttgggcactggtgaatgaagctaatcta
ggggatctcttaaccttggcaaatgtaagtgatgagttgaatggagatggtgcacaggaa
accaaacccaacctgcagcctcttcttccagatgacaatgctgtagagactgtagaagct
tctgacagtgaaaaagaggacacggaaagaacttgctcagggtgtaaagaatcatctagc
aaaattcaaggtttacctttaaatgtgcagtatcagaaccacaagtgctctagtgcatgt
cttgccaacagagcagtgggttcctacaagggtgaaaatcctctgaagatcccaatcctg
tttaacttccaaagacgccatgcaaaagcagactgcctttcgaagccgctggatgtgaat
tacaaagctccttgtggtcggagtctgaggagctttcgagatgtgcgaaactacttgttt
gaaacagagtgcaatttcttgtttgttgatcacttctccttcaacacatatgtgttgttg
ggcaggaacaccatgaatcccgagcccctcgtgtttgagttcgatattagcgacggagcc
gagtctgtgcccatctccttctgtaacactctcgaccacgcaaggttgccttatttcaag
tatcggaagtcgtcgtggccgcgtggatattacctcaacaacctctccagcctgtttgtt
gattcctgtgactgcacagatggctgcatcgataggtcaaaatgtgcatgcctacagcta
acggcaagaggctgtagtaaaatttctctgtctccaagtattaaaagatcccgtggatac
cgttacaagagactggaggggcctgttcctagtgggatttatgagtgtagtgtgctgtgc
aggtgtgacaagctgatgtgtcagaacagagttgtacagcatggcattcaagtcaggctg
caagtgttcaacacggagaagaagggctggggtgtccgctgcctggatgacatcgacaag
gggacatttgtttgtacttactcaggcagattaatgagcagagctgaagttttgggagat
gctgaggaagagctgaaggagaaaaatgcagtgaatgatagagaccatgacttttcttcc
aaaaaaagaaaacttggccttgatcgttcagactcagtgattgaactagtgcagactgac
aaaaatgacattcttgagaatcaggaatcattgtctcagactgtggataatgaaaataaa
tcaactctggttcatctaaagaattcaagtaatgcagctgtgagaaggcctggaactaga
acacttgtttttcgcaatcaccagctaaaaatggtgcacagtgccagctcagatgaagat
ggtagctctcagattcatcagtcaagcaaaacaaaactaaccagtggaaccaagaaagga
aaagaaaaatccacccagcagcagaaagaagaacatctgatggaaatgggacagactgac
tctgctggtgtagagagtgcaggatgcaagagtctgtcactgcagggtgttgattgtggc
aagtacagtgtgctgagtgacacatgtgttgtgaggccatccagcaatgcacccctaaaa
gctgactgcaaagaaaatagcaggcagccaaaacaagatgcactttgtgaggagtctgag
ggtgatggggtgcttcccaagaacactaatgaagaaaatatttatgtactggatgccaca
aaagaaggaaatgtgggtcgttttctaaatcacagctgctgcccaaatctctttgcacaa
agtgtgtttgtagaaactcacaacagaagttttccctgggtggcattcttcacaaacaga
catgtgaaagctggaaccgaactcacctgggattatggttatgaagctggaagcatgcca
gagacagagatttcctgtcactgtggagttcagaagtgcaggaaaaaaaccttatag
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