Pseudodesulfovibrio sediminis: PSDVSF_23900
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Entry
PSDVSF_23900 CDS
T08380
Symbol
deoB
Name
(GenBank) phosphopentomutase
KO
K01839
phosphopentomutase [EC:
5.4.2.7
]
Organism
psef
Pseudodesulfovibrio sediminis
Pathway
psef00030
Pentose phosphate pathway
psef00230
Purine metabolism
psef01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psef00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
PSDVSF_23900 (deoB)
09104 Nucleotide metabolism
00230 Purine metabolism
PSDVSF_23900 (deoB)
Enzymes [BR:
psef01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.2 Phosphotransferases (phosphomutases)
5.4.2.7 phosphopentomutase
PSDVSF_23900 (deoB)
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Motif
Pfam:
Metalloenzyme
Phosphodiest
DUF1501
Motif
Other DBs
NCBI-ProteinID:
BCS89148
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Position
2501090..2502310
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AA seq
406 aa
AA seq
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MARAFILVLDSLGIGWAPDAEKFGDAGADTLGHIAEVCARGGADMEGGRSGPLHLPCMSS
LGMGLAAQLVSGVVPPGLESPVLRGRFAAAREVSHGKDTPSGHWEMAGVPVRFDWGYFPP
EYPSFPEELIAALVEQGNLPGILGNCAASGTEIIAELGAEHMATGKPICYTSADSVFQIA
AHEDSFGLERLLELCILARTLLEGMNIGRVIARPFIGEPGAFTRTANRRDYSLPPPAPTV
LDRLKEAGREVVSVGKIADIFAHQGITKKVKAPDSDGLFDLLEEEVENAPDGSLTFVNFV
EFDSEWGHRRNVAGYATALENLDKRVSGLTGTLRPGDLVIITADHGCDPTWEGTDHTREC
VPVLLFGPGVLPGSAGMRTTFADVGQTVAEHLGIDPLPEGEAIPLS
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcgccttcattcttgtgctcgactcgctcggcataggctgggcgccggacgcc
gaaaaattcggtgacgccggtgcagacaccctcggacatattgccgaggtgtgcgccaga
ggcggggccgacatggaaggcgggcgatccggtccgcttcacctgccgtgcatgagctcg
ctgggcatggggctggccgcccagctggtctccggcgtggtgccgcccgggctggagtct
ccggttctgcgcggtcgtttcgccgcagcccgcgaggtcagccacggcaaggacaccccc
agcgggcattgggagatggcgggtgtgccggtccgtttcgattggggctacttcccgccc
gaatatcccagttttcctgaagagcttatcgccgcgctcgtggagcagggcaacctgccc
ggtatcctcggcaattgcgccgcctcaggcaccgagatcatagctgaactcggagcagag
catatggcgaccggcaagcccatctgttatacctcggcagattcggtttttcagatcgcg
gcgcacgaggattcctttggcctggaacggctccttgaactctgcatactcgcccgaacg
ctgctggaaggcatgaacatagggcgcgtcattgcccggcctttcattggtgaaccgggt
gccttcacccgcacggccaaccgccgcgactactccctgccgccgccggcacccactgtg
ctggaccggctcaaggaagcgggccgcgaagtcgtgtccgtcggcaagatcgcggatatc
ttcgcccatcagggcatcaccaaaaaggtcaaggccccggattcggacggattgttcgat
ctgctggaagaagaggtcgagaatgccccggacggctccctgaccttcgtgaacttcgtg
gagttcgactcggagtggggccatcgccgtaatgtcgcgggctatgcgaccgcgctggag
aatctcgacaagcgtgtgtccggcctgaccggaacattgcgtcccggggacctggtcatc
atcactgccgaccatggctgcgacccgacatgggaaggcacggaccatacccgtgagtgt
gtgccggtgctcctgttcggtcccggggtactccccggttcggcaggcatgcgcacgacc
tttgcggacgttggccagaccgtggcagagcatctcggaatcgatccgctgcccgagggt
gaagccatccccctgagctag
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