Pseudogulbenkiania sp. NH8B: NH8B_1845
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Entry
NH8B_1845 CDS
T01619
Symbol
cobD
Name
(GenBank) cobalamin biosynthesis protein CobD
KO
K02227
adenosylcobinamide-phosphate synthase [EC:
6.3.1.10
]
Organism
pse
Pseudogulbenkiania sp. NH8B
Pathway
pse00860
Porphyrin metabolism
pse01100
Metabolic pathways
pse01240
Biosynthesis of cofactors
Module
pse_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
pse00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
NH8B_1845 (cobD)
Enzymes [BR:
pse01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.10 adenosylcobinamide-phosphate synthase
NH8B_1845 (cobD)
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Gene cluster
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Motif
Pfam:
CobD_Cbib
IreB
DUF3099
Motif
Other DBs
NCBI-ProteinID:
BAK76661
UniProt:
G2J3L6
LinkDB
All DBs
Position
complement(1933786..1934724)
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AA seq
312 aa
AA seq
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MTSPVFLLLAVLLDKLFGEPPRWHPLVGFGKLVRWLERRLYPAAPAQETEQRMRLRGAIG
IALLLIPFTLLAALLAWLPFIGVFYSVVLLYLAIGAKSLTQHAEAVIEALERHDLPLARQ
RVGMIVSRDTSQLSKQDVARATIESVLENGSDAIFAALFWFLLLGAPGAVLYRLANTLDA
MWGYRNERYLHFGWAAARFDDVLNFIPARLTALTYIALGDRRAGWACWRAQAPTWYSPNA
GPVMAAGAGALGVALGGAASYHGQLKARPALGLERAPDCGDIRRAVRLVQRGLWLWVGIG
LLLALVTGGLNA
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
gtgacttcccccgtttttctgctgttggctgttctcctcgacaaactcttcggcgagccg
ccgcgctggcatcccctggtcggcttcggcaagctggtgcgctggctggaacgccggctc
tacccggccgccccggcgcaggaaaccgagcagcgcatgcgcttgcgcggcgcgatcggc
atcgccctgctcctgattccgttcaccctgctggcggcgctgctggcctggctgcccttc
atcggcgtgttctacagcgtggtgctgctctacctcgccatcggcgccaagagcctgacc
cagcacgccgaggcggtgatcgaggcgctggagcggcacgacctgccgctggcgcgccag
cgcgtcggcatgatcgtgagccgcgacacctcgcagctttccaagcaggacgtggcgcgc
gccaccatcgaatcggtgctggaaaacggcagcgacgccatcttcgccgcgctgttctgg
ttcctgctcttgggcgcgcccggcgcggtgctgtaccggctcgccaacacgctggacgcg
atgtggggctaccggaacgagcgctacctgcatttcggctgggcggcggcacgcttcgac
gacgtgctgaacttcattccggcgcggctcaccgcgctgacctatatcgcgctgggcgac
cggcgcgccggctgggcgtgctggcgcgcgcaggcgccgacttggtacagccccaacgcc
ggcccagtgatggcggccggtgccggcgcgctgggtgtggcgctgggcggtgcggccagc
taccacggccagctcaaggcgcgtccggcgctggggctggaacgcgccccggattgcggc
gacatccgccgcgccgtgcgcctggtgcagcgcggtctgtggctgtgggtcggcatcggc
ctgctgctggcgctggtgacgggaggcctcaatgcttga
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