Stutzerimonas frequens: DM292_16965
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Entry
DM292_16965 CDS
T05921
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
psed
Stutzerimonas frequens
Pathway
psed00730
Thiamine metabolism
psed01100
Metabolic pathways
psed01240
Biosynthesis of cofactors
psed04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
psed00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
DM292_16965
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
DM292_16965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psed03016
]
DM292_16965
Enzymes [BR:
psed01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
DM292_16965
Transfer RNA biogenesis [BR:
psed03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
DM292_16965
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
Rhodanese
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
AWT11774
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Position
complement(3607140..3608594)
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AA seq
484 aa
AA seq
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MKLIVKVFPEITIKSPPVRKGFIRQLAKNIRTVLRELDPEVRVEGVWDNIEVETTLSESK
PLREMIERLRCTPGIAHCLEVHEYPLGDLDDIVAKCKAHYAERLPGKIFAVRCKRAGKHP
FSSMDVERHVGSQLRQQCGASGISLKTPEVEVRMEIRDQRLFVVHEQHDGIGGYPLGALE
QTLVLMSGGFDSTVAAYQMMRRGLMTHFCFFNLGGRAHELGVMEVAHYLWKKYGSSHRVL
FISVPFEEVVGEILQKVDNSQMGVVLKRMMLRASTEIAERLHIDALVTGEAISQVSSQTL
PNLSVIDSATDMLVLRPLIASHKQDIIDTAFEIGTAEFAKNMPEYCGVISKNPTTRAKRY
RVEHEEKQFDMAILERALASARQVPIDRVIDELGEDIRVEEVSEATAGQVILDIRHPDAA
EDEPLELSGIEVQTLPFYALNNRFKELDENRQYLLYCDKGVMSRLHAHHLLSEGHVNVRV
YRPA
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgatcgtcaaggttttccccgaaatcaccatcaagagcccgccggtgcgcaag
ggcttcattcgccagttggcgaagaacatccgcaccgtgctgcgcgagctcgaccccgag
gtgcgggtcgaaggcgtgtgggacaacatcgaggtggaaaccacgctcagcgaatcgaag
ccgctgcgcgagatgatcgagcgcctgcgctgcacgcccggcatcgcccattgcctggag
gtccacgagtacccgctgggcgatctcgacgacatcgtcgccaagtgcaaggcgcactac
gccgagcgcctgccgggcaagatcttcgcggtgcgctgcaagcgcgccggcaagcacccg
ttcagctccatggacgtcgaacggcatgtcggcagtcagctgcgccaacagtgcggcgcc
tccggcatttcgctgaagacgccggaagtcgaagtgcgcatggaaattcgtgaccagcgc
ctgttcgtcgtccacgagcagcacgacggcatcggcggctatccactgggtgcgctggag
cagaccctggtactgatgtccggagggttcgactccaccgtcgccgcctatcagatgatg
cgccgcgggctgatgacgcatttctgcttcttcaacctcggcggccgcgcccatgagctg
ggcgtgatggaggtcgcccactatctatggaagaaatacggtagctcgcaccgcgtgctg
ttcatcagcgtgccgttcgaggaagtggtcggcgagatcctgcagaaggtcgacaacagc
cagatgggcgtggtgttgaagcgcatgatgctgcgcgcctcgaccgagatcgccgagcgc
ctgcacatcgacgcactggtcaccggcgaggcgatttcccaggtctccagccagaccctg
ccgaacctctcggtgatcgattcggccaccgacatgctggtactgcgcccgctgatcgcc
agccacaagcaggacatcatcgacaccgccttcgagatcggcaccgccgagttcgccaag
aacatgcccgaatactgcggcgtgatctcgaagaacccgaccacccgcgccaagcgctat
cgcgtcgagcacgaggaaaagcagttcgacatggccatcctcgagcgcgccctggccagt
gcccgccaggtaccgatcgaccgggtgatcgatgagttgggcgaagacatcagggtcgag
gaggtcagcgaggcgacggccggccaggtcatcctcgacattcgtcaccccgatgccgcc
gaggacgaacccctcgaactgtccggcatcgaagttcagaccttgccgttctacgcgctg
aacaaccgtttcaaggaactggatgaaaaccgccagtacctgctgtattgcgacaaaggt
gtcatgagccgcctgcatgctcaccatctgctgagcgaggggcatgtgaatgttcgcgtc
tatcgtccggcctga
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