Mollisia scopiformis: LY89DRAFT_707611
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Entry
LY89DRAFT_707611 CDS
T04865
Name
(RefSeq) Clp1-domain-containing protein
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
psco
Mollisia scopiformis
Pathway
psco03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
psco00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
LY89DRAFT_707611
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psco03019
]
LY89DRAFT_707611
Enzymes [BR:
psco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
LY89DRAFT_707611
Messenger RNA biogenesis [BR:
psco03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
LY89DRAFT_707611
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_N
CLP1_P
Clp1
Dynamin_N
MMR_HSR1
AAA_16
SRP54
TniB
nSTAND3
SRPRB
ATP_bind_1
PduV-EutP
AAA_24
AAA
ATPase_2
AAA_21
Motif
Other DBs
NCBI-GeneID:
28827345
NCBI-ProteinID:
XP_018070628
JGI:
707611
UniProt:
A0A194X7Y2
LinkDB
All DBs
Position
Unknown
AA seq
459 aa
AA seq
DB search
MSIPGLGQAAPTAAFLAPIPVAPTVVHDLQANSEWRFEVDIGEKIDVKILSGTAEIFGTE
LAVNHLYTFRGAKSSIYTWHGCRIEVTGVCEEYTAEETPMTQYVNTHFALEKLRDEAERD
RREGPRVLVVGPTNSGKTSLVKLLAAYALRMGQQPMVINTDSREGLLSIPGSLTATPFAS
IIDVEQGWGSSPTSTSTPVPVKLPLCYYYGLGNPEDNTKLYKPIITRLALAATSRLTDDP
AIKSTGMIIDTPGVISQGKGGFDLISHIVSEFSVNTILVIGSERLHSEMLRRFSTYRTST
GETITLVKLDKSGGCVDRDDTFMQLTNEATVKEYFFGDTRTTLSPHTQSLGYDEVTVYKI
REAHTNSFLPGGVEETDHGLYEKVEPNASMQHCILAVMYASVSDSQDTIRDASVMGFVYV
AEVDETKRRLKVLAPMNTRMTDRPMIWGSWPEVAVSLMG
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattccaggtctggggcaagctgcgccaacggctgccttcttagcaccaatacct
gtagcaccgacagtagttcacgaccttcaagcaaattcagaatggcgctttgaagtcgat
attggggagaagatcgatgtgaagatcctctcggggactgcagagatcttcgggacagaa
cttgcagtaaaccacctctacacatttcgcggagccaagtcctcgatatacacatggcac
ggttgcagaattgaggttacgggggtatgcgaagagtacacagcggaagagacgcccatg
acacaatatgtcaacacccatttcgccttggagaagttacgagacgaagcagagagggac
cgtcgtgaaggtccaagggtactggtggttgggccaacgaattctgggaagactagtttg
gtgaagctcttagcggcatatgcattaagaatgggacaacagcctatggtcatcaatacc
gattcgagggaaggcttgttgtcaatacctggaagcttgactgcgacgccgtttgcttcg
attattgatgtggaacaaggttggggaagcagtcctacaagcacctctactccagtgcct
gtaaagttgccgttgtgctattactatggactgggtaatccggaagacaacacgaagttg
tacaagccaattatcactaggttggctttggcagctacaagcagactgacggacgatcca
gccatcaagtcgacaggcatgatcattgatactccaggggttataagtcaaggtaaaggt
gggtttgatctgatatcacatattgtatcagagttctcagtcaatactatacttgtgatc
ggctccgaaagattacacagcgaaatgcttcgacgtttctcgacgtaccgtacaagtaca
ggcgaaacaatcactcttgtgaagcttgacaaatcaggtggttgtgttgaccgagatgat
acgttcatgcaattgacgaatgaagctactgtcaaagagtatttctttggtgatacccgg
actacgctcagtccccatacgcaaagtcttggatacgatgaagtcacggtctacaagatc
agagaagcacataccaattcgttcttacctggtggagtcgaggagacggatcatggactc
tatgagaaagtggaacccaatgcctcaatgcagcactgcatacttgcagtaatgtatgca
tcagtatcagattctcaggatactattagggatgccagcgtcatgggctttgtgtacgta
gcagaagtggatgaaacaaaacgaagattgaaggtcctggcacccatgaatactagaatg
accgacagaccaatgatctggggcagttggcctgaagtggctgtaagtctcatgggctaa
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