Pyrgilauda ruficollis (rufous-necked snowfinch): 121365745
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Entry
121365745 CDS
T07608
Symbol
TRDMT1
Name
(RefSeq) tRNA (cytosine(38)-C(5))-methyltransferase isoform X1
KO
K15336
tRNA (cytosine38-C5)-methyltransferase [EC:
2.1.1.204
]
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pruf03016
]
121365745 (TRDMT1)
Enzymes [BR:
pruf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.204 tRNA (cytosine38-C5)-methyltransferase
121365745 (TRDMT1)
Transfer RNA biogenesis [BR:
pruf03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
121365745 (TRDMT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_methylase
MTS
Motif
Other DBs
NCBI-GeneID:
121365745
NCBI-ProteinID:
XP_041346114
LinkDB
All DBs
Position
Unknown
AA seq
400 aa
AA seq
DB search
MAALRVLELYSGIGGMHQALRESCTYAEVVAAVDVNTLANDVYKHNFPSTPLWAKTIEGI
TLEEFDRLSFDMILMSPPCQPFTRIGRQGDVSDPRTKSFLYILDILPRLQKLPKYLLLEN
VKGFESSSARNELLQTLATCGFKYQEFLLSPTCLGIPNSRLRYFLIAKLHQEPFSFQAPG
QILTRFPDQDPADLLKEKGADKVGETSSFLSSEEKNLDPNTGPDCSSKKSLPKGAFLFKL
ETVEEMERKHNQDNDSSIQMLKDFLEEENEEISQYFLPPKSLLRYALLLDIVKPTCRRST
CFTKGYGHYVEGTGSVLQTAVDVQLESVFKHIDKLSEEEKLMKLSTLKLRYFTPREIANL
HGFPLEFGFPEKVTVKQCYRLLGNSLNVHVVAKLISILLE
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctgcgggtgctggagctgtacagcggcatcgggggcatgcaccaggccctc
agagaaagctgcacatatgcagaagtggtagctgctgttgatgtgaacactcttgccaat
gatgtttataagcacaactttcccagcacgccgttatgggcaaagactatcgagggcata
acactggaagaatttgacagattatcttttgatatgattttgatgagtcctccctgtcag
ccttttacaagaattggccggcaaggtgacgtgtccgatccacggactaagagctttctc
tatatccttgatattctcccaaggcttcaaaagcttccaaaatacctacttttagaaaat
gttaaaggatttgaatcctcttctgcaagaaacgaacttttgcaaacactagcaacatgt
ggatttaaatatcaggaatttctcttgtctccaacctgtcttggcattcccaattccagg
ctgcggtattttctaattgcaaagcttcaccaagaaccattttcctttcaagctcctgga
caaatattgacaagattcccagatcaggatccagcagatttactcaaggaaaaaggtgcc
gacaaagtgggtgaaactagttcttttttgtcctctgaggagaagaatctggatccaaac
actggtccagattgcagcagcaagaagagtttaccaaaaggggcctttctatttaagctt
gaaacagtagaagagatggaaaggaaacataatcaggataatgattcctctattcaaatg
ctaaaagacttcttggaagaggaaaatgaagaaataagtcaatatttcttaccaccaaaa
tccttactgcgctatgctctcttgttagacattgtcaaacccacctgccggagatccacg
tgctttacaaaagggtatggacactatgtcgaagggaccggctcagttctgcagacagca
gtagatgtacagcttgaatctgtgtttaaacacattgacaagttgtcggaagaagagaag
cttatgaaattgtcaacactaaaactgaggtactttactccaagagaaatagcaaatctt
catggattccctttggaatttggttttcctgaaaaggtaacagtgaagcaatgctatcgt
cttctgggaaacagcctcaacgtacatgtggtggcaaaattgatctccattctacttgaa
taa
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