Pyrgilauda ruficollis (rufous-necked snowfinch): 121363212
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Entry
121363212 CDS
T07608
Symbol
TAF1
Name
(RefSeq) transcription initiation factor TFIID subunit 1 isoform X1
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121363212 (TAF1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pruf01001
]
121363212 (TAF1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pruf03021
]
121363212 (TAF1)
03036 Chromosome and associated proteins [BR:
pruf03036
]
121363212 (TAF1)
Enzymes [BR:
pruf01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
121363212 (TAF1)
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
121363212 (TAF1)
Protein kinases [BR:
pruf01001
]
Serine/threonine kinases: Other
TAF1 family
121363212 (TAF1)
Transcription machinery [BR:
pruf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
121363212 (TAF1)
Chromosome and associated proteins [BR:
pruf03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
121363212 (TAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3591
Bromodomain
TBP-binding
zf-CCHC_6
Cac1_C
Ribosomal_L44
zinc_ribbon_12
Motif
Other DBs
NCBI-GeneID:
121363212
NCBI-ProteinID:
XP_041341284
LinkDB
All DBs
Position
Unknown
AA seq
1900 aa
AA seq
DB search
MSDSESEEEADGGRAEPFSLAGFLFGNINEAGQLEGDSVLDKESKKHLAGLGVLGLGNLI
TEITASEEDSAESEGAHLDEEGWVKSTEDAVDYSDITEVAEDESRRYKQAMGSLQPARRP
DEDEDDYDADCEDIDSKLMPPPPPPPVPGKKEDEKDAAATGIMQRDATKQLPSVTELFPE
FRPGKVLRFLRLFGPGKNVPSVWRSARRKRKKKHRELAQEVQIQEGEVVVESGVEGKSPW
EYEFAAPPPPEQCLSDDEITMMAPVESKFSQSTGDTDKVTDTKPKVAEWRYGPAQLWYDM
LGIPEDGSGFDYGFKLKEKNEEEEAKGHTEEGDAESSKEKDDLLADEHFLMVTQLQWEDD
VIWNGEDVKHKGTKTQRASLAGWLPSSMTRNATAYNAQQGLNRSGSLLNSPLPLAQKPNV
AGVLGIAKCKEKAPEQQVSLDEDKPWYSIFPIDNEELVYGRWEDNIIWDDQAMETYLDPP
VLTLDPNDENIILEIPDEKEEMTLNSPSKENKKESSLKKSRILLGKTGVIKEEPQQNMSQ
PEVKDPWNLSNDEFYYPKQQGLRGTFGGNIIQHSIPAVELRQPFFPTHMGPMKLRQFHRP
PLKKYSFGALSQPGPHAVQPLLKHIKKKAKMREQERQASGGGEMFFMRTPQDLTGKDGDL
ILAEYSEENAPLMMQVGMATKIKNYYKRKPGKDPGAPDCKYGETVYCHTSPFLGSLHPGQ
LLQAFENNLFRAPIYLHKMPETDFLIIRTRQGYYIRELVDIFVVGQECPLYEVPGPNSKR
ANTHIRDFLQVFIYRLFWKSRDRPRRIRMEDIKKAFPSHSESSIRKRLKLCADFKRTGMD
SNWWVLKPDFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRLKDAGYGEKSFFAPEEENEED
FQMKIDDEVRTAPWNTTRAFIAAMKGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQKDD
KEPQPVKKTVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQAR
SGEGPMSKFARGSRFSVAEHQERYKEECQRIFDLQNKVLESTEILSTDTDSSSAEDSDFE
EMGKNIENMLQNKKTSSQLSREREEQERKELQRMLLGEDNDKDRGKKDRRDKKGLSSAAS
ANSHKDDDTASVTSLNSSATGRRLKIYRTFRDEDGKEYVRCETVRKPAVIDAYCRIRTTK
DEEFIRKFALFDEQHREEMRKERRRIQEQLRRLKRNQEKEKLKGPPEKKPKKMKERPDLK
LKCGACGAIGHMRTNKFCPLYYQTNAPPSNPVAMTEEQEEELEKTVIHNDNEELIKVEGT
KIVLGKQLIESADEVRRKSLVLKFPKQQLPPKKKRRVGTTVHCDYLNRPHKSIHRRRTDP
MVTLSSILEGIINDIRDLPNTYPFHTPVNPKVVKDYYKIITRPMDLQTLRENVRKRQYPS
REEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKEDKLARLEKAINPLLDD
DDQVAFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPDYYKVIANPMDLETIRKNISKHK
YQNRETFLDDVNLILANSIKYNGSDSQYTKTAQEIVNICYQTLAEYDEHLTQLERDISTA
KEAALEEADLESLDPMTPGPYTPQPPDLYDTSTSLSVSHGASFYQDESNLSAMDTPITTT
GKRGTQMRQGRGRLGEEDSDVDIEGFDEDDDGKPKTPAPEVEDADGDLADEEEGSAQQPQ
ASVLYEDLLMSDGEDDDDGSDEEGDNPFSSIQLSESGSDSDVEPNAVRPKQPHVLQENTR
MGMDNEESMMSYEGDGGETSHVMEDSNISYGSYEEPDPKSNTRDTSFSSIGGYEISEEEE
EEEQQRSGPSVLSQVHLSEDEEDSEDFHSIAGDSDLDSDE
NT seq
5703 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactcggagagcgaggaggaggcggatggcggccgcgccgagcccttctccctg
gccggcttcctcttcggcaacatcaatgaggcggggcagctggaaggggacagcgtcctc
gacaaggaatccaagaagcacctggccgggctgggcgtgctggggctgggcaacctcatc
accgagatcaccgccagcgaggaggacagcgccgagagcgagggagcgcacctggacgag
gaaggctgggttaagagcacagaggatgctgttgattactcagacatcactgaagtggca
gaggatgagagccgtcggtacaagcaggcgatgggcagcctgcagccagcccgaaggcca
gatgaagatgaggatgattatgatgctgactgtgaagacattgattccaagctgatgcca
ccaccaccaccccctccagtacctggaaaaaaagaagatgaaaaggatgcagctgccact
ggaatcatgcagcgagatgctaccaaacagttgccaagtgttacagagctcttcccagaa
tttcgaccaggcaaggtgctgcgtttcctgcgtctctttggccctgggaagaacgttccg
tcggtctggcgaagtgcccggaggaagcgcaagaagaagcaccgggagctggcacaggaa
gtgcagatacaggagggtgaagttgtggttgagagtggagtggaaggaaaatctccttgg
gagtatgagtttgctgctcctccccctcctgagcagtgcctttcagacgatgagattacc
atgatggcacctgtggagtcgaaattttcccagtccactggtgacacagacaaggtgaca
gacaccaagcccaaggtggccgagtggcgctacggccctgcccagctctggtacgacatg
ctgggcatccccgaagacggcagtggcttcgattatggcttcaagctgaaggagaagaac
gaggaggaggaggctaaaggacacacagaggagggggatgcagaatcatcgaaggagaag
gatgatctgctagctgatgagcatttcctcatggtgacacagctccagtgggaggatgat
gtcatctggaatggggaggatgtcaagcacaaagggactaagacgcagcgtgccagcttg
gcaggctggctgccgtccagcatgaccagaaatgccactgcctacaatgcccagcaaggt
ttgaaccgcagtggctctttgctcaattcaccacttcctctagcacagaaacccaatgtg
gcaggagtcctgggcatagcaaagtgcaaggaaaaggcccctgaacagcaagtttccctg
gatgaagacaagccctggtactccattttcccaattgataatgaagagttagtgtatggc
cgttgggaagacaatatcatctgggatgatcaggcaatggaaacctacttggatccccct
gtcttaacacttgatccaaatgatgaaaacataattctagaaattcctgatgaaaaggaa
gagatgactttgaactctccatccaaggagaacaagaaagaatcttctctaaagaagagt
cggatcctgttgggaaaaacaggtgtcatcaaggaagagccacagcagaacatgtctcag
ccagaggtgaaggatccctggaacctctccaatgatgagttttactaccccaaacagcag
ggacttcgaggaacctttggaggcaacatcatccagcactccatcccagcagtggagctc
cgccagccgttctttcccacccacatgggtcccatgaagctccgacaattccatcggcct
cccctgaagaaatattcctttggtgccttgtcccagcccgggccccacgctgtgcagcct
ctgctgaagcacatcaagaagaaagccaagatgagggagcaggagcggcaggcctcgggc
gggggggagatgttcttcatgcgcacgccgcaggacctcactggcaaggatggagacctc
atcctggctgagtacagtgaggagaacgcccctctgatgatgcaggttggcatggcaaca
aagattaaaaattactacaagaggaaacctggcaaagatccaggagctccagactgtaaa
tatggagagactgtttattgtcacacttctcccttcctgggttctctgcatccaggccag
ttactgcaggcatttgaaaacaatcttttccgggcccccatctatttacataagatgcct
gaaacagatttcctgatcatccggacacgacaaggctactacattcgagagctggtggat
atttttgtagttggacaggagtgcccactctatgaagtacctggtcccaactctaagcga
gctaacacacatatcagagacttcctgcaggtttttatctaccggctcttctggaagagc
agggaccgtccgcgcaggatccgcatggaggacatcaagaaggcctttccctcccactcc
gagagcagcatccgcaagcgcctgaagctctgcgctgatttcaaacgcacagggatggac
tcaaactggtgggttttaaagccggatttcaggttgccaacagaggaggagatcagagcc
atggtgtccccagagcagtgctgtgcctattacagcatgatcgcggccgagcagcggctc
aaggatgcaggttatggggagaaatccttctttgctccagaagaggagaatgaagaggat
ttccaaatgaagattgatgatgaggtgcgcacggctccctggaacaccacacgagccttc
