Prevotella scopos: J4856_02535
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Entry
J4856_02535 CDS
T08373
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pscj
Prevotella scopos
Brite
KEGG Orthology (KO) [BR:
pscj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pscj03009
]
J4856_02535 (rimO)
Enzymes [BR:
pscj01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
J4856_02535 (rimO)
Ribosome biogenesis [BR:
pscj03009
]
Prokaryotic type
ribosomal protein modification factors
J4856_02535 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QUB44864
LinkDB
All DBs
Position
1:complement(683954..685255)
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AA seq
433 aa
AA seq
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MKKNQIDIVTMGCSKNLVDSELLMKQFEENGFHCTHDAERPQGEIAVINTCGFIETAKEE
SINTILEFINRKKNGQLNKLYVMGCLSQRYKDELEAELPEVDKFYGKFNYKQLLNELGKA
DVPACNGVRHLTTPRHYAYVKIAEGCDRHCAYCAIPLITGRHHSRPIEDVLEEVRRLVGQ
GVKEFQIIEQELTYYGVDLDGKHHITELISRMADIKGVEWIRLHYAYPNQFPLDLLDVIA
EKPNVCKYLDIAFQHISDHMLNRMRRHVSKQETLYLIAEIRRRVPGIHLRTTLLVGFPGE
TDEDFEELKDFVTKARFERMGAFSYSEEEGTYSANHYEDDVPEEVKQARLDELMAIQQGI
SEELEAEKVGKIFKVIIDRKEGEYYVGRTEFCSPEVDPEVLIPSKEMVLRVGNFYDVRIT
DSDEFDLFGEVVK
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaaatcagatagatattgtaaccatgggctgctcaaagaatcttgtagattca
gagctgctgatgaaacaattcgaagaaaatggctttcattgcacgcatgatgcagaacgt
ccgcaaggtgagattgcggttatcaatacatgcggttttatcgaaacagcaaaggaagaa
agcatcaatacgattcttgaatttattaatagaaagaaaaacggacagcttaataaactt
tatgttatgggctgtctttcgcaaagatataaagatgaacttgaagcagaactaccagaa
gtggataagttctatggaaaattcaattataagcaattactaaatgagctagggaaggct
gatgttcctgcatgtaatggcgttagacatctgacgacaccacggcattacgcctatgtg
aagattgctgaaggatgtgatcgtcattgtgcgtattgtgcaattccattgattacaggt
cgtcatcattcgcgtcctatagaggatgtgttggaagaagtgcgaagacttgtagggcaa
ggggtgaaagagtttcagattattgagcaagagttgacttactatggtgtagatctcgat
ggtaagcaccatatcactgaactaatctcaaggatggcagatattaaaggagtagaatgg
attcgccttcattatgcttatcccaaccaattcccccttgatcttctcgatgtaatcgca
gaaaaaccaaatgtttgtaaatatttagatattgcatttcagcatatttctgaccacatg
cttaatcgtatgcgtcgtcatgttagcaagcaagaaacgctttatttgatagctgaaata
cgtcgtcgtgttcctggcatacatcttcgcacaactcttcttgttggttttccaggagag
actgatgaggactttgaagagttaaaagactttgttactaaagcccgctttgaacgtatg
ggagccttttcttattctgaagaagaagggacctatagtgctaatcattacgaggatgat
gttccagaggaagtgaagcaggctcgtttggatgaattgatggctattcagcaaggaatc
tctgaggaattagaagccgaaaaggttggtaagatatttaaggttattattgatcgaaaa
gaaggtgagtactatgttggtcgaacagagttctgttcaccagaggttgacccagaagta
ctgattccatcgaaggagatggttttacgagttggtaacttctatgatgttcgtatcaca
gactccgatgaatttgatctttttggtgaggttgttaagtga
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