Pyrgilauda ruficollis (rufous-necked snowfinch): 121362416
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Entry
121362416 CDS
T07608
Symbol
NOTCH1
Name
(RefSeq) neurogenic locus notch homolog protein 1 isoform X1
KO
K02599
Notch 1
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121362416 (NOTCH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
EGF_CA
Ank_2
EGF_2
Ank
Notch
NOD
NODP
Ank_4
Ank_5
Ank_3
EGF_3
cEGF
Motif
Other DBs
NCBI-GeneID:
121362416
NCBI-ProteinID:
XP_041339835
LinkDB
All DBs
Position
Unknown
AA seq
2556 aa
AA seq
DB search
MERLLAPGLLVLLLPALTRGLRCSQLAESCLNGGKCETFPNGTEVCQCSGAYVGERCQLP
NPCLSSPCKNAGTCTALVRGSTVDYSCACRLGFTDELCLTPRDNVCLSNPCRNGGTCDLL
TLSEYKCRCPPGWSGKTCQQADPCASNPCANGGQCVPFEAHYICRCTAGFHGANCKQDVN
ECNISPPVCKNGGSCTNEVGTYQCSCKPAYTGQNCEHLYVPCNPSPCQNGGTCRQIGDTT
YDCTCLPGFTGQNCEENINDCPGNNCKNGGTCVDGVNTYNCQCPPEWTGQYCTEDVDECQ
LMPNACQNGGTCHNNHGGYNCVCVNGWTGEDCSENIDDCAMAACFHGATCHDRVASFYCE
CPHGRTGLLCHLDDACISNPCNEGSNCDTNPVNGKAICTCPSGYMGPACNQDVDECSLGA
NPCEHAGKCINTQGSFQCQCLQGYSGPRCEIDVNECLSNPCQNDATCLDQIGEFQCICMP
GYEGVYCEINTDECASSPCLHNGNCLDKINEFHCECPTGFNGHLCQFDIDECASTPCKNG
AKCVDGPNTYSCECTEGFTGAHCEIDIDECDPDPCHYGTCKDSIASFTCLCQPGYTGHRC
DININECQSQPCKNGGTCQDRNNAYNCICLKGTTGSNCEINLDDCASNPCDYGKCIDKIN
GYECTCEPGYTGRMCNINIDECASNPCHNGGTCKDGINGFTCLCPEGFHDPKCLSEVNEC
NSNPCIHGKCHDGLNGYKCDCDPGWSGTNCDINNNECESNPCMNGGTCKDMTSGYICTCR
EGFSGPNCQTNINECASNPCLNQGTCIDDVAGYTCNCLLPYTGATCEDVLAPCAGSPCKN
GGECQESEDYKSFSCSCPPGWQGQTCEIDINECVKSPCRNGATCQNTNGSYRCACRTGFS
GRNCDTDIDDCKPNPCHNGGSCSDGIGTFFCECLAGFRGPKCEEDINECASNPCKNGANC
TDCVNSYTCTCPSGFSGIHCENNTPDCTESSCFNGGTCVDGINTFTCICLPGFTGSYCEH
NINECDSKPCLNGGTCQDSYGTYKCTCPQGYTGLNCQNLVRWCDSSPCKNGGKCWQTSNL
YHCECNSGWTGLYCDVPSVSCEVAAKQQGIDVAHLCRNSGLCVDTGNTHFCRCQAGYTGS
YCEEQVDECSPNPCQNGATCTDYLGGYSCKCVAGYRGVNCSEEINECLSHPCQNGGTCID
LINTYKCSCPRGTQGVHCEINVDDCSPFFDPVTLGPKCFNNGKCKDRVGGYSCICPPGFV
GERCEGDVNECLSNPCDARGTQNCVQRVNDYKCECRPGYAGRRCDTVVDGCKGKPCRNGG
TCAVASNTGRGFICKCPPGFVGATCENDSRTCGNLHCLNGGTCISIHKSSKCMCTPAFTG
PECQYPASSPCTSNPCYNGGTCEFFSDASPYYRCNCPANFNGLNCHILDFDFQGGIGQDI
IPPKIEEKCEIAVCVGYAGNKICDGKCNNHACGWDGGDCSLNFNDPWKNCSQSLQCWKYF
NDGKCDSQCNNAGCLYDGFDCQKYEGQCNPLYDQYCKDHFSDGHCDQGCNNFECEWDGLD
CANNMPEKLADGTLVVVVLITPENLKNNSFNFLRELSRVLHTNVVFKKNPKGEYMIFPYY
