Pseudomonas rhodesiae: HRH33_21220
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Entry
HRH33_21220 CDS
T07097
Name
(GenBank) EAL domain-containing protein
KO
K21024
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
prx
Pseudomonas rhodesiae
Pathway
prx02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
prx00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HRH33_21220
Enzymes [BR:
prx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
HRH33_21220
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
dnstrm_HI1420
Motif
Other DBs
NCBI-ProteinID:
QKJ74987
LinkDB
All DBs
Position
4690642..4692693
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AA seq
683 aa
AA seq
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MKLELKNSLSVKLLRVVLLSALVVGVALSVAQIVYDAYKTRQAVASDAQRILDMFRDPST
QAVYSLDREMGMQVIEGLFQDDAVRMASIGHPNETMLAEKSRALQHAPSRWLTDLILGQE
RTFTTPLVGKGPYSEYYGDLSITLDTATYGEGFIVNSVIIFISGVLRALAMGLVLYLVYH
WLLTKPLSRIIEHLTSVNPDRPSEHKIPQLKGHERNELGLWINTANQLLESIERNTHLRH
EAESSLLRMAQYDFLTGLPNRQKLQEQLDKILIDAGRRQRRVAVLCVGLDDFKSVNEQFT
YQAGDKLLLALADRLRAHSGRLGALARLGGDQFALVQADIDQPYEAAELAQSILDDLEAE
FAFEHEQIRLRATIGITLFPEDGDSTEKLLQKAEQTMTLAKSRSRNRYQFYIASVDSEMR
RRRELEKDLRDALSREQFHLVYQPQVSYREQRVVGVEALLRWQHPEHGLVPPDLFIPLAE
QNGTIIPIGEWVLDHACRQLREWHDQGFTQLRMAVNLSTVQLHHAELPRVVNNLMQIYRL
PPRSLELEVTETGLMEDISTAAQHLLSLRRSGALIAIDDFGTGYSSLSYLKSLPLDKIKI
DKSFVQDLLDDDDDATIVRAIIQLGKSLGMQVIAEGVETAEQEAYIIAEGCHEGQGYYYS
KPLPARELAVFLKQVERNNAAIL
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
ttgaagctggaactcaagaacagcttgtcggtgaagttgctacgggttgtgctgctgtcg
gcgttggtcgtgggcgtggcgctgagcgtggcgcagatcgtgtatgacgcctacaagacg
cgccaggccgtggccagcgatgcccagcgtatcctcgatatgtttcgcgacccctctacg
caggccgtgtatagcctggaccgcgagatgggcatgcaggtgatcgaggggctgtttcag
gacgacgcggtgcgcatggcctccatcggccatcccaacgaaaccatgttggcggaaaaa
agccgcgcgttgcagcatgccccaagccgctggctgaccgacctcattcttggccaggaa
cgcaccttcaccacgcccctggtgggcaagggcccttacagtgagtactacggcgatctg
agcatcaccctcgacaccgccacctacggtgagggatttatcgtcaattcagtgattatt
ttcatttccggggtgctgcgcgcattggccatggggctggtgctgtatctggtctatcac
tggttgctgaccaaaccgctgtcgcggattatcgagcacctgacatccgtcaacccggac
cggcccagcgaacacaaaatcccacagctcaagggccacgaacgcaacgaactggggttg
tggatcaataccgccaatcagttgctcgaatccatcgaacgcaacacccacctgcgccac
gaagccgaatccagcctgctgcgcatggctcagtatgactttctcaccggcctgccgaac
cgccagaaactgcaggagcagctggacaaaatcctgatcgacgccggccgtcgtcagcgc
cgtgtcgcggtgctgtgtgtggggctggacgattttaaaagcgtcaatgagcagttcact
taccaggccggcgacaaattgctcctggccctggccgaccgcctgcgcgcccacagcggc
cggctcggcgccctggcccgcctggggggcgatcagttcgccctggtgcaggccgatatc
gaccagccctacgaggccgccgaactggcgcaaagcatcttggatgacctcgaagcggaa
tttgccttcgagcacgaacaaatccgtctgcgcgccactatcggtatcacgctgttccct
gaagatggcgacagcacggagaagttgcttcaaaaagccgagcagaccatgaccctggcc
aagagccgttcacgcaaccgttaccagttctatatcgccagcgtcgacagcgaaatgcgc
cggcgccgcgagctggaaaaagacctgcgcgacgccctgagccgcgagcagtttcacttg
gtgtatcagccgcaggtcagctatcgcgaacaacgggtggtcggcgtcgaagccttgctg
cgctggcagcaccccgagcatggcctggtaccgccggacctgttcatccccctggccgag
cagaacggcaccattattcccattggcgaatgggtgctggatcacgcctgccggcaattg
cgcgaatggcatgaccagggcttcacccaactgcgcatggcggtcaacctctcgacggtg
cagctgcaccacgccgagctgccacgggtggtaaacaatctgatgcaaatctaccgcctg
ccgccacgtagccttgagctggaggtcaccgagaccggcctgatggaagacatcagcacc
gccgcccagcacctgctgagcctgcggcgctccggtgccttgatcgctatcgatgacttc
ggcaccggttattcctccctgagttatctcaaaagcctgccgctggacaagatcaagatc
gacaagagcttcgtccaggacctgctggacgatgatgacgatgccaccatcgtgcgggcg
atcattcaactgggtaagagcctgggcatgcaggtgatcgccgagggggtggaaaccgcc
gagcaggaggcttatatcatcgccgagggctgccacgagggtcagggttactactacagc
aaacccctgccggcgcgggagttggcggtttttttgaagcaagtcgagcgcaataacgcg
gccattctttga
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