Pseudomonas syringae pv. syringae B728a: Psyr_3290
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Entry
Psyr_3290 CDS
T00246
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
psb
Pseudomonas syringae pv. syringae B728a
Pathway
psb00071
Fatty acid degradation
psb00280
Valine, leucine and isoleucine degradation
psb00310
Lysine degradation
psb00362
Benzoate degradation
psb00380
Tryptophan metabolism
psb00410
beta-Alanine metabolism
psb00640
Propanoate metabolism
psb00650
Butanoate metabolism
psb00907
Pinene, camphor and geraniol degradation
psb00930
Caprolactam degradation
psb01100
Metabolic pathways
psb01110
Biosynthesis of secondary metabolites
psb01120
Microbial metabolism in diverse environments
psb01200
Carbon metabolism
psb01212
Fatty acid metabolism
Module
psb_M00087
beta-Oxidation
psb_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
psb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
Psyr_3290
00650 Butanoate metabolism
Psyr_3290
09103 Lipid metabolism
00071 Fatty acid degradation
Psyr_3290
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Psyr_3290
00310 Lysine degradation
Psyr_3290
00380 Tryptophan metabolism
Psyr_3290
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Psyr_3290
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Psyr_3290
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Psyr_3290
00930 Caprolactam degradation
Psyr_3290
Enzymes [BR:
psb01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
Psyr_3290
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
Psyr_3290
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
Psyr_3290
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
Psyr_3290
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
AAY38322
UniProt:
Q4ZRA0
LinkDB
All DBs
Position
complement(3936776..3938941)
Genome browser
AA seq
721 aa
AA seq
DB search
MIYEGKAITVKALESGIVELNFDLKGESVNKFNRLTLNEFRQAVDAVKADASVKGVIVTS
GKDSFIVGADITEFVDNFKLPEAELVAGNLEANRIFSDFEDLNVPTVVAINGIALGGGLE
MCLAADYRVMASSARIGLPEVKLGLYPGFGGTVRLPRIIGADNAIEWIASGKENAAEDAL
KVGAVDAVVAPEKLQAAALDLIQRAISGEFDYKAKRQPKLDKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKMAKTPAAQSLIGLFLNDQEL
KKKARGYDKIAKDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDIREEAIQLGLNEASKL
LGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVEAVVENPKVKQAVLAEVEANVG
ENTILASNTSTISISLLAQALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSEEAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYDAKRLGQKNGKGFYAYETDKKGKP
KKVNDPAVLDVLKPIVYEQREVSDEDIVNWMMIPLCLETVRCLEDGIVETAAEADMGLIY
GIGFPPFRGGALRYIDSIGVAEFVALADQYAELGALYQPTAKLREMAANGQSFFGQASSE
E
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgaattg
aatttcgacctcaagggtgagtccgtcaacaagttcaaccgtctcaccctcaatgagttc
cgccaggcagtcgatgcggtcaaggccgacgcatcggtcaagggcgtgattgtcaccagt
ggcaaagattcattcattgtcggcgccgatatcaccgaattcgtcgacaacttcaagttg
ccggaagctgagctggtcgccggcaatctggaagcgaacaggattttcagtgatttcgaa
gacctgaacgtgccgactgtcgtggcaatcaacggtatcgcgctgggcggcggtctggaa
atgtgcctggccgcagactatcgagtcatggccagcagcgctcgtatcggtctgcccgag
gtcaagcttggcctgtacccgggtttcggcggcacagtccgtctgccacgcattatcggt
gccgacaacgcgatcgagtggattgcctcgggcaaggaaaacgccgcggaagacgctttg
aaggtcggtgccgtcgatgccgtggtagcgcctgaaaaattgcaggccgccgcccttgat
ctgatccagcgcgccatttccggcgagttcgattacaaggccaagcgtcagccgaagctg
gacaagctcaagctcaatgccatcgaacagatgatggcattcgaaaccgccaagggcttc
gttgcaggtcaggccggcccgaactatccggccccggtcgaagccatcaagaccatccag
aaagccgccaacttcggtcgtgacaaggcgctggagatcgaagccgccggtttcgtgaaa
atggccaagacccctgctgcgcagagtctgatcggcctgttcctgaacgatcaggagctg
aaaaagaaagccaggggctacgacaagattgccaaggacgtgaagcaggcggccgtactg
ggcgccgggatcatgggcggcggcattgcctatcagtcggcagtcaaaggtacgccgatc
ctgatgaaggatattcgcgaagaagccattcaactgggtctgaacgaagcgtccaaactg
ctgggtggtcgcctggagaaaggtcgtctgaccgcggcgaagatggccgaagcgcttaac
gccattcgtcctacgctgtcctacggcgatttcggcaatgtcgatctggtcgtcgaagct
gtcgtcgagaaccccaaggtcaagcaggcggtactggccgaagtcgaagccaacgtgggt
gaaaacaccattctggcgtccaacacctcgaccatctcgatcagcctgctggcccaggcc
ctcaagcgcccggaaaacttcgtcggcatgcacttcttcaacccggtacacatgatgccg
ctggtggaagtgatccgtggcgagaaatccagtgaagaagcggtcgcgacgaccgttgcc
tacgccaagaaaatgggcaagaacccgatcgtggtcaatgactgcccgggcttcctggtc
aaccgtgtgctgttcccgtatttcggtggtttcgccagactggtcagtgcgggcgtggat
ttcgtgcgcatcgacaaggtcatggaaaaattcggctggccgatgggccctgcctacctg
atggacgtggtcggtatcgacaccggccaccatggtcgtgatgtcatggccgaaggtttc
cctgatcgcatgaaagatgatcgccgctctgcgatcgatgccctgtacgacgccaagcgc
ctcgggcagaagaacggcaagggtttctacgcctacgaaacggacaagaagggcaagccc
aaaaaggtcaatgacccggccgtgctggacgtgctcaagccgattgtctacgagcagcgc
gaagtcagcgatgaagacatcgtcaactggatgatgatcccgctgtgcctggaaacggtc
cgctgcctggaagacggcattgtcgaaaccgctgccgaggctgacatgggcctgatctac
ggtatcggtttccctccgttccgtggcggcgcgctgcgctacatcgattccatcggtgtt
gccgaattcgttgccctggctgaccaatacgccgaactgggtgccctgtatcaaccgact
gcgaagctgcgtgagatggccgccaacggccagagcttcttcggtcaagcgtcttccgag
gaatga
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