GNEEELKKHYIKRSTEDWSDMSSAVINKVKSSLYSRAGRRQKRELDQMDIRGSIVYLEID
NRQCIQSSSQCFQSATDVAAFLGALASLGNLNIPYKIEAVKSETAEPTKNSQLYPMYVVV
AALVLLAFIGLGVLVNRKRRREHGQLWFPEGFKVTESSKKKRREPLGEDSVGLKPLKNAS
DGTLMDDNQNEWGDEETLDTKKFRYEEQAMLPDTDDQTDHRQWTQQHLDAADLRISSMAP
TPPQGEIDADCMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEDDAPAVISDFIYQGASL
HNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQIL
IRNRATDLDARMHDGTTPLILAARLAVEGMLDDLINCHADVNAVDDLGKSALHWAAAVNN
VEAAMVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDI
AQERMHHDIVRLLDEYNLVRSPTLHNGPLGAPTLSPPLCSPNSYIGNLKPAVQGKKARKP
STKGLSCNGKDAKDLKARRKKSQDGKGCLLDNSGVLSPVDSLESPHGYLSDVASPPLMTS
PFQQSPSMPLNHLPGMPDAHLSINHLNMAGKQDMAMGNSSRMGFDSVPPRLSHLPVSSPS
TGMSSAPMSFSVGSGASLNGQCDWLTRLQNGMVQSQYNPLRGNLQPGAHQQPQNLQHGMM
TSLHNGLPTTSLSQMMSYQAMPNTRLASQPHLMQSQQLQQMQQQQQQQQQLQQPNLQPPQ
QQQQAQQPQQPPQQPQQHHNPSGSNGSGHLGQNFLGTELSQPELQPVSGSAMAVHTILPQ
DSQMLPTSLPSSLAQPMTTTQFLTPPSQHSYSSPLDNTPSHQLQVPDHPFLTPSPESPDQ
WSSSSPHSNASDWSEGISSPPTSMQSQMGHIPEAFK
NT seq
7671 nt
NT seq
+upstream
nt +downstream
nt
atggagcggctcctggcgcccggcctcctggtgctcctgctgcccgccctgacgcgaggt
ttacggtgctcgcagcttgccgaatcctgcctcaacgggggcaagtgtgaaacttttccc
aacgggacggaggtgtgccagtgtagcggtgcctacgtgggcgagcggtgccagctgccc
aacccctgcctgagctccccctgcaagaacgcgggcacctgcacggcgctggtgcgcggc
agcaccgtggattacagctgcgcctgccgcctgggcttcaccgacgagctgtgcctgacg
ccccgcgacaacgtgtgcctcagcaacccctgccgcaacggcggcacctgcgacctgctg
acgctcagcgagtacaagtgccgctgcccgcccggctggtcaggcaaaacctgccagcag
gccgacccctgtgcctccaacccctgtgccaacgggggccagtgcgtgcccttcgaagcc
cactacatctgccgctgcaccgccggcttccatggcgccaactgcaagcaggacgtcaac
gagtgcaacatctccccgcccgtctgcaagaacgggggcagctgcaccaacgaggtgggc
acctaccagtgctcctgcaagccggcctacaccgggcagaactgcgagcacctctacgtg
ccctgcaacccctcgccctgccagaacgggggcacctgccgccagatcggggacaccacc
tacgactgcacctgcctgccagggttcacgggtcagaactgtgaggagaacatcaacgac
tgcccaggcaacaactgcaagaatgggggcacctgcgtggatggcgtcaacacctacaac
tgccagtgcccacctgagtggacaggtcagtactgcactgaggacgtggacgagtgccag
ctgatgcccaacgcctgccagaacggtggcacctgccacaacaaccacggcggctacaac
tgtgtctgtgtcaacggctggacgggcgaggactgcagcgagaacatcgacgactgcgcc
atggccgcctgcttccacggggccacctgccacgaccgggtggcctccttctactgcgag
tgcccccacggccgcacaggtttgctgtgccacctggatgatgcctgcatcagcaacccc
tgcaacgagggctccaactgcgacaccaaccccgtcaatggcaaagccatctgcacgtgt
