Pseudomonas savastanoi pv. savastanoi: PSA3335_26685
Help
Entry
PSA3335_26685 CDS
T07948
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
psav
Pseudomonas savastanoi pv. savastanoi
Pathway
psav00730
Thiamine metabolism
psav01100
Metabolic pathways
psav01240
Biosynthesis of cofactors
psav04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
psav00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
PSA3335_26685
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
PSA3335_26685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psav03016
]
PSA3335_26685
Enzymes [BR:
psav01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
PSA3335_26685
Transfer RNA biogenesis [BR:
psav03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
PSA3335_26685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
Rhodanese
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
ARD14315
LinkDB
All DBs
Position
complement(5828052..5829506)
Genome browser
AA seq
484 aa
AA seq
DB search
MKLIVKVFPEITIKSPPVRKKFIRQLGKNIRTVLREMDADIVVGGVWDNLEVETRQTDPK
VLQGIRDRLSCMPGIANFLQVAEYPLGDMDDIVAKCKLHYADLLPGKMFSVRCKRAGRHD
FSSMDVEKYVGSKLRMQCGAAGIELKKPDLVVRMEIRDQRLFVVHDQHQGMGGYPLGALE
QTLVLMSGGFDSTVAAYQIMRRGLMAHFCFFNLGGRAHELGVMEVAHFIWKKYGSSQRVL
FVSVPFEEVLGEILQKVDNSHMGVVLKRMMLRAASAVADRLEIDVLVTGEAISQVASQTL
PNLSLIDAATDKLVLRPLVASHKQDIVDLATEIGTADFARHMPEYCGVISVNPKTNAKRN
RVEYEEKQFDMAILEQALERAKLISIDRVIDDLSRNVDIEEVSQALAGQVIIDIRHPDAQ
EDQPLQVPGVEIQTLPFYALNSRFKALDDTRQYLLYCDKGVMSRLHAHHLLSEGHANVRV
YRPS
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaaactaatcgttaaagtttttccagaaatcaccattaaaagcccgccggtgcgcaag
aaattcatccggcaactgggcaagaacattcgtaccgtgctccgtgaaatggacgcggac
attgtcgtgggtggcgtatgggacaaccttgaggtggagacccgccagaccgaccccaaa
gtgcttcagggcatcagggaccggctaagttgcatgcccggcattgccaactttctgcag
gtggccgagtacccgttgggcgacatggatgacatcgttgccaagtgcaaactgcactac
gccgacctgctgcccggcaagatgttttcagtgcgttgcaagcgcgccggtcgccacgat
ttcagctcgatggatgtcgagaaatacgtcggtagcaagttgcgcatgcaatgcggtgct
gccggaatcgagctgaaaaagcccgatcttgtcgtacggatggaaattcgcgaccaacgg
ttgtttgtcgttcatgaccagcaccagggcatgggcggctacccgctgggtgcgctggag
cagaccctggtattgatgtccggcggtttcgattcgaccgttgcggcctaccagatcatg
cgccgcggccttatggcgcacttctgcttcttcaatctgggcggaagagcccatgaactg
ggcgtgatggaagtcgctcactttatctggaagaagtacggcagttcgcagcgggtgctg
tttgtcagcgtgccattcgaggaagttctcggagaaattctgcagaaagtcgataacagt
catatgggtgtagttttgaagcgtatgatgttacgcgctgcatccgccgtggctgatcgt
ctcgaaatcgacgtgctggtaactggcgaagcgatttcacaggttgccagccagacgctg
ccaaacctgtcgctgatcgacgcggctacagacaagctggtcctgcgaccgctggtcgcg
agccacaagcaagacatcgtggacctggcgactgaaataggcactgccgactttgcccgc
cacatgcctgagtattgcggggtgatttcggtcaacccgaagaccaacgccaagcgaaat
cgcgttgagtacgaagaaaaacagttcgacatggcgattctcgagcaagcgcttgaacgc
gcgaagctgatttcgatcgatcgggtgatcgacgatctgagccgcaatgtcgacatagaa
gaagtcagccaggcgctggccggtcaggtcatcatcgacatccgtcacccggatgcccag
gaggaccagccgctgcaagtgcctggcgtggagatacagacgttgccgttctacgcattg
aacagccgtttcaaggcactggatgacacgcgccagtaccttttgtattgcgacaaaggc
gtcatgagtcgcctgcatgctcaccatttgctcagtgaggggcatgccaatgtgcgcgtt
tatcgaccgagctaa
DBGET
integrated database retrieval system
