Pseudomonas salmasensis: HU731_022040
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Entry
HU731_022040 CDS
T07619
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
psam
Pseudomonas salmasensis
Brite
KEGG Orthology (KO) [BR:
psam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psam03009
]
HU731_022040 (rimO)
Enzymes [BR:
psam01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HU731_022040 (rimO)
Ribosome biogenesis [BR:
psam03009
]
Prokaryotic type
ribosomal protein modification factors
HU731_022040 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
DUF730
Motif
Other DBs
NCBI-ProteinID:
QXH81027
UniProt:
A0AA92RT42
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All DBs
Position
complement(4916647..4917975)
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AA seq
442 aa
AA seq
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MAKANPKVGFVSLGCPKALVDSERILTQLRMEGYDVVSTYQDADVVVVNTCGFIDSAKAE
SLEVIGEAIKENGKVIVTGCMGVEEGNIRNVHPSVLAVTGPQQYEQVVNAVHEVVPPRQD
HNPLIDLVPPQGIKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLDEAQRL
VKSGVKELLVISQDTSAYGVDVKYRTGFWNGAPVKTRMTELCEALSSLGVWVRLHYVYPY
PHVDELIPLMAAGKILPYLDIPFQHASPKVLKAMKRPAFEDKTLARIKNWREICPELIIR
STFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANLLDLAVVPDDVKQDRW
ERFMAHQQAISSARLQLRIGKEIEVLIDEVDEQGAVGRCFFDAPEIDGNVFIDDASGLKP
GDKVWCTVTDADEYDLWAEKRD
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atcgcaaaagccaaccccaaggttggctttgtttccctgggttgcccgaaggcgctggtc
gactccgagcgcatcctcacgcaattgcgtatggaaggctatgacgtcgtgtccacgtac
caggacgccgatgtggtggtggtcaacacctgcggcttcatcgactcggccaaagctgaa
tccctggaagtgatcggcgaagccatcaaggaaaacggcaaggtcatcgtgaccggctgc
atgggggtggaagaaggcaatatccgcaacgtgcacccgagtgtgctggccgtgaccggc
ccgcagcagtacgagcaggtggtcaacgctgtgcacgaggtggtgccgccacgccaggat
cacaacccgctgatcgacctggtgccgcctcaaggcatcaagctgaccccacgccactac
gcgtatctgaagatttccgaaggctgcaaccatagttgcagcttctgcatcatcccgtcg
atgcgtggcaaactggtgagccgcccggtgggtgacgtgctcgacgaggcccagcgcctg
gtcaagtctggcgtcaaggagctgctggtaatctcccaggacaccagcgcctacggcgtc
gatgtgaaataccgcaccggtttctggaacggcgcgccggtgaaaacccgcatgaccgaa
ctgtgcgaagccctcagcagcctgggcgtgtgggtgcgtctgcattatgtttacccgtac
ccgcacgtggacgagctgatcccgttgatggccgccggcaagatcctgccgtacctggac
atcccgttccagcacgccagcccgaaagtgctcaaggcgatgaaacgcccggcgttcgaa
gacaagaccctggcacgcatcaagaactggcgcgagatctgcccggagctgatcatccgt
tccaccttcatcgtcggtttccccggcgagaccgaagaagacttccagtacctgctggac
tggctgaccgaagcgcagctggaccgcgtcgggtgcttccagtactcgccggtggaaggt
gcgccggccaacctgctggacctggccgtggtgccggacgacgtcaagcaagaccgttgg
gagcgcttcatggcgcaccagcaggccatcagctcggcgcgcctgcaactgcgcatcggc
aaggaaatcgaagtgctcatcgatgaagtcgacgagcaaggcgcggtaggccgttgcttc
ttcgacgcccctgaaatcgacggtaacgtattcatcgacgatgccagcggcctgaagccg
ggtgacaaagtgtggtgcaccgtgaccgatgccgacgagtacgacttgtgggctgaaaag
cgcgactga
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