attgctgctatgaagggcaagtgcctcctagaagtgactggtgttgcagatcccactggt
tgtggggaaggattttcttatgtcaagattccaaacaaaccaacccagcagaaggacgat
aaagagcctcagccagtgaagaagacagtgactggcacagatgcagatctgcgccggctt
tccctcaaaaatgccaaacagcttctgcggaaatttggagtgcctgaggaggagatcaag
aagctgtcccggtgggaggtgattgacgtggtccgtacgatgtccacagagcaggcacgc
tcaggggaagggcctatgagcaaatttgcccgcggctctcggttctctgtggcagaacat
caggagagatacaaagaagagtgtcagcgcatcttcgacttacaaaataaggtgctggaa
tccactgagatcctgtcaacagacacagatagcagttcagctgaagacagtgactttgaa
gagatgggaaagaatattgagaatatgttacagaacaagaaaactagttctcagctctct
cgggaaagagaagagcaggaacggaaggaattgcaaaggatgctcctgggagaagacaat
gacaaagataggggcaaaaaggacaggagagacaaaaaggggctgtcttcagcagcctca
gcaaactctcacaaggatgatgacactgcctctgtgaccagcctgaattcctctgccacc
ggccggcgcctgaagatctaccgcacgttcagggacgaggacggcaaggagtacgtgagg
tgtgagacggtgcggaaacccgcagtcatcgacgcctactgccgcatacggaccaccaag
gacgaggagttcatacggaagtttgctctgtttgatgagcagcaccgtgaggagatgcgg
aaggagcggcgcaggatccaggaacagttacggaggctaaagcggaaccaagagaaagag
aaactcaaggggcctccagaaaagaagcccaagaaaatgaaagagcgtccagacttgaaa
ctcaaatgtggagcatgtggtgcaattggacacatgaggactaataagttctgccctctt
tactaccaaacaaatgccccaccttctaatcctgttgcaatgacagaggaacaggaggaa
gagctggaaaaaacagttattcacaatgacaatgaagaactcatcaaagttgaaggaaca
aaaattgtcctgggaaaacaactgattgagagtgctgatgaggttcgcaggaaatctctg
gtgctgaagtttcctaagcagcagcttcctccaaagaagaagcgtcgcgtggggacaacg
gtgcactgtgattatctcaaccgtccccataaatccatccaccggcggagaacagatccc
atggtgacactctcatccatcttggagggcatcatcaatgacatcagggatcttcccaat
acatacccctttcacacgcctgtaaatccaaaagttgtcaaagattattacaagatcatt
acccggcccatggatttacagaccctgcgtgaaaacgtccggaagaggcagtacccatcc
cgggaggagttcagggaacacctggagctcattgtgaagaacagtgccacatacaatggg
ccaaagcactcactgacacagatatcccagtccatgcttgacctgtgtgatgaaaagcta
aaagagaaggaagataaactggctcgattagaaaaagcaattaatcctctcctggatgat
gacgatcaagtggccttttccttcattttggataacattgtgactcaaaagatgatggca
gttccagattcttggccatttcaccatccagttaacaaaaagtttgttcctgattattac
aaggtgattgctaatccgatggacctggagaccatccgcaagaatatctccaaacacaaa
taccagaacagggagactttcctggatgatgttaacctcatccttgccaacagcattaag
tacaatgggtcagacagccagtacacaaaaacagcccaggagattgtaaacatctgttac
cagactttagctgagtatgatgagcacctgactcaactcgagagagacatctctactgct
aaggaagcagcactggaggaggcagatctggaaagtcttgatcctatgacccctggtccc
tacactccacagccaccagatttgtatgataccagcacttccctcagtgtgtcccatggt
gcttcattctatcaagatgaaagcaatttgtctgctatggacactcccatcactaccaca
gggaagcgaggaactcagatgcgccaggggcgaggtcggctgggcgaggaagactctgat
gtggatattgaaggatttgatgaggatgatgatggcaagcctaagactccagccccagag
gttgaagatgcagatggtgaccttgctgatgaagaagaaggatcagcccagcagccccag
gccagtgtcctctatgaagacttgcttatgtctgatggagaggatgatgatgatgggagt
gatgaagagggagataatcctttctcgtctatccagctgagtgagagtggcagtgactca
gacgtggagcccaatgcagtgagacccaaacagcctcatgttctccaagagaacacacgc
atgggcatggacaatgaagaaagcatgatgtcctatgaaggagatggtggggagacatct
catgttatggaggacagcaatatcagttatggcagctatgaagaaccagatccaaagtcc
aacacaagagacacgagtttcagcagcattggaggctatgagatctcagaagaggaagag
gaggaagagcagcagcgctctgggccaagtgtgttaagtcaggtccatctgtctgaggat
gaggaggacagtgaggacttccactccattgcaggagacagtgacctggactcagatgaa
tga
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integrated database retrieval system
