Pseudodesulfovibrio sediminis: PSDVSF_12590
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Entry
PSDVSF_12590 CDS
T08380
Symbol
nifD
Name
(GenBank) nitrogenase protein alpha chain
KO
K02586
nitrogenase molybdenum-iron protein alpha chain [EC:
1.18.6.1
]
Organism
psef
Pseudodesulfovibrio sediminis
Pathway
psef00625
Chloroalkane and chloroalkene degradation
psef00910
Nitrogen metabolism
psef01100
Metabolic pathways
psef01120
Microbial metabolism in diverse environments
Module
psef_M00175
Nitrogen fixation, nitrogen => ammonia
Brite
KEGG Orthology (KO) [BR:
psef00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
PSDVSF_12590 (nifD)
09111 Xenobiotics biodegradation and metabolism
00625 Chloroalkane and chloroalkene degradation
PSDVSF_12590 (nifD)
Enzymes [BR:
psef01000
]
1. Oxidoreductases
1.18 Acting on iron-sulfur proteins as donors
1.18.6 With dinitrogen as acceptor
1.18.6.1 nitrogenase
PSDVSF_12590 (nifD)
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GFIT
Motif
Pfam:
Oxidored_nitro
HEPN_RnaseLS
Motif
Other DBs
NCBI-ProteinID:
BCS88017
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Position
complement(1324992..1326629)
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AA seq
545 aa
AA seq
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MAKTKKVVQFTATDIKEELLKKYPPKVARKRAKQIMINEATEAEPAPEIVANVRTIPGII
TMRGCTYAGCKGVIMGPTRDIVNLVHGPIGCSFYAWLTRRNQTDAGTDGENYMPYCFSTD
MQDQDIIFGGEKKLEAAIQEAYDLFHPKGIAVFATCPVGLIGDDIHAVAKKMKAQFGDCN
VFAFSCEGYKGVSQSAGHHIANNQVFTHLVGENEVAPEGEYKINLLGEYNIGGDGFEIDR
VFKKCGITNIATFSGNSSYDQFASAQHADLSCVMCHRSINYVADMLETKYGIPWIKVNFI
GAEATAKSLRKIAEYFGDKKLIDRVEAVIAEEMPEVLAVSEDVKTRTNGKTAMMFVGGSR
AHHYNELFQEMGMKTISAGYEFGHRDDYEGRQVIPDLKVDADSRNIEEITVVADEKLYNP
RKTPEEIKALEDAGYEFKHYDGLNPDMDKGSIIIDDLNQYEAEKLVELLKPDIFCAGIKE
KFSIQKLGVPMKQLHSYDSGGPYAGFKGAVNFYKEIDRLVNSKVWSYMKAPWQESPELTG
KFVWE
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggccaagacgaaaaaagtggtgcagttcacggctaccgacatcaaggaagagcttctc
aagaagtatcctcccaaagtagcccggaagcgtgccaagcagataatgattaacgaagcc
acggaggccgaaccggctcccgagattgtggctaacgttcggaccatccccggcatcatc
accatgcgtggttgtacctacgccggttgtaagggcgttatcatgggcccgacccgtgac
atcgtgaacctggttcacggccccatcggctgtagcttctacgcatggctgacccgtcgt
aaccagaccgacgcaggtactgacggcgaaaactacatgccttactgtttctcaaccgac
atgcaggatcaggacatcatttttggtggcgaaaagaagctcgaagctgccattcaggaa
gcctacgacctcttccaccccaaaggtatcgcggtgttcgcaacctgtcccgtcggcctc
atcggtgatgacatccacgccgttgccaagaagatgaaagcccagttcggcgattgcaac
gtgtttgccttctcctgtgaaggatacaagggcgtttcccagtccgctggtcaccacatc
gccaacaaccaggtcttcacccacctcgtcggtgagaatgaagtcgcccctgaaggcgaa
tacaagatcaacctgctcggcgaatacaacatcggcggcgacggtttcgaaatcgaccgc
gtgttcaagaagtgcggcatcaccaacatcgccaccttctccggtaactcttcatacgat
cagttcgcctctgcccagcatgccgatctgagctgtgtcatgtgtcaccgttccatcaac
tacgtggctgacatgcttgagaccaagtacggcatcccgtggatcaaggtgaacttcatt
ggtgccgaagccacggccaagtccctgcgcaaaatcgctgaatactttggcgacaagaag
ctcatcgacagagtcgaagccgtcattgccgaagaaatgcccgaagttctggccgtgtcc
gaagacgtcaagacccgcaccaatggcaagactgccatgatgtttgtcggcggctcccgc
gctcatcactacaacgagctgttccaggaaatgggaatgaaaaccatctccgccggttac
gagttcggtcaccgtgatgactacgaaggacgccaggtcattcccgatctcaaggtcgat
gccgattctcgtaacattgaagagatcaccgtcgtagccgacgagaaactttacaatccg
cgcaagactcctgaggaaatcaaggctctggaagacgccggttacgagttcaagcactac
gacggcctgaatccggacatggataaggggtccatcatcatcgacgacctgaaccagtac
gaagccgagaaattggtggaactcctcaagccggacatcttctgcgccggtatcaaggaa
aagttctccattcagaagctgggtgtgcccatgaagcagctgcacagctacgactccggc
ggcccctatgcaggattcaagggcgcagtcaatttctacaaggaaatcgaccgtctcgtt
aactccaaggtgtggtcttacatgaaggctccttggcaggagagtcccgaactcacaggc
aagttcgtttgggaataa
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