KEGG   Mollisia scopiformis: LY89DRAFT_707611
Entry
LY89DRAFT_707611  CDS       T04865                                 
Name
(RefSeq) Clp1-domain-containing protein
  KO
K14399  polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]
Organism
psco  Mollisia scopiformis
Pathway
psco03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:psco00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    LY89DRAFT_707611
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psco03019]
    LY89DRAFT_707611
Enzymes [BR:psco01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     LY89DRAFT_707611
Messenger RNA biogenesis [BR:psco03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Pre-mRNA cleavage factor IIm (CFIIm)
     LY89DRAFT_707611
SSDB
Motif
Pfam: CLP1_N CLP1_P Clp1 Dynamin_N MMR_HSR1 AAA_16 SRP54 TniB nSTAND3 SRPRB ATP_bind_1 PduV-EutP AAA_24 AAA ATPase_2 AAA_21
Other DBs
NCBI-GeneID: 28827345
NCBI-ProteinID: XP_018070628
JGI: 707611
UniProt: A0A194X7Y2
LinkDB
Position
Unknown
AA seq 459 aa
MSIPGLGQAAPTAAFLAPIPVAPTVVHDLQANSEWRFEVDIGEKIDVKILSGTAEIFGTE
LAVNHLYTFRGAKSSIYTWHGCRIEVTGVCEEYTAEETPMTQYVNTHFALEKLRDEAERD
RREGPRVLVVGPTNSGKTSLVKLLAAYALRMGQQPMVINTDSREGLLSIPGSLTATPFAS
IIDVEQGWGSSPTSTSTPVPVKLPLCYYYGLGNPEDNTKLYKPIITRLALAATSRLTDDP
AIKSTGMIIDTPGVISQGKGGFDLISHIVSEFSVNTILVIGSERLHSEMLRRFSTYRTST
GETITLVKLDKSGGCVDRDDTFMQLTNEATVKEYFFGDTRTTLSPHTQSLGYDEVTVYKI
REAHTNSFLPGGVEETDHGLYEKVEPNASMQHCILAVMYASVSDSQDTIRDASVMGFVYV
AEVDETKRRLKVLAPMNTRMTDRPMIWGSWPEVAVSLMG
NT seq 1380 nt   +upstreamnt  +downstreamnt
atgtcgattccaggtctggggcaagctgcgccaacggctgccttcttagcaccaatacct
gtagcaccgacagtagttcacgaccttcaagcaaattcagaatggcgctttgaagtcgat
attggggagaagatcgatgtgaagatcctctcggggactgcagagatcttcgggacagaa
cttgcagtaaaccacctctacacatttcgcggagccaagtcctcgatatacacatggcac
ggttgcagaattgaggttacgggggtatgcgaagagtacacagcggaagagacgcccatg
acacaatatgtcaacacccatttcgccttggagaagttacgagacgaagcagagagggac
cgtcgtgaaggtccaagggtactggtggttgggccaacgaattctgggaagactagtttg
gtgaagctcttagcggcatatgcattaagaatgggacaacagcctatggtcatcaatacc
gattcgagggaaggcttgttgtcaatacctggaagcttgactgcgacgccgtttgcttcg
attattgatgtggaacaaggttggggaagcagtcctacaagcacctctactccagtgcct
gtaaagttgccgttgtgctattactatggactgggtaatccggaagacaacacgaagttg
tacaagccaattatcactaggttggctttggcagctacaagcagactgacggacgatcca
gccatcaagtcgacaggcatgatcattgatactccaggggttataagtcaaggtaaaggt
gggtttgatctgatatcacatattgtatcagagttctcagtcaatactatacttgtgatc
ggctccgaaagattacacagcgaaatgcttcgacgtttctcgacgtaccgtacaagtaca
ggcgaaacaatcactcttgtgaagcttgacaaatcaggtggttgtgttgaccgagatgat
acgttcatgcaattgacgaatgaagctactgtcaaagagtatttctttggtgatacccgg
actacgctcagtccccatacgcaaagtcttggatacgatgaagtcacggtctacaagatc
agagaagcacataccaattcgttcttacctggtggagtcgaggagacggatcatggactc
tatgagaaagtggaacccaatgcctcaatgcagcactgcatacttgcagtaatgtatgca
tcagtatcagattctcaggatactattagggatgccagcgtcatgggctttgtgtacgta
gcagaagtggatgaaacaaaacgaagattgaaggtcctggcacccatgaatactagaatg
accgacagaccaatgatctggggcagttggcctgaagtggctgtaagtctcatgggctaa

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