Pyrgilauda ruficollis (rufous-necked snowfinch): 121363855
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Entry
121363855 CDS
T07608
Symbol
GRIN2C
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04020
Calcium signaling pathway
pruf04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
121363855 (GRIN2C)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121363855 (GRIN2C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pruf04040
]
121363855 (GRIN2C)
Ion channels [BR:
pruf04040
]
Ligand-gated channels
Glutamate (ionotropic)
121363855 (GRIN2C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
NMDAR2_C
Motif
Other DBs
NCBI-GeneID:
121363855
NCBI-ProteinID:
XP_041342518
LinkDB
All DBs
Position
Unknown
AA seq
1348 aa
AA seq
DB search
MRGAVSCAGRDTLVDMGRAPAHALLLSMVLGCSAAFTDILLPGPEEPVVNVAVVFGGTSY
PLHIRSRLSPQSFLDMPLEIHPITVVVNNTNPSTLLTQICDILAGHKIHGIVFEDNVGTE
AVAQILDFISSQTQVPIISISGGSAVVLTPKEPGSAFLQLGVSIEQQIQVIFKVLEEYDW
GSFAVITSLYPGYNIFLDVIRSFTDASYFGWELQEVLTFEMSQEQSSSRTQRLLRQIDAQ
VLLVYCSREEAEYLFSMAEQAGLVGPGYIWIVPSMTVGNMEVPPSSFPVGLISVVTESWK
LSLRQKVRDGVAIIAMGAASFFRAHGYLPEVGQDCWTPTRATATNTSFYRHLLNVTWEHR
DFSFNEGGYLVKPTMVVITLNQHRLWEMVGKWEKGIIHMKYPVWPRYGSFMQPVVDNRHL
TVATLEERPFVIVENTDPSTGVCVRNTVPCRKQTNSSQSGDGLVDPYTKLCCKGFCIDIL
KKLAKAVKFSYDLYLVTNGKHGKIVRGVWNGMIGEVYYKRADMAIGSLTINEERSEIVDF
SVPFVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFVFEYFSPVGY
NQNLTSGKRPGGPSFTIGKSVWLLWALVFNNSVPIENPKGTTSKIMVLIWAFFAVIFLAS
YTANLAAFMIQEQYIDTVSGLSDRKFQRPQEQYPPFRFGTVPNGSTERNIRSNYPDMHTH
MVKYNQRSVEDALTSLKMGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIA
LQKDSRWKRAIDLALLQFLGDGETQKLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYML
LVAMGLSLLVFAWEHLVYWKLRHSVPKSHKLDFLLAISRGIYSCFNGVQTLSSPGRAPTP
DVTASSAQANVLKMLQAAKEMVTTASVGGSLEQATRTIEDWSNHSERLQTTFSLRTPQLV
VQNSTGAHRGPPSGPHPAERLGRAHAPKGAPLGLPLPQPVPVDSRLHGEENWRGENEHPH
LLHPLKFRGGCVGDEAVTGFPHLLVKTSPGGDYGEQMLVGNHVGAPLPPPTFPRDLPPPD
IYREHKRPSGRGDRLQNNPLLQRDGTHGGSGTLPRLLSAAEKKREVGSAFLPPSCPRGAF
PKVTRTCRARGEPARPEAAVMEREKLSRWASSARAPGERGEKRRPAGLRRCGGPRPAARA
DVPDLFPEAEAGYGCGSRCPQAAGRLPPRSPVTRLPSYREACRQNPRAAFTVPACAPHAC
MNSYSNLPLYARHLSRGSAPPREHPGVHPCDRGSGRWDGACRDCGRRGELALLRAVAADR
RDPLVARGVASPCAGGSWRRVSSLESEV
NT seq
4047 nt
NT seq
+upstream
nt +downstream
nt
atgcgaggggctgtgtcctgtgctggcagggacacgctggtggacatgggcagagcgccg
gcgcacgctctgctactgtcgatggtgctgggctgctcggctgccttcacggacatcctg
ctgccgggccccgaggagccggtggtcaacgtggccgtggtgtttgggggcacgtcctac
cctctgcacatccgctcccgcctgagcccccagagcttcctggacatgcccctggagatc
catcccatcactgttgtcgtcaacaacaccaaccccagcaccctcctcacccagatttgc
gacatcctcgccggccacaagatccacggcatcgtctttgaagacaacgtgggcacggag
gccgtggcccagatccttgacttcatctcctcccagacccaggtccccatcatcagcatc
agtggcgggtctgcagtggtcctgaccccaaaggagcccggatcagctttcctgcagttg
ggtgtctccatcgagcagcaaatccaggtgatcttcaaggtgctggaggaatacgactgg
ggctcctttgctgtcatcaccagcctctacccaggctacaacatcttcctggatgtcatc
cgctccttcacagatgccagctactttggctgggagctgcaagaggtgctcacctttgag
atgagccaggagcagagcagctccaggacgcagcggctcttgcgccagattgatgcccag
gtcctcctcgtttactgctcccgagaggaggccgagtatctcttctccatggcagaacaa
gccgggcttgtggggccaggatacatctggattgtgcccagcatgacagtgggcaacatg
gaggtgccaccctcctccttcccggtcggcctcatcagcgtggtgacggagagctggaag
ctgagcctgcggcagaaggtgcgggacggcgtggccatcattgccatgggggcagccagc