ccttcggggtacatggggccagcctgcaaccaggacgtggacgagtgctcgctgggagcc
aacccatgtgagcacgcaggaaagtgcatcaacacccaagggtccttccagtgccagtgt
ctgcagggctactcaggccctcgctgtgagattgatgtcaatgagtgcctctccaacccc
tgccagaatgatgccacctgcctggaccagattggggagttccagtgcatctgcatgcct
gggtacgagggggtttactgcgagatcaacacggacgagtgcgccagcagcccctgcctg
cacaacggcaactgcctggacaagatcaacgagttccactgcgagtgccccactggcttc
aacgggcacctgtgccagtttgacatcgacgagtgcgccagcaccccctgcaagaacggt
gccaagtgcgtggatggccccaacacctacagctgcgagtgcactgaaggtttcacgggt
gctcactgcgagatcgacatcgatgagtgtgatcctgacccgtgccactacgggacctgc
aaggacagcatcgcctccttcacctgcctctgccagcccggctacacgggccaccgctgc
gacatcaacatcaacgagtgccagagccagccctgcaaaaacgggggcacctgccaggac
aggaacaacgcctacaactgcatctgcctcaaagggaccacgggctccaactgcgagatc
aacctggatgattgtgccagcaatccctgtgactacggcaagtgcatcgacaagatcaat
ggctacgagtgcacctgcgagccggggtacacagggcgcatgtgcaacatcaacatcgac
gagtgtgccagcaacccctgccacaacgggggcacgtgcaaggatggcatcaacggcttc
acctgcctctgccccgagggcttccacgaccccaagtgcctgtctgaagtgaacgagtgc
aacagcaacccctgcatccatgggaaatgccatgatggattgaatggctacaagtgtgac
tgtgaccctggctggagtgggacaaactgtgacattaacaacaacgagtgtgaatccaat
ccctgcatgaacggtggcacctgcaaggacatgaccagtggctacatctgcacctgcagg
gagggcttcagcggccccaactgccagaccaatatcaacgaatgtgcttccaacccctgc
ctgaaccagggcacgtgcattgatgatgttgctggctacacctgcaactgcctcctgccc
tacacaggagccacctgtgaggatgtgctggccccctgtgctggcagcccctgcaagaac
ggtggcgagtgccaggagtcagaggactacaagagcttctcctgcagttgcccccctggc
tggcaaggtcagacctgtgagattgacatcaatgagtgtgtgaagagcccctgcaggaat
ggggccacgtgccagaacaccaacgggagctaccgctgtgcctgccgcaccggcttctcc
ggccgcaactgcgacaccgacatcgacgactgcaagcccaatccgtgccacaacggtggc
tcctgctccgatggcattggcacgttcttctgtgagtgcctggctggtttccgtgggccc
aagtgcgaggaggacatcaacgagtgcgccagcaacccctgcaagaacggggccaactgc
accgactgcgtcaacagctacacctgcacctgcccctccggcttcagcggcatccactgc
gagaacaacacccctgactgcacagagagctcctgcttcaatggtggcacatgtgtggat
ggcatcaacaccttcacgtgcatctgcctgcccggcttcacgggcagctactgtgagcac
aacatcaatgagtgtgactccaagccgtgcctgaacgggggcacgtgtcaggacagctac
gggacgtacaagtgcacctgtccccagggatacaccgggctcaactgccagaacttggtg
cgttggtgtgactcctcgccctgcaaaaatggaggcaagtgctggcagaccagcaatctg
taccactgcgagtgcaacagcggctggacagggctctactgcgatgtccccagcgtgtcc
tgcgaggtggctgctaagcagcaaggtatcgatgtagcacatctctgcaggaactcgggg
ctctgtgttgacactggcaacactcatttctgccgctgccaggccggctacaccggcagc
tactgtgaggagcaggtggatgaatgctcccccaacccctgccagaacggagccacctgc
acagactacctgggaggctactcctgcaagtgtgtggctggttatcgtggagttaactgc
tcagaggagatcaatgaatgcttgtcccacccatgccagaatggaggaacttgcatcgat
ctcatcaatacctacaaatgctcctgccccagaggaactcaaggggtgcactgtgagatc
aatgtggatgactgcagccctttctttgatcctgtcaccctggggcccaagtgctttaac
aatggcaagtgcaaggatcgggtaggtggctacagctgcatctgcccccctggctttgta
ggggagcgctgcgagggagatgtcaacgagtgcctgtccaacccctgcgacgcccgcggc
acccagaactgcgtgcagcgggtcaacgactacaaatgcgagtgcagacctggctatgca
ggccgtcgctgtgacaccgtggtggacggctgcaaaggcaaaccctgcaggaatggggga
acctgtgctgttgccagcaacactggccgtggcttcatctgcaagtgtcccccgggattc
gtgggcgccacctgcgagaacgactcgcgcacctgcgggaacctgcactgcctgaacggt
ggcacctgcatctccatccacaagagctccaagtgcatgtgcacgccggccttcacgggc
cccgagtgccagtacccggccagcagcccctgcacctccaacccctgctacaacgggggc
acctgcgagttcttcagcgacgcctccccctactaccgctgcaactgccccgccaacttc
aacggcctcaactgccacatcctggacttcgacttccagggtggcatcgggcaggacatc
atcccccccaagatcgaggagaagtgcgagatcgccgtgtgcgtggggtacgccggcaac
aagatctgcgacgggaaatgcaacaaccacgcctgcggctgggacgggggcgactgctcc
ctcaacttcaacgacccctggaagaactgctcccagtccctgcagtgctggaagtacttc
aacgatggcaagtgtgactctcagtgcaataatgctggctgcctctacgatgggtttgac
tgccagaagtacgaggggcagtgcaaccctctgtatgaccagtactgcaaagatcacttc
tcggatggtcactgcgaccagggctgcaacaattttgagtgcgagtgggatggtctggac
tgtgctaacaacatgccagagaagctggcagatggcactctggtggtggtggtcctcatc
acccccgagaacctgaagaacaactccttcaacttcctgcgggagctgagccgtgtgctg
cacaccaacgtggtcttcaagaagaaccccaagggggagtatatgatcttcccatactat
ggcaacgaggaggagctgaaaaaacattacatcaagaggtccacagaggactggtcagat
atgtccagtgctgtcatcaacaaagtgaagagcagcctctactccagggctggcaggagg
cagaagagggagctcgatcagatggacatcagaggatccattgtctacttggaaattgat
aaccgccagtgcatccagtcatcttcccagtgcttccagagtgccactgatgtggcagca
ttcctgggagccttggcctcccttggcaacctgaacataccctacaaaatagaagctgtc
aaaagtgaaacagccgagcccacgaagaactcccagctgtatcctatgtacgtggtggtg
gcagcgctggtcctgctcgccttcatcgggctgggggtgctggtgaaccgcaagcgccgc
agggagcatgggcagctttggttcccagaaggcttcaaagtgacagagtccagcaagaag
aagcgacgggagcccctcggggaggattctgttgggctgaaacccctcaaaaatgcttcg
gacggcacgctgatggatgacaaccagaatgagtggggtgatgaggagaccttggacacc
aagaagttcaggtacgaggagcaggcgatgctgccggacacggatgaccagacggatcac
aggcagtggacgcagcagcacctggacgccgctgacctgcgcatttcctccatggccccg
acgcctcctcagggggagatcgatgctgactgcatggatgtcaacgtcagagggccggac
ggcttcacccccctcatgatcgcctcgtgcagcggcggagggctggagaccggcaacagc
gaggaggaggacgatgctcccgccgtcatctccgacttcatctaccagggagccagcctg
cacaaccagactgaccgcacgggcgagaccgccctgcacctggccgccaggtactcgcgc
tcggacgctgccaagcgcctgctggaggccagcgctgatgccaacatccaggacaacatg
ggccgcacgccgctgcacgccgccgtctccgccgacgcgcaaggagtcttccagatcctg
attaggaacagggcgacagacctggatgcccgaatgcatgacgggaccactcccctgatc
ctggctgctcgtttggctgtggaggggatgctggatgacctcatcaactgccatgctgac
gtcaacgccgtggatgatttaggcaagtcagccctgcactgggcagctgctgtgaataat
gtggaagctgcaatggtcctcctgaaaaatggtgccaataaggacatgcagaataataag
gaggagaccccactgttcctggcagccagagaagggagctacgaaaccgccaaggtgctg
ctggaccattttgccaaccgggacatcacggaccacatggaccggctgccgcgggacatc
gcccaggagcgcatgcaccacgacatcgtgcgcctgctggacgagtacaacctggtgcgg
agccccacgctgcacaacggccccctgggggcacccaccctgtcccccccgctctgctcc
cccaacagctacatcggcaacctcaaacccgccgtgcagggcaagaaggccaggaagccg
agcaccaaggggctgagctgcaacggcaaggacgccaaagacctcaaagcccggaggaaa
aagtcgcaggatggaaaagggtgtctgctggacaactccggggtgctgtcgccagtggac
tccctggagtcgccgcacgggtacctctcggacgtggcctctccccctctgatgacctct
ccgttccagcagtccccttccatgcctctgaaccacctgccaggcatgcccgatgcccac
ctgagcatcaaccacctcaacatggcgggcaagcaggatatggccatgggcaactccagc
aggatgggcttcgactcggtgccaccgcgcctgtcccacctgccggtgtccagccccagc
acggggatgagcagtgcccccatgagcttctcggtgggcagcggggccagcctgaacggg
cagtgtgactggctcacccggctgcagaacgggatggtgcagagccagtacaaccccctg
agaggcaacctgcagcccggggcgcaccagcagccccaaaacctgcagcacggcatgatg
acctcgctgcacaacgggctgcccaccaccagcttgtcgcagatgatgagctaccaggcc
atgcccaacacccggctggcgtcccagccccacctgatgcagagccagcagctccagcag
atgcagcagcagcagcagcagcagcagcagctccagcagcccaacctgcagcccccgcag
cagcagcagcaggcgcagcagccccagcagccgccgcagcagccgcagcagcaccacaac
cccagcggctccaacgggagcggccacctgggccagaatttcctcggtacggagctgagc
cagcccgagctgcagccggtgagcggcagcgccatggccgtgcacaccatcctgccgcag
gattcccagatgctgcccacctccctgccctcctccctcgcccagcccatgaccaccacg
cagttcctgacccctccttcccagcacagttattcctcccccttggacaacacccccagc
caccagctccaggtgcccgaccaccctttcctgacgccgtcgccggagtcgccggaccag
tggtccagctcctctcctcactccaacgcgtccgactggtccgagggcatctccagccct
cccacgagtatgcagtcgcagatgggacacatccccgaggccttcaagtag
DBGET
integrated database retrieval system