ttcttccgtgcccatggctacctcccagaggtggggcaggactgctggacccccaccagg
gccactgccaccaacacaagcttctaccggcaccttctcaatgtgacatgggagcacagg
gacttctccttcaatgaaggtggctacctggtcaagcccaccatggtggtgatcacgctc
aaccagcaccggctctgggagatggtgggcaagtgggagaaaggcatcatccacatgaag
tacccggtgtggccccgctacggctccttcatgcagcctgtggttgacaaccgccacctg
acagtggccacgctggaggagagaccctttgtcatcgtggagaacacggaccccagcacg
ggggtctgcgtgcgcaacaccgtgccctgccgcaagcagaccaactcctcccagagtggt
gatggccttgtggatccctacaccaagctgtgctgcaaagggttctgcatcgacatcctg
aagaagctggccaaggcagtgaagttctcctacgacctctacctggtgaccaatggcaaa
cacggcaagatcgtccgtggcgtctggaacggcatgattggtgaggtgtactacaagcgt
gcagacatggccatcggctccctcaccatcaatgaggagcggtctgagattgtggatttc
tccgtgccctttgtggagacaggcatcagcgtcatggtggcccggagtaacggcaccgtg
tccccctccgctttcctggagccttatagcccagctgtgtgggtcatgatgtttgtcatg
tgcctcactgtggtggccatcaccgtcttcgtgtttgagtatttcagccccgttggctac
aaccagaacctcaccagcggcaagaggccgggaggtccctccttcaccatcggcaagtcc
gtgtggttgctgtgggctctggtcttcaacaactcagtccccatcgagaaccccaagggc
accaccagcaagatcatggtgctcatctgggccttcttcgctgtcatcttcctcgccagc
tacacagccaacctggctgccttcatgatccaggagcagtacatcgacactgtgtcaggg
ctgagtgacaggaagttccagaggccgcaggagcagtatccacccttccgcttcggcacc
gtccccaacggcagcaccgagaggaacatccgcagcaactaccccgacatgcacacccac
atggtgaagtacaaccagcgctctgtggaggatgccctcaccagcctcaaaatggggaag
ctggatgccttcatctacgacgcagcggtgctcaactacatggcaggcaaggacgagggc
tgcaagctggtgaccatcggcagcgggaaggtgtttgccaccacgggctacggcatcgcc
ctgcagaaggactcgcgctggaagcgggccattgacctggccctgctgcagttcctggga
gatggtgagactcagaagctggagaccgtttggctgtcagggatctgccagaatgagaag
aatgaggtgatgagcagcaagctggacattgacaacatggctggggttttctacatgctg
ctggtggccatggggctgagcctgctggtcttcgcttgggagcacctcgtctactggaag
ctgcgtcattccgtccccaagtcccacaagcttgacttcctcctggccatcagcaggggc
atctacagctgcttcaatggggtgcagaccctgtcaagtcccgggcgggcacccacaccc
gatgtcactgccagctcagcccaggctaatgtgctgaaaatgctgcaggcggccaaagag
atggtgacaacggccagcgtgggcggctcactggagcaggccacccgcaccattgaggac
tggagcaaccacagtgagcgcctccagaccaccttctccctgaggacaccccagctcgtg
gtgcagaacagcaccggcgcacaccgcggccccccctccggcccgcaccccgccgagagg
ctggggagagcccacgctcccaagggcgctcccctggggctgccgctgccccagcccgtc
cccgtggactcccgtctgcacggggaggagaactggagaggggaaaacgagcacccccac
ctgctacaccccctgaagtttcgcggtggctgtgtaggggatgaagctgtcacaggtttc
ccccacctcctggtgaagacttccccaggaggggattatggggagcaaatgctggtgggg
aaccatgtcggggctcccctcccgccccccacgttccccagagacctcccaccaccggac
atctacagggagcacaagcggccgtcgggacggggggaccggctgcaaaacaaccccttg
ctccagagggacgggacacacgggggctcagggactctgccccggctgctctcggcagcg
gagaagaagcgggaggtgggcagcgccttcctgcctccatcctgccctcgcggagctttc
ccgaaagtcaccaggacttgcagagccaggggcgagccggcgcggccggaggcggcggtg
atggagcgggagaagctgagccggtgggcgagctcggcccgggcgcccggggagcgcggc
gagaagcggcggccggcggggctgcggcgctgcgggggcccccgcccggccgcccgcgcc
gacgtgcccgacctcttccccgaagccgaggccggctacggctgcggctcccgctgcccg
caggccgctggccggctgccaccgcgctcgcccgtgaccaggctgccgtcctaccgggag
gcttgccggcaaaaccctcgtgccgccttcaccgtgccggcgtgcgctccccacgcctgc
atgaactcgtactccaacctgcccctctacgcgagacacctctcgcgggggtccgccccg
ccccgggagcaccccggggtgcacccctgtgaccgggggtccgggcgctgggacggcgcc
tgcagagactgtggcaggcgcggggagctggccttgctgcgggcggtggcggcggacagg
agggacccgctggtggcccgcggggtggcgagtccctgcgccggcgggtcctggcggcgg
gtctccagcctggagtcggaggtgtga